Ntri006791.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- -
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000011.1:3381327-3385351[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.47 4.8e+02 0.8 0.1 25 40 67 84 54 88 0.76 2 11 0.13 1.4e+02 2.5 0.7 15 44 181 207 171 207 0.84 3 11 0.0039 3.9 7.4 0.1 17 43 354 377 349 378 0.90 4 11 0.04 41 4.2 0.0 17 38 421 439 416 439 0.81 5 11 0.012 12 5.9 0.0 10 28 481 497 478 504 0.82 6 11 0.0015 1.5 8.8 0.5 19 44 568 590 558 590 0.91 7 11 3.1e-06 0.0032 17.3 1.0 17 44 655 679 648 679 0.92 8 11 0.022 23 5.0 0.2 15 29 706 720 695 729 0.83 9 11 0.76 7.8e+02 0.1 1.6 19 44 813 835 807 835 0.71 10 11 0.025 25 4.8 0.3 18 28 868 878 849 890 0.83 11 11 0.018 19 5.3 0.1 12 41 910 936 906 940 0.81
Sequence Information
- Coding Sequence
- ATGGGGTCCGACATGATGAGTCTCTGTCGGCTCTGTCTCATGGAAAACACCATCATGTTGCCAATCTTCGGCGAGGATGGCAAACACCGCAGAATCAGAGAAATGATCAAAGAATCGCTCAACATCGCGTTGTTCCAGACAGACCCTCTGCCCAGAAAAATCTGCTGCAAGTGCTACTTCAAGCTGCAACAAGCCAATGAGTTGAAGTCGGACTGCCAAAAGAGCACCAAGGTCCTCATCAACCACATGAATGCACAGCGTTCGGCTGACGCTGCCAAAATGATTAAGACACTCAACTATCAattgcaaataTTGCACGGAAATGCGCCTCCTGGTGAACCTCAGAAGGAACCTGAAGCTTTTGGTCCATCCAGAGTCGTCGTTGCCTCTGCCAGTGGCGGCGTTGGGTCCTCAAGCACCAACCACTTCCCACAATCAATCAGGCCTGCTATTCACACCCCCTCAACCTCAAACCAACAACAAATGAGAAACCTCTATCGAGTTGTGCCTTCGAGTCGCATGAAATTCCGGCTACGCAAGCCATCCGTACCGTGCGGAGTGTGCGGCAAGCTTTTCTTGAGCAAGAAATCAGCGAGCGCACATATGCACAAAAACCACTCTATTGATGAGGTCAACAACATTTGCACAAACTACAAGTGCACGGTTTGCTTCCGTGGGTTTGAAACATTGattggattaaatttgcaCAGGCACCGCAATCATCGCCTACCCCCGTTTAGCAGTGTACACCGAGGAGCCGGCACTCAGGCCCGGTCAGTACAGCAAATGCAGCAGCAACGCCAAGCAGCATCGTCGACAGCACTGCAGCCACAGGTGCAGCTTGCGCCAGTTCATACGCCTCGACTGATTTTGCCTAAAGACCCCGAGCAAAAGTCCGACACTCATGAGTGTCATCTTTGCTTCCGAATCTGCAAAAGTGaaggaattttgaaaatgcacaTTGCCACGGTGCataaggaaataaattcagcGGGTCAAAGACTCAGCATCGATGCTGGACCCGAGGCAGCTTCGTCCGAAAACCCGGCTTTGGATAACCTCAAGTGCTCCTTGTGCCATCAGCCATTCCGTAATGTCAACGGCCTAGTGGGTCATCTACGAACGGCCCACGGTAAACCAAGCTGTGCTATCTGTCTGGAAATATTCTCCACCCAGGAAGATTTGAACGCCCACAGGCAGACACACAAGCCTGGGTATAGCGAGCAGCAGGCGGAGAAGAAAATCCCACCACCGGACGTTTTCACTTGCCCCATATGTGGCAAGTCCTTTGACAACTCCACCTCACTGTCTAGACACAAGGGCTACCACACCAAAATGGGCCCGAATTGGTCTCCAAGTGTTGGGTCAACCTCAAATTCCACTGTGTCCTCACCTACACCAAAATCGACAACTTATCGTCAGTCTATTATTGAATCAGAAAGTCCAAGGAAGGTCTTTACATGTGACATATGTGGAAAGAAGTTTGACAACAATTTGTCTCTTGCTCGGCATAGGGCTTGCCATGCCAAATATGGTGCCCAAAGGTCGCTGATTCCTCCCCAGAGGCAAATTTCCCCACCCAAACCGGCATCAGATGACTACGAACCGGTGGAAAAGAAGCCTGTCCTCGATGACCAGGGTAAAATTGTGGACAGAGTATCCTTGCAGAAACTGAAAAGCAACTCCACCACAATACCATTCTGCCTGTACTGCAAAAAGATTTACGAATCGCAGGACAAACTCTGGGAGCACATCTGCACCATGCACCCAAACGATCCAAGGTACCGCTGTCAGGATTCGGGCTGCCTTCGGGTTTTCTTCAGTGGTACAGGTTTCCGGAGCCACCAGACGGCACAGGGCCACAACGCGCCACCCGAGACAGCCAACAGCAACAAGTCTGTCGATAGTGGCCCCAGCATGGTGTTCCTCAGCTCCGACACATCCCCTGTTGtaggcagcagcagcaagtgCCAGATTTGCATGCGAAAGTTTTCAAACATCAACAACTTGCGGCGGCACATCAAAATGGCGCACAGAAATCAGTCGAGCTTTATGTCCAAGCAGATTGTCCGACACAATCCCTCCTCGATTGCCTCCATGTATGGCAGGAAAATTGGGCGTGTACTTTGTCGATACTGTCCCAAATATCTTAGCTCCAAGTACATAAGCGAGCATGAAAAGATGCACAGAATTCGTGGAGACAAACCCAGAGCGGCCAGGGACAATGGTCAACAGTCGCAAGAAGTAGAGGGTCCGTCCCAAGTTGACGAAGGAGAGGGCAATTTGGGCATGGAGCCCGAGGAAGATTTGGAGGAAGACGAAGAACAAGAGGATACCCCAATAAACTCCTCTTTTGAGATGGACATTCCAGACTCGATAACGATGACACAAAATCAagacttcaaattaaacaggAAAATTCCCAGAGCCCCCAATTGCAAGTACTGCGGTCACACTGCGCTTTCCTTCTACGAGCTGCAGGAGCACCTCGACTCCAACCACCCAGGCCAGATTTATTACGTGTGTGAAGGCTGCCCTGAAATTTACTTTGACCGGAAAACCCTCGTGAGCCACAACATTGTGCATACTCGAGTGTACCTCAACTGCAAATATTGCAACAAGAGCTTTGCTCGGCCATTAGCGTTGCGGGGCCATGAGAACCGGTGCCTGTACTTGCAAAAGAAGCAGCAAGGACTTATGCCTGAGAGTGGCGAGGGTGCATCGTCGTCCACTTCCTATTCCTACACTTGCGAATTCTGTAATGATAAGTTCAATGATTCCATCACATTTGTGCAACATTTGCAGACTCATGCGACAACAAACTAG
- Protein Sequence
- MGSDMMSLCRLCLMENTIMLPIFGEDGKHRRIREMIKESLNIALFQTDPLPRKICCKCYFKLQQANELKSDCQKSTKVLINHMNAQRSADAAKMIKTLNYQLQILHGNAPPGEPQKEPEAFGPSRVVVASASGGVGSSSTNHFPQSIRPAIHTPSTSNQQQMRNLYRVVPSSRMKFRLRKPSVPCGVCGKLFLSKKSASAHMHKNHSIDEVNNICTNYKCTVCFRGFETLIGLNLHRHRNHRLPPFSSVHRGAGTQARSVQQMQQQRQAASSTALQPQVQLAPVHTPRLILPKDPEQKSDTHECHLCFRICKSEGILKMHIATVHKEINSAGQRLSIDAGPEAASSENPALDNLKCSLCHQPFRNVNGLVGHLRTAHGKPSCAICLEIFSTQEDLNAHRQTHKPGYSEQQAEKKIPPPDVFTCPICGKSFDNSTSLSRHKGYHTKMGPNWSPSVGSTSNSTVSSPTPKSTTYRQSIIESESPRKVFTCDICGKKFDNNLSLARHRACHAKYGAQRSLIPPQRQISPPKPASDDYEPVEKKPVLDDQGKIVDRVSLQKLKSNSTTIPFCLYCKKIYESQDKLWEHICTMHPNDPRYRCQDSGCLRVFFSGTGFRSHQTAQGHNAPPETANSNKSVDSGPSMVFLSSDTSPVVGSSSKCQICMRKFSNINNLRRHIKMAHRNQSSFMSKQIVRHNPSSIASMYGRKIGRVLCRYCPKYLSSKYISEHEKMHRIRGDKPRAARDNGQQSQEVEGPSQVDEGEGNLGMEPEEDLEEDEEQEDTPINSSFEMDIPDSITMTQNQDFKLNRKIPRAPNCKYCGHTALSFYELQEHLDSNHPGQIYYVCEGCPEIYFDRKTLVSHNIVHTRVYLNCKYCNKSFARPLALRGHENRCLYLQKKQQGLMPESGEGASSSTSYSYTCEFCNDKFNDSITFVQHLQTHATTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01046586;
- 90% Identity
- iTF_01046586;
- 80% Identity
- iTF_01046586;