Ntri004727.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- bab1
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000007.1:3319409-3321332[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-18 9.5e-15 53.9 0.0 1 43 28 71 28 73 0.95 2 2 1.1 1.5e+03 -1.2 0.9 6 15 171 180 170 184 0.88
Sequence Information
- Coding Sequence
- ATGTGGCAGAAATGCTGGAACACAAACCAGAGCCTGGTGCACAACCTGCGTTTCCGCGAGCGCGGCCCCCTCAAGTCATGGCGGCCAGAGACGATGGCCGAGGCCATCTTCTCGGTGCTGAAGGAGGGCCTGTCGTTGTCGCAGGCGGCCAGGAAGTACGACATCCCGTACCCGACGTTCGTCTTGTACGCCAACAGGGTGCACAACATGCTCGGCCCGTCGGCCGACGGCGGTGCAGATTTGCGGCCGAAAGGTCGAGGTCGTCCTCAACGCATTTTGCTCGGCGTTTGGCCGGAAGAGCACATCCGCGGTGTGATTCGCGCCGTCGTTTTCCGCGACCCGGCCCACATAAAGGAAGAAGCCCAGACTTTAGCTAGactgtACTGCATGCAAGACCCAATGGCGCAgtcacagcagcagcagcagcaaccctTTCCGAACCTGGCCCCGAACGGTTCGATGCCCGACGGCGGCGGCCGTTCGGTCACGCCCACGCCCAGTTCTGCGGCGGCCGCCGCAGTGGCCGCCGTGGCCCAGGGCCTGAGGCAGCAAATGTGCGGTCTGGCCGCGCCCGGCAGCGAGGCCGGCGGCCAGCAAGGGCCGTCGAGCGCGGCCGTGGCCGCGCTGGCCTCTGCGCTGCTGGGCCGCGACGCCGCCGACAACATGCACCAGGCGGCGGCCACCGCGCTCAACAACAACACGATGAACGCGCTGCTGAACAACGgcaccggcggcggcggcctccGCGGCCACCCCGCCAGCATGGCCGCCCTGACCAACCTGAGCCAATACAAGCAGCACTCGTTGTTCGGGCAGACGCGGCCGTCCGAGGTGATGTACCAGGAGCACGAGTCGGCGGACGAACAGGCCAAGAGCAATCACCACCAGCACCACCCGATGGACGGCGTCGACGAAAACGACGGGCTGCACCATCAGCAGGTCAAGCCCATGGACAGCACAAACGCGGCCGTGCTCGACGCCCGAGTCGAGTGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPEEHIRGVIRAVVFRDPAHIKEEAQTLARLYCMQDPMAQSQQQQQQPFPNLAPNGSMPDGGGRSVTPTPSSAAAAAVAAVAQGLRQQMCGLAAPGSEAGGQQGPSSAAVAALASALLGRDAADNMHQAAATALNNNTMNALLNNGTGGGGLRGHPASMAALTNLSQYKQHSLFGQTRPSEVMYQEHESADEQAKSNHHQHHPMDGVDENDGLHHQQVKPMDSTNAAVLDARVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00344142;
- 90% Identity
- -
- 80% Identity
- -