Avir005595.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Jra
- Assembly
- None
- Location
- GWHAMMQ00000002:203949-205787[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5 3.7e+03 -2.0 0.1 20 36 10 26 9 29 0.81 2 2 9.5e-16 9.9e-13 47.9 9.9 4 64 143 203 140 204 0.93
Sequence Information
- Coding Sequence
- ATGAGCCAAGATCAAAATGGTTCTTTCAGGAACATGAAAAGAAATTTGACTTTAGATTTGAACCAAAGGAAATTGACTTTACCTACAAGTAGCGGTTTGTTGTCATCGCCGGACCTGAATATGTTAAAAGTGGATACTCCGGAGTTAGAAAATATGTTGTTAAATAGTAATATGACTAACACACCTACCCCTTCGTTACTTTTTCCTAAAACGGTCACTGCTGAACAGGAGAGGTTCGCAGGAGGTTTTGTTGAGGCTCTAAGTCATTTACACAACAGTAATTCTCAACAGGGTTCTGATAGCAATAGTAGTACTATATATAATGATTCTTACATTCCTCATATTAAAGAAGAACCACAAACGGTGCCTAATATCAATCAAACCCCACCAATGTCTCCTGTTGATATGGAATATCAAGAGAGGATGAAATTGGAAAGAAAAAGACAAAGAAATCGATTGGCAGCTTCCAAGTGTCGTTCAAGGAAATTGGAAAGGATTTCTAAACTTGAGGATAAAGTTAAAATGTTAAAAGCTGAAAATGTTGAACTTGGATCTATAGTAAATCAACTAAAAGAAACTGTTGGACTTCTAAAATTAGAAGTTCTAGAACATAATAAGGCTGGATGTCATATAATTATGTATTAA
- Protein Sequence
- MSQDQNGSFRNMKRNLTLDLNQRKLTLPTSSGLLSSPDLNMLKVDTPELENMLLNSNMTNTPTPSLLFPKTVTAEQERFAGGFVEALSHLHNSNSQQGSDSNSSTIYNDSYIPHIKEEPQTVPNINQTPPMSPVDMEYQERMKLERKRQRNRLAASKCRSRKLERISKLEDKVKMLKAENVELGSIVNQLKETVGLLKLEVLEHNKAGCHIIMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327607;
- 90% Identity
- iTF_01046861;
- 80% Identity
- -