Ntri008646.1
Basic Information
- Insect
- Neocloeon triangulifer
- Gene Symbol
- E2F8_1
- Assembly
- GCA_031216515.1
- Location
- JASKYO010000012.1:1095500-1097195[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-20 8.2e-17 60.6 0.0 1 65 38 106 38 106 0.91 2 3 1.2e-14 5.1e-11 42.0 0.0 1 57 192 258 192 264 0.90 3 3 0.25 1e+03 -0.6 0.0 15 34 354 373 349 389 0.82
Sequence Information
- Coding Sequence
- ATGTCTGAAGAGATTTCGTCATCGGCAAAAACGACGACGCCGCCAATGGTGCTGACCACACCTCTCTTGCTCCTGAGCACCATCGAAACCAAGGATGATGCCAACCTGCGGAAGAACAAGTCCCTCTTGGCCATTTGCAAAAAGTTCTTGGAGTTTTATCCGTTGGACCTGCAAGCCGGATCAAGCATGGATATTCCGCTTGAGGTGCTGGCGGACAAGCTGGGCCTCAGTAGAAGAAGGCTCTACGACATCATCAATGTAATGGAAAGTCTGCAAATGGCAGTTAAAGTTACCAAAAACTTGTACCGGTGGTACGGACTTCGTAACGTTAAGCGTCTGCTGAACGAGCTGAAGCAACTTTCCGACCAGAACAGGCTGCAGGAATTGGATAATTTGGAGCAGGGATATGTGTCCGGCAGCTCCACTGGAGAACCACCAACGACCCCTACAGATTCTGAATCGGCACGAGAATTGCTGCTGCAGACTTTGTTGAAGGAGAAGACTGTGAGGAAGAGGTCCTGCGTCTTATCAGGATTAAAAGAGTCTCCGGAGCCTAAAGGACCTCACACGTGGAAAAACAAGTCTTTGGGAGGAACCTGCCTCAAGTTTCTGACTCTATTTTTCAAGCACgagACTGTCAGTTTAGAATGGGCTGGGAAGGTGCTATTGTGCGGAGAGGACGAAGACAATGCAAAGCAGTTGAGAAATAAGGTGCGTCGAATCTACGATGTCGCTAACGTGTTGTCTGCTCTTGGTCTTGTCTGCAAAATTACACCCAAAGACAGCCTTCGACGCAGACTCTTCTACGGATACTGCGGCCCAGCCATTGACAATCTCCACTCGGGAGAGAAAGTTTACGTTCAACCCTCTGAACCGCCAATGCCTGGTAGGCGCATAAGAAATTCCTCTTTGACTCCGTTGGAGCCGAAAGCTGGAGGGGATGGAATTTGCAAAAGGAAGCTCATGCTGGGTTCGGAAAATGgaCCGAATGAGAGTAAAAAGCTGTTGAAAGAGGAAGATTTAATTCTGGGGACCAATGACCTGTCGGCCTTCAGCATTCTTCTGGCTGTGGCGGAAAATGAGAGACTGCAGCTGGAGCGAGCGGCAAATGAGATCAACTCAAAGGCCAGTGAGGAAAAGGAGATTGACCTCCTGTGCTCGGAAAACCAGTTGTCCACCAAAGATCTCGAGTACATTGAAAACCGTGACCACCTCGAAGGGGATGGCAATGGCGGCAGGTCTGCACTCCGGAGCCTCCTTGAGACCAACCAGCCTCCTAAGGTGGTCGTCTGCCCGGAACCAAGTGGCCCCAAGGAGTCGCTGCTGATCAAGAACGGTGGCCAGATGCTTCGGAAAACCCAACTGAGCATTCCCTTCCGGACAAACGGTCCCGAAGTCGTGGGCAAATGCTCAAGTCTTTAA
- Protein Sequence
- MSEEISSSAKTTTPPMVLTTPLLLLSTIETKDDANLRKNKSLLAICKKFLEFYPLDLQAGSSMDIPLEVLADKLGLSRRRLYDIINVMESLQMAVKVTKNLYRWYGLRNVKRLLNELKQLSDQNRLQELDNLEQGYVSGSSTGEPPTTPTDSESARELLLQTLLKEKTVRKRSCVLSGLKESPEPKGPHTWKNKSLGGTCLKFLTLFFKHETVSLEWAGKVLLCGEDEDNAKQLRNKVRRIYDVANVLSALGLVCKITPKDSLRRRLFYGYCGPAIDNLHSGEKVYVQPSEPPMPGRRIRNSSLTPLEPKAGGDGICKRKLMLGSENGPNESKKLLKEEDLILGTNDLSAFSILLAVAENERLQLERAANEINSKASEEKEIDLLCSENQLSTKDLEYIENRDHLEGDGNGGRSALRSLLETNQPPKVVVCPEPSGPKESLLIKNGGQMLRKTQLSIPFRTNGPEVVGKCSSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -