Ntra044511.1
Basic Information
- Insect
- Neocrepidodera transversa
- Gene Symbol
- Jra
- Assembly
- GCA_963243735.1
- Location
- OY725354.1:22826737-22827381[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 3e+03 -0.2 0.0 20 44 10 34 7 43 0.80 2 2 6.9e-15 1.4e-11 45.7 10.7 4 64 143 203 140 204 0.93
Sequence Information
- Coding Sequence
- aTGAGCCACGATCAAAATGCATCGTTTAGAAACATGAAACGAAATCTAACTCTAGActtaaaccagaaaaaattaaatgtacctCAAAATAATGGATTGTTGTCTTCCCCGGATTTGACTATGCTTAAAGTGGATACTCCCGAATTGGAAAATATGATTTTGGAAAATGGTATGGCAAATACACCGACACCGTCTTTGCTATTTCCGAAAAATGTAACAGCAGAGCAAGAGAGATTTGTAGGGGGTTTTGTTGAAGCTTTAAGCCACTTGCACAACAGCGTTTCTCAGCAAGGATCAGATAGTAATTCCAGCACTATCTATAATGACTCTTACATTCCTCACATTAAAGAAGAGCCCCAAACTGTGCCTAACATAAACCAAACTCCTCCCATGTCTCCTGTGGATATGGAATACCAAGAACGTATGAAACTAGAAAGGAAAAGACAACGAAACCGCCTGGCAGCATCGAAATGCCGATCTAGAAAATTAGAGAGGATTTCAAAATTGGAGGATAAAGtgaaattgcttaaaaatgaGAATGTAGAACTTGGTTCAATTGTAAATCAGTTAAAAGAAACTGTAGGTCTTCTTAAACTGGAAGTTTTAGAACACAATAAGGCTGGTTGTCCAATTATTATGTATtaa
- Protein Sequence
- MSHDQNASFRNMKRNLTLDLNQKKLNVPQNNGLLSSPDLTMLKVDTPELENMILENGMANTPTPSLLFPKNVTAEQERFVGGFVEALSHLHNSVSQQGSDSNSSTIYNDSYIPHIKEEPQTVPNINQTPPMSPVDMEYQERMKLERKRQRNRLAASKCRSRKLERISKLEDKVKLLKNENVELGSIVNQLKETVGLLKLEVLEHNKAGCPIIMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327607;
- 90% Identity
- iTF_00386933; iTF_00056298; iTF_00791829; iTF_00025784;
- 80% Identity
- -