Basic Information

Insect: Neocloeon triangulifer
Gene Symbol: L
Assembly: GCA_031216515.1
Location: JASKYO010000013.1:15684444-15689976[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.54 32 5.1 5.8 1 23 3 25 3 25 0.97

2 18 4.8e-07 2.9e-05 24.2 2.2 1 23 31 53 31 53 0.99

3 18 0.0013 0.077 13.4 0.2 1 23 59 81 59 81 0.98

4 18 0.085 5 7.7 3.7 1 23 252 275 252 275 0.94

5 18 0.05 3 8.4 4.9 1 23 319 341 319 341 0.96

6 18 0.0068 0.4 11.1 0.3 1 19 368 386 368 390 0.93

7 18 0.00021 0.013 15.8 0.8 1 23 398 421 398 421 0.94

8 18 0.83 49 4.5 0.1 1 23 426 449 426 449 0.90

9 18 0.0057 0.34 11.3 0.4 2 23 494 516 493 516 0.90

10 18 3.6 2.1e+02 2.5 4.2 1 23 520 543 520 543 0.94

11 18 3.2e-05 0.0019 18.4 2.0 2 23 566 587 565 588 0.94

12 18 0.0022 0.13 12.7 0.5 1 23 605 628 605 628 0.92

13 18 0.45 27 5.4 0.5 2 23 636 657 635 657 0.96

14 18 0.21 12 6.4 0.4 2 23 715 737 714 737 0.93

15 18 2.4 1.4e+02 3.1 0.2 1 23 743 766 743 766 0.88

16 18 0.027 1.6 9.2 0.2 2 23 773 794 772 794 0.95

17 18 0.00011 0.0066 16.7 0.1 1 23 802 824 802 824 0.97

18 18 0.0071 0.42 11.1 3.1 1 23 831 853 831 853 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.54	32	5.1	5.8	1	23	3	25	3	25	0.97
2	18	4.8e-07	2.9e-05	24.2	2.2	1	23	31	53	31	53	0.99
3	18	0.0013	0.077	13.4	0.2	1	23	59	81	59	81	0.98
4	18	0.085	5	7.7	3.7	1	23	252	275	252	275	0.94
5	18	0.05	3	8.4	4.9	1	23	319	341	319	341	0.96
6	18	0.0068	0.4	11.1	0.3	1	19	368	386	368	390	0.93
7	18	0.00021	0.013	15.8	0.8	1	23	398	421	398	421	0.94
8	18	0.83	49	4.5	0.1	1	23	426	449	426	449	0.90
9	18	0.0057	0.34	11.3	0.4	2	23	494	516	493	516	0.90
10	18	3.6	2.1e+02	2.5	4.2	1	23	520	543	520	543	0.94
11	18	3.2e-05	0.0019	18.4	2.0	2	23	566	587	565	588	0.94
12	18	0.0022	0.13	12.7	0.5	1	23	605	628	605	628	0.92
13	18	0.45	27	5.4	0.5	2	23	636	657	635	657	0.96
14	18	0.21	12	6.4	0.4	2	23	715	737	714	737	0.93
15	18	2.4	1.4e+02	3.1	0.2	1	23	743	766	743	766	0.88
16	18	0.027	1.6	9.2	0.2	2	23	773	794	772	794	0.95
17	18	0.00011	0.0066	16.7	0.1	1	23	802	824	802	824	0.97
18	18	0.0071	0.42	11.1	3.1	1	23	831	853	831	853	0.97

Sequence Information

Coding Sequence: ATGCCGTTCAGGTGCGAATTCTGCTCGCGCCTCTTCAAGCACAAGCGGAGCAGGGACCGCCACGTCAAGCTGCACACCGGAGACCGCAAGTATCGGTGCAACCAGTGCGAGGCCGCATTTTCcagaagTGATCATCTGAAGATCCACATGAAGACGCACGACACGCAAAAGCCGTTCCAGTGCTCGGCGTGCAACCGCGGCTACAACACGGCGGCCGCGCTCACGTCGCACTCGCAGACGCACAAGCGGCCGCCGTCGCTGCCCGCCTCGCTGCCTCCTCGCAACAGCCCAAGGCAGAGTCCGCCCTCGGCGCCCCCTCGAAGGGTCACTCCGGCCCCAAGTCCGGCCGCCCCCGCGTTTCCGCGCAACCTCACGCCCACCCACCACCCGCACGACCTGCTCAGGGCCGCGCACCCTGCGGCCGCAGCTGCGGCCGCCGTGCTCTTCAACAGGGAGCTGCAGCAGGTGTTGCAGCACGAGGCCAGCTCGCCGCCGGGAAGCGCCAGGAGCGCCCTGAACGCGGCGGCCATGGCCGCGGCCGCGCTGGCCCACTCGGCGGGCCTCCAGTTCCCGACGCCCACCCTCGCTTGTATTTACTGCACCAAGGACGGCTTCACCAGCATGGAACAACTGCAGCTCCACGTCCAGGCCATGCATgGTTCAATTCTGAACGGCGAACGCGAATATCAGCCGCCGTCCCCAGGGCATCACCTGAGCAGCGCCCGGCAGCCGCCCGTGAGTCCCAGCCAGCCATACACGTGCGACTTCTGCACGATGAAGTTCGACCACGTGCAGAGCCTGCACAAGCACACCCTGGCCGTTCATGCTATGTCCCCTGCCACCGCTTTTGGCGCCGACGTCGCCGAGCAGCTCAAGCCGACCGACCTGAGCATCAACGGAAAAAGCAACGGCAAGTCGCCGGCGCGCCCCAACGACACCCTGTCGCAGAGCACGTACCTCTGCAACCAGTGCAACGCCCACTGTCCGGACTTTGAGTCCTTCCGGTCGCACCAACGGACGCACCTGGACGCCGAGCACGGCAAGAGCAGCCCGCCCAAAGCGCCGCGGCAGCCGAACCACGCGGCGCCGCCGACGCCGCTTTTCCAGTGTCCGGAATGCTCCGAAGGCTTCCCCAATGAGAATCTGCTCGAGGTGCACTGCCTGGGCCACTTCCTCACCACCACCACCGAGTTCTCCTGCCAGAGCTGCCTCAAGTCCTTCCAACGACCCGACGAGCTGCAGAAGCACCTGATGGACTCGCACTCGCATCAACTGTTCCGGTGCGCCCTGTGCCGCGAAATCTTCGACTCGCGCGTCGCCGCCCAGGTGCACTTCGCCGTCAAGCACAGCACCGAGAGTCGCGTCCTGCGCTGCGTCGCCTGCGGAGAAAACTCGGCCAAGTTCCGTTCGGAGATCGAGTTCAGCCTGCACGTCAAGATCCACCACCTGTCGCTGATGGAGAAGCAGCAGACGCCGTTGCGCTGTTTGTACTGCAACGAGTTCTTCAAGTCGGAGGCCGAGCTGCAGTACCACGCGGCCAACTTCCACCAGAAGCTGTACCGGTGCAAGTTCTGCGACGACGCGTTCCACGTCGAGTTCCAGCTGGACAAGCACCTGGAGCACAAGCACAAGGAGGAGACGGGCAAGAAGTCGCCGCCGAAGCAGCAGCTCAAGTCGCCGGTGCAGGTCAGCCTGGTGTGCGCGTATTGCCAGGAGTCGTGCAAGTCGCGCGCCGACCTCGAGGCGCACATGAAGACGCACCACCAGACGCGGCCCTCGACCAACGGAACCAACGGCGTGCCCTTGGGACGCCACAAGTGCAACATTTGCGACATGGTGTGCGTGACCCCGGCGCTGCTGGCCGAACACAAACTGGCCACGCACTGCAAGGTGCTGCACGGCGACACGTGCAGCGTGTGCAAGGCCAGCATCGGCGGCGAGGAACACTTCCTCAGCCACATGCAGAAGCACTGTCCGGGCAGCGGCTCGGCCGACATCGGCTTGCCCACGGCCTGCATCATCTGCAGACAGACCGTCACCTCGGAGCACGAGGTGCAGCTGCACGCCAAGTTCCACCTGCagcagaagcagcagcagaacAACCACCCCTCCGCAGGTGGGGTGTATCCGAAGGAGCAGCTCGAGTGCAAGGAGTGCTCCGGACGCTTCGACTCGGTCAACGAACTCGAGTCGCACTTTTCCAAGTACCACCTGCGCAAGAACTCGTTCGAGTGCATCTCGTGTCAGCTCAGCTTCCACACAGAGGCCGAGGTGCGCAACCACGTGGAGGTGGCGCACGCGCCCGACAGTGGGCAGCGGTGCCGGCTGTGCCAGGAGTCGTTCGACACGCCCCTGCGGCTGCAGGTGCACCTGATCGAGCACACCTTTGTCGGGTGTCCGACCTTTGCGTGCTACCTGTGCGGCGCCGTGTTCACGGCCGCCACCGGGCTGCAGCGCCACATGAACAGCCACGGCGCCAGCAACAAGCCGTACGACTGCTCCAAGTGCCACCTGCGCTTCTTCTTCCGCGCCGAGCTGGAGAATCACCAATTCGTGCACGTCGGCGAGGAGATGATGCTGGACAAGAAGCAGTTGAAGGAGGAGGAGGACGATCACCGCTCGGAGGACGAGCAGAACGAGGCCATCTCGCTGACCCTGCGCAAACGCAAGGGCGAAATCAACGGCAACGAAATCAGCAACGGCGGCGCCATCGTGGACCCCGGCGCCGCCGAACTGGAGCTCAAGAAGTTGAAACTCGAGGCGCCCGAAGAGACGCAGGCCGCCTCGTAA
Protein Sequence: MPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCNQCEAAFSRSDHLKIHMKTHDTQKPFQCSACNRGYNTAAALTSHSQTHKRPPSLPASLPPRNSPRQSPPSAPPRRVTPAPSPAAPAFPRNLTPTHHPHDLLRAAHPAAAAAAAVLFNRELQQVLQHEASSPPGSARSALNAAAMAAAALAHSAGLQFPTPTLACIYCTKDGFTSMEQLQLHVQAMHGSILNGEREYQPPSPGHHLSSARQPPVSPSQPYTCDFCTMKFDHVQSLHKHTLAVHAMSPATAFGADVAEQLKPTDLSINGKSNGKSPARPNDTLSQSTYLCNQCNAHCPDFESFRSHQRTHLDAEHGKSSPPKAPRQPNHAAPPTPLFQCPECSEGFPNENLLEVHCLGHFLTTTTEFSCQSCLKSFQRPDELQKHLMDSHSHQLFRCALCREIFDSRVAAQVHFAVKHSTESRVLRCVACGENSAKFRSEIEFSLHVKIHHLSLMEKQQTPLRCLYCNEFFKSEAELQYHAANFHQKLYRCKFCDDAFHVEFQLDKHLEHKHKEETGKKSPPKQQLKSPVQVSLVCAYCQESCKSRADLEAHMKTHHQTRPSTNGTNGVPLGRHKCNICDMVCVTPALLAEHKLATHCKVLHGDTCSVCKASIGGEEHFLSHMQKHCPGSGSADIGLPTACIICRQTVTSEHEVQLHAKFHLQQKQQQNNHPSAGGVYPKEQLECKECSGRFDSVNELESHFSKYHLRKNSFECISCQLSFHTEAEVRNHVEVAHAPDSGQRCRLCQESFDTPLRLQVHLIEHTFVGCPTFACYLCGAVFTAATGLQRHMNSHGASNKPYDCSKCHLRFFFRAELENHQFVHVGEEMMLDKKQLKEEEDDHRSEDEQNEAISLTLRKRKGEINGNEISNGGAIVDPGAAELELKKLKLEAPEETQAAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00344573;
90% Identity: -
80% Identity: -