Nasi009192.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- nfxl1
- Assembly
- GCA_030068015.2
- Location
- CM061526.1:87846877-87850233[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.5 1.6e+04 -3.8 2.1 15 19 173 177 172 177 0.82 2 20 0.13 1.4e+03 -0.3 0.4 4 10 208 214 207 214 0.95 3 20 5.5e-09 5.8e-05 23.2 15.1 1 19 222 239 222 239 0.98 4 20 1.5 1.6e+04 -3.7 1.1 5 10 264 269 264 269 0.91 5 20 1.1e-06 0.011 15.9 13.5 1 19 275 294 275 294 0.94 6 20 0.36 3.8e+03 -1.7 0.3 5 10 318 323 318 325 0.89 7 20 1.1e-07 0.0012 19.1 13.3 1 19 329 347 329 347 0.92 8 20 1.3 1.4e+04 -3.5 0.4 1 8 372 378 372 379 0.59 9 20 7.5e-08 0.0008 19.6 10.6 1 18 382 399 382 400 0.96 10 20 0.22 2.3e+03 -1.0 0.5 1 5 409 413 409 418 0.75 11 20 2 2.1e+04 -5.0 2.3 5 10 423 428 423 428 0.91 12 20 1.4e-05 0.14 12.4 15.3 1 18 434 452 434 453 0.95 13 20 2e-07 0.0021 18.3 14.0 1 18 462 479 456 480 0.86 14 20 0.006 64 4.0 6.1 9 18 525 534 523 535 0.89 15 20 0.05 5.4e+02 1.0 4.7 4 11 548 555 545 556 0.89 16 20 0.89 9.5e+03 -3.0 1.4 6 10 616 620 615 620 0.88 17 20 1.8e-06 0.019 15.2 6.1 1 12 626 637 626 637 0.97 18 20 1.9 2e+04 -4.0 0.9 5 10 652 657 652 657 0.84 19 20 0.0032 34 4.8 17.3 3 18 666 681 665 682 0.93 20 20 1.6e-06 0.017 15.4 13.3 1 16 733 747 733 753 0.92
Sequence Information
- Coding Sequence
- ATGTCTTATTCTTCAACGAACAAcgaaaaaatgaaggaaaacttTAAAGCAAATAAACCAAAACTAAATGGAGTGAAACGCTTTGAAGAAGAGCATGCCAAGAATATAGCAGCGGCTAAGAAAAGAGTGGAAAAGTATTCCTCCAGCTCTGATGAAGATGAGGAAATTAATGAAACCAAAATTCTTGATACTCTATTTAAGCATTACAAACTTAACACTAGCTCGCCGGATACCACAACAGcattacaacaaaaaactgCAAGCTTCCTTGAAAACGCGTTGCACTCGGGCTCTGCAACTTGTGTAATTTGCATTGGGAGCGTGCGTCGTTCTGATTCAATATGGACATGtaaacattgtttttgtttctttcatttGAATTGCATACGCCGGTGGGCCAATGATAGTATCGCACAAATGAAAGCCAAATATGAGCACACTTCTAATGATCAGGGTTACTATAATAATCTCGGACAGTTTGTACCACCGAAACGCAAAGGGCCATTATATTGGAGTTGTCCACAATGTCGTAAAGATTACACGATTGAAGAGAGACCAAACACTTATAAGTGCTTTTGTGGAAAGGAGACAAATCCGCAACAGGTACCGTTTTTGTTACCACATTCATGCGGAGAAATATGCGGCAAAAGCTTAAAACCAACTTGTGGTCATACTTGTATGTTGCTATGCCATCCAGGCCCTTGTCCGCCTTGTTCTCAATATGCAAATACTAGTTGTCTATGTGGACAGTCAAACAAAATATCTATACGGTGTGTAGATAAGGAGTGGAAATGTGACAGAAagTGTAACAAATTGCTACCGTGTGGTCAGCATAAATGCAAAGCATTATGCCATAAGTCTAACCAGTGTCCTCCATGTACGAACACTAGTTTACAGCCATGTGAATgtgaaaatgaaacgaaaaaacgAAACTGTTCTGAACTCAAGTGGAATTGTAAAAAGGTTTGCGGCTCAAAATTTTCATGTAACGCTCACACTTGTAAACGTGTTTGTCACTCAGGCCCTTGTGGTGATTGTCCTTTAAGTTTGCCGCGCTCATGCCCATGTGGTAAAACTCAAAAAATTGTACCATGCACTGAAATCATTGATTCTTGTGGCGATACTTGTCAAAAACTTTTATCCTGTGGCCTACATACTTGTACGCAACGTTGTCATCGAGGCGAATGTAATTTAtgtttaattataacaaaaaagaaatgtcgCTGCGGAATTCATGAAAAAGAATTGCCTTGTTGGAAGAACTTTACATGCGAAACCAAATGCAAACGAATGCGGGATTGTGGAAAACACACTTGCAATAAAAAGTGTTGTGATGGTCAAATGTGTCAGCCTTGCGATAAAGTTTGCGGTAAACCACTAACTTGCCAGAAACATAAGTGTCAGTCTGTTTGCCACGAAGGTCTCTGTTATCCTTGTAACCAACAATCGCAGGTGAATTGTCGTTGTGGTAAGACGTCCAAGCGAGTACCTTGCGGCCGTGAACGCACTGCACGTGTTATGTGCATGGAATTATGCCGCATTCCTTCGAAGTGTCACCATCCAGTCAAGCATCGCTGCCACAAAAATGAATGTCCACCGTGTAATCAAAAATGTGGTCTACCAATTGGCAGTGGATGTCCGCATATCTGCGAAGCTAAATGTCATGCAGCGGTTAAAGTTtatgagcaaaataaaacaaacggAGCTGCAAATGCTTGGgatcaaaataaaaagttCGAATTCAAAATGCTGCCACATCCACCGTGTGAACAACCAGTGACAGTTACTTGTATTGGTGGTCATGAAATAGCTGAATGGCCTTGTTGGAATTCAAAGCCTACATCATGTCAACGCAAGTGCAATCGTTCTCTACGTTGTGGCAACCACAAATGTGAGCTCGTATGTCACTCCGTGCCGGACTTACAAGATATGAacgaacaaatcggttgcgCTAAATGCCAAGAAGGTTGTAATATCCAACGTCCACCGGGTTGCGAGCACTCTTGCTCACGACCCTGTCATCCACCGCCATGTAATCCGTGtgagaaattgataaaaaccaAATGTTATTGTGGCTTAACGCaacttatatacaaatgttCAGATTATTATAAAGTGGAAGGTTCCAAAGAAGAAATAGCTTTGGCACAAGAACGTTTGAAGAGCTGTGGAAACCGTTGCCTCAAACTTTTTCCGTGCGGTCATCGCTGTCAGACACCTTGTCATTCAGGTAAATGTCCAAATCCCGAATTGTGTCGCAAAAAAGTGCGCATATTTTGCGCATGCaaacgaaataaagttgaagtaTCCTGTGATAAACATCGCGCCGGCCAAACATCCTTACCATGCGATGCCTTCTGCATAGAAACCCAAGCAAAATTGGCAGAACAATTGGAGCGTGAACAGGAGAAACGGCGACAACAAGAGGAAGCCAAAAATCGCGCAGAAGTTgaacaatttgaaaagaaattcaaCAAGCGTAAATATAAAGAACGTAAAGTGGTAATTGAGAAGACGAGTAGacagatcaattggaaattatttggtatttacGGTGGCGTAATACTAGCAATCGTTATAGCCGTTGCTGTAGCATTTTATGCAGATAGTTAA
- Protein Sequence
- MSYSSTNNEKMKENFKANKPKLNGVKRFEEEHAKNIAAAKKRVEKYSSSSDEDEEINETKILDTLFKHYKLNTSSPDTTTALQQKTASFLENALHSGSATCVICIGSVRRSDSIWTCKHCFCFFHLNCIRRWANDSIAQMKAKYEHTSNDQGYYNNLGQFVPPKRKGPLYWSCPQCRKDYTIEERPNTYKCFCGKETNPQQVPFLLPHSCGEICGKSLKPTCGHTCMLLCHPGPCPPCSQYANTSCLCGQSNKISIRCVDKEWKCDRKCNKLLPCGQHKCKALCHKSNQCPPCTNTSLQPCECENETKKRNCSELKWNCKKVCGSKFSCNAHTCKRVCHSGPCGDCPLSLPRSCPCGKTQKIVPCTEIIDSCGDTCQKLLSCGLHTCTQRCHRGECNLCLIITKKKCRCGIHEKELPCWKNFTCETKCKRMRDCGKHTCNKKCCDGQMCQPCDKVCGKPLTCQKHKCQSVCHEGLCYPCNQQSQVNCRCGKTSKRVPCGRERTARVMCMELCRIPSKCHHPVKHRCHKNECPPCNQKCGLPIGSGCPHICEAKCHAAVKVYEQNKTNGAANAWDQNKKFEFKMLPHPPCEQPVTVTCIGGHEIAEWPCWNSKPTSCQRKCNRSLRCGNHKCELVCHSVPDLQDMNEQIGCAKCQEGCNIQRPPGCEHSCSRPCHPPPCNPCEKLIKTKCYCGLTQLIYKCSDYYKVEGSKEEIALAQERLKSCGNRCLKLFPCGHRCQTPCHSGKCPNPELCRKKVRIFCACKRNKVEVSCDKHRAGQTSLPCDAFCIETQAKLAEQLEREQEKRRQQEEAKNRAEVEQFEKKFNKRKYKERKVVIEKTSRQINWKLFGIYGGVILAIVIAVAVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00191050;
- 90% Identity
- -
- 80% Identity
- -