Nasi010283.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- -
- Assembly
- GCA_030068015.2
- Location
- CM061527.1:23376940-23386539[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00035 0.024 15.3 2.0 1 23 991 1013 991 1013 0.98 2 8 0.00035 0.024 15.3 1.3 1 23 1045 1067 1045 1067 0.97 3 8 8.9 6.1e+02 1.5 2.0 1 20 1075 1094 1075 1099 0.85 4 8 0.0082 0.57 11.0 0.0 3 23 1106 1127 1105 1127 0.96 5 8 0.00024 0.016 15.8 1.7 1 23 1133 1155 1133 1155 0.97 6 8 0.021 1.4 9.7 0.2 1 23 1162 1185 1162 1185 0.95 7 8 0.0022 0.15 12.8 2.4 2 20 1192 1210 1191 1213 0.91 8 8 1.9 1.3e+02 3.6 10.7 1 23 1219 1242 1219 1242 0.95
Sequence Information
- Coding Sequence
- ATGATGGTAGGGCAATCGCTAAATCTGCTCGACAGTCTCGATGCAGCATCACAGTGCGATGCTCTGCACTATCTTCTACGTACGCTGAAGTGTAGATACCCCGAAGCTTGTGAACGTGTTACCAGATCACTTTTTCCGCATATCACCGATGAATTTGCCAGCTCGACAAAAACGGCAAACAAGAAACAATTGCAGTTGCAACTGTTGCTCACTGCCAAAAAGGAAGAGATTAAAACGGAGGATGAGGGCGGCTCCACAGATCTGAATCAAAATTTCGAGAAAATCCTATGTAAAGAGGAGATCACGTGTCTCGATGAGGACGATGAGGTTGCggatggtgatggtgatggtgatgtGGACATGAACGTTGATGCCGATGCGCATGCGGAAAATTCGTCTTCCACTAGCAGACGCCTACAATATAATAACAGTAATCGTGCACTTAAAAAAGATCCGCTCGATCTGATACCATCGTCCATCATCAATACCAGACATCAAACGATAAAAGCGAATTGTCGTGGCTCCTTGCAGCCAGCGAGCACGGCTGATAGAGCGTTAGGCGCCAGTGTGAGCCTAATTGGTGAAGACAGCAATAATAGTTGGAATGTATTGGCGAGATGTGACGAGCAAATGCGAAGTTTGTCACGTCACCCCACCAACAAACATCATAAATTCAACAATTATCCAAAATGTTTGCTCAATACTGGCGGGCAGAGTATTCGAGCTACGAGTGCGGAAGATGACTATTGCTTTCAACGCGACAATGAATGGACCATCAGCTATCATCACAGCACGGGCGAATTCAATGTGCGCGCATACAAGCAGCTATTTCGTTTTCGCCTGCATACGGCATTCATTCAAGATCAAATGCCTTTCTTAAGAAAATTCTATAAGAATTTCATACGATCTGGGCAGTTGTTGGGCACTTGTCCGCCTTCACATGTTTTGGCAAAGCTGCGCAAACAACATTTGGATGAATGGCAACAATTGCGTTTGCGCAAATTGGCGGCAGCGGCTGCCGGTGCAGCGCAAAGACATCAACCCTTACCTGCCATCGAATTTGACACCGATCTGGAGTCTGAGTCCGAGTCGCAAATGTCGTCTGCGTTAGCAACGCGCGAGATGTTGAAATTCGAGGAGATCCTCGATGAGGATGAGGGCGTTTGTCAACTGGTTCGTGGCTTGGATGAGGGCTCCGATATCGAAGATGTCTTGGGCGGCAGTAGCGCCAGCGGTAGTGGCCATAGTAATAGCAGCAATGGCGGTGCCACCACAGATCTGCAAACATTGGTTGCTGCGACGCCTGAAGGAGTTTCTGCAATGGCAACAGCGATGCATAATGTGGAAACTGCTGCGTTAGTCGGCGATGAGGGTACGACAGGCGTAAGCTTGAACAGTATCAGCAAACCTCCGCAACAACAAGGAAACAGCAACCTTGTGATAAATGGCCTTACAGCaagcaataatataaataatcttaGCAAAGGCAGCCAGCAATTGGCGAATGTTGTTGGTGATCTTCCGAGTTTGGCTCccaaggagctgcagcagcaaGCGGAAACTCTGCATGGCATTAGTACGCAAAGCGAACAGCAAAGTAGAACTTTGCaagcagaacaacaacaacaacagcagcagcagcagcagcagcagcagcagcagcaacagcaaaactTTTCAAAGCAATATCTTCAAGCCCACAGCGAACAGCAGGTGAATTCGCTACCATTTTCGACACTTAACGACGAGAGGTCACGGGAAAATGAAGCAGAAGCAGCCACAACGGGCAGCTCTATGCTATTACCAGGGCTGAACAATTGCAGTAACAGTGGTGGCAGCAGTGTGGGCGGTTCCAGTGGTGATTCCACATTGACGAACAGAACACCTGAGAATATGAATAACAATGTGCTGAATGCGAGTCAGTCACATTTTCTGGCaattcagcagcagcagcagcaccaccaccaccaccaccttcagcatcaacatcaacatcaacaacaacaagagcaacagaGGCTAATAATGCAAAATCAAAAGCAAGATActccacaacaacagcagcagcagcagcagcagcaacgcaGCCTGCAACAGCAAGCACATCCCTTAACGTTGTTGGGCGGCATGGCTGAGAACGCACAACATcaattgttgcaacaacaacagcagcagcaacagcagttgCAGGAACAAttgcagctgcaacaacaacaacaacgcatgcaacaacaacaacaacaacaaggcacGGCGTTTATAAACAGTATTGACAATATACTCGACACTGGCGGCATGTCCGCCATGatgcaacaaaagcaaaaccaaCAGCACTTCAATGCAGAGCTGCTGGCCGCACACTCGTCACCTACGCTGCAGGAGCAGCGACAACAGCACTCTCCGTTAGCGACGCATgtgcaaatgcaacaacaacaacaacaacaacaacaacaaaaacagcagcagcagcagcagcaacaacaacagcgtcaACAATTGCAACACACGCTGCCGCCAATGTTGCATATGAACCAACAGCATGCAGATGCGCTGCAGCAACACCAGCAACAGTTAaatttgcaacagcaacaacaacaattgcaacaacacaCCAACACACCGTCTTCCGCTTGCACTGCTACACCAACACCAGATACATTGTCGCCAGCACCAACCATCTCGAATATGCTTGCCACATGTGCAACGCCCAGCAACAATACAATGAGCGGTATTTCGACATCTGCCGCCTCAACATCAGGTTCCATTTCATCCGCTTCCTTGAACATATCTTTAGGCCTGGACGATAATGATTTGTCacatgatgacgatgatgatttGGACGAAAATGATTTGGATGATATGGAACCGAAGCAGCAGCTTATTGATGGTGGTAGCAGCAGTAGTACTTCACTTCAAGCACCGCCGGGTGGTATTGGAGGCGTAGGTGGTGGGAAAAAGACGAAACCCACTTATCAGTGCCTGCAATGCCCGAAGTCATATCGAAAACGCAAATCATTGCTGGACCACTACAAAATACATCCTGGCTTTTGTCATGATTGTGGCCAACCAAATGGTACATCATTAGAGGAAATAATTCATCACAATCGGACTATACATGCGAAGGAGTTCCCATTTGTCTGTGACACCTGTGGCGAGTCCTATTCCCGTCGCCAACAATTCCATGCCCATGTTGAATCTCACAGCAAGAAAGAGTTCAAAAcatACTCGTGTATAGAATGTGGACAAAAGTTTCCGCATAAGAAATTGCATCAACAGCACTTGGACAATACGGGCCACAAGGCAGACGGTGCTATTTGTGAGGTTTGCGGTGCTGATTTCCCTTCGAAGAATGCACTCTATCAGCATATAATACGTGTCCATAAAAAAGACAACTTTTTCGAGTGTCACATTTGTCAGAATCGTTTTACATTGAAAGCAAATTTAGAGCGCCACGTGCAGTTGCATACGGAAGTGaaacgtacatatgtttgtgatATTTGTGGCtcatcatattttacatatcCGGCATTGAAAGATCATTACAGCAATGCACACACCGATGCGTCGGAGTGCAAGTGTACTTTGTGTGGTAAACGTTTCGGTACCGTAAAATCACTTCAACGGCACTTGCCATCCCATTCGGAAGAACGGCCACACTGCTGTTGTTACTGTGATCAGACTTTCAAGTGGAAAACGCATTTGGTGCGTCACAAACAAACTGTTCACGGCAATCAACCATCACCGAAGAAGGTGAAACGTTTCGCCAAGGAGGATGAAATGCTCCCGGTCTCAGATATGCCGGGACCTCCACCCgcgaaagttgcaaaaaaatcaaattcgaGTAAACCAAAGCAGCAAGCGCAGCAGCTACAGCAGCAGAATCCTCAACAACAGCAGCTTCAAAGAAGCGTGAGTAACGTGTCTACGCCACCGCCGCTCTCCACCACGCCAGGCACATCACAGCAGGATCCATTCAATGCATCAATGATTAGCAATAGTAGCTCTCAATCGTCAACTGCGTCTGCGTCGGCATCGCAGCATTCGCTATCAACTAATGAATCTCAACAAAATTCTTTGTATACTCAAAGCTTTAACGCCGATAAATCAATGGGAATTCAAGCTCAGCAgcaacaatcacaacaacaacagcagcaagcaCAGCAGCAaccacagcaacaccaacagcagcaacagcaacagcagctgcAACCacaaccgcaacaacaacaaccgcaacaACAGCCGCAACGACCACAACAAATATTGACACCAACATCTATGCAtcatgcacaacaacaacaattacagcaacagctacaacaacaacgaccaaCGCCACCACCagcccaacaacaacagcagcagcagcagcagcagcttcaACGCCGCACACCCAATACACCAGACAGCGTTGGCAGTAGTGGCACTCCAGTTATCGGTGTGGCTGGCAATAGCAATGTAGCTGGCAGCAATATCTTGTCACGCCTGAATAGTTTTGGTCCAGCAAGCGTCGGTGGCATGCCTGGTGGACCCGAATTTCACTTTGATCCTAATCGTGGTGTGTCGGGCGGTCAAAGCAATGCGAGTGCTTACCAGCAGCATCAGTTGATCAATCAATACCAGCAGCAACAtcatcaacagcagcaacagcaagctGCGTCGTCTGCAGCTGcagtacaacagcaacaacaacaacaacatatgcgCAGCCATACACCACAAAGCCCGCATCAACCGCACCCACAGCAaccacaacagcagcagcagcagcagcaacagcaacaacagcaacaacaacatttgcgCAGCCATACACCACAAAGTCCGCACCAACCGCatccacaacaacagcaacagcaacattttACGTCACCGCACCATATGCCTGCTACACAACAGCAGTTGCATCATCAACAAATGCTCCATCATCAGCACcaaatgcaacagcaacaacaacaacaacaacatcgccaCAGCCAGCAGCGATCGCCACTGCATCACGCAACACCCACTCAACAgctgcagcaacaacatcaccaaCCATCACACTCACCGCAACGCGGTCGCTTGCAATCCCCACAGCCGCAACAGTCACCATTGcagcaccaacagcagcagcaattgcaacaacagcaacaacaacaacagtatgcACTGCAACAGCAAGCAAATGAGCCGCCTTGGGCTACTCTCGGTTTCGGTGCAACAAATTCAATTGGTGGTGTCAACACGCACCAACCACAAGCGCcgccgcaacaacaacagccactaCCACaaccacagcagcagcagcaacaaggtGTTGTTGGCACTCCTGGTGGCGGTGGTGAGAAAGACAATGCCGCCAAATACTATATTGTTGACACACCCGATTTTCTGGGGCTTCCAATGAATGTCGGCTCTAATGGCGGTCCATCAGGTTCTACAACTCCGAATTCACTaactcaacagcaacaacaacagcagcaacaacagcagcagcagcaagctaCGGTTGGACCGAGTGGTGGCATCAGCAGCAAACAACAGGAATCGACAATTGGCAGCGAACTAATCAGCTTTCAGAGTATGTGGCCATCAGGTGGATCCGCCGCCTCGCAAATGATGTTCGGCAGTGGTGcaccgcagcagcagcaacaacaacagcagcagcagcagcagcagcaacagaacgtacaacaacaacaaacgcagAGTAATGCACAAAGTGGTCAGGGCAGCGCAGTTGGTGTTGGTGGCGTTGGTGTGAATGTTGGGGGAGCAGAACcgcacaactacaacaacattgGCAGCATACTGACAAATCTCATTGATACGAATCCAGCGTCCATGGAATATAACTTTGATTTAATGCAGCCAGGTGCCACACAAATGGGCGTATCTCAATCGCAATCTCAaccacagcagcagcaacaacaacagcaacaacatcaacaaaattCTCTTTCAGCCcttcaacagcaacagcagcaagcaCAACCACAACATCCGCACTCCGTTCTACAGCATCAGTCGCATCCTCATCAACATCACAGCGCCGCGGCTGCTGCTGCGGCAGCAGGTTATGGTGCGGCCGGTTTAATGCGACACCCCGGCTTGTATGGCTCTCCGAGTGGCGCCTCTTTATACGATACCAATGCTGCTGCTGTGGCAGCTGCacatcaccatcaccatctgCCTTCCCATCATACCACTCTAGCGGATATAgctgagcaacaacaaaagaacaGCTTCCAACCCTATCATCCACATGCGGCAGCACATACGCTAAGCGGACACCATCCACTCGCGCCAACCGCACATCATCCACTCGCTCCACACCTCTTGCCGCCACCACCACATGCAAGCATATACGATCGTGGCGTTGGTGGTGGTTACCCCGCCATGTTATTGGGCAGtagcggcggcggtggtggcggtGATGAACAGAAAACAGTGCTACCACCAATCAGTGATTATATGCatcacatacaacaacaacagttgcaaTCACAACACCCGCAACAATCTGACCTAGTCTACTATCCAGTGAAGAATGATTGA
- Protein Sequence
- MMVGQSLNLLDSLDAASQCDALHYLLRTLKCRYPEACERVTRSLFPHITDEFASSTKTANKKQLQLQLLLTAKKEEIKTEDEGGSTDLNQNFEKILCKEEITCLDEDDEVADGDGDGDVDMNVDADAHAENSSSTSRRLQYNNSNRALKKDPLDLIPSSIINTRHQTIKANCRGSLQPASTADRALGASVSLIGEDSNNSWNVLARCDEQMRSLSRHPTNKHHKFNNYPKCLLNTGGQSIRATSAEDDYCFQRDNEWTISYHHSTGEFNVRAYKQLFRFRLHTAFIQDQMPFLRKFYKNFIRSGQLLGTCPPSHVLAKLRKQHLDEWQQLRLRKLAAAAAGAAQRHQPLPAIEFDTDLESESESQMSSALATREMLKFEEILDEDEGVCQLVRGLDEGSDIEDVLGGSSASGSGHSNSSNGGATTDLQTLVAATPEGVSAMATAMHNVETAALVGDEGTTGVSLNSISKPPQQQGNSNLVINGLTASNNINNLSKGSQQLANVVGDLPSLAPKELQQQAETLHGISTQSEQQSRTLQAEQQQQQQQQQQQQQQQQQQNFSKQYLQAHSEQQVNSLPFSTLNDERSRENEAEAATTGSSMLLPGLNNCSNSGGSSVGGSSGDSTLTNRTPENMNNNVLNASQSHFLAIQQQQQHHHHHHLQHQHQHQQQQEQQRLIMQNQKQDTPQQQQQQQQQQRSLQQQAHPLTLLGGMAENAQHQLLQQQQQQQQQLQEQLQLQQQQQRMQQQQQQQGTAFINSIDNILDTGGMSAMMQQKQNQQHFNAELLAAHSSPTLQEQRQQHSPLATHVQMQQQQQQQQQQKQQQQQQQQQQRQQLQHTLPPMLHMNQQHADALQQHQQQLNLQQQQQQLQQHTNTPSSACTATPTPDTLSPAPTISNMLATCATPSNNTMSGISTSAASTSGSISSASLNISLGLDDNDLSHDDDDDLDENDLDDMEPKQQLIDGGSSSSTSLQAPPGGIGGVGGGKKTKPTYQCLQCPKSYRKRKSLLDHYKIHPGFCHDCGQPNGTSLEEIIHHNRTIHAKEFPFVCDTCGESYSRRQQFHAHVESHSKKEFKTYSCIECGQKFPHKKLHQQHLDNTGHKADGAICEVCGADFPSKNALYQHIIRVHKKDNFFECHICQNRFTLKANLERHVQLHTEVKRTYVCDICGSSYFTYPALKDHYSNAHTDASECKCTLCGKRFGTVKSLQRHLPSHSEERPHCCCYCDQTFKWKTHLVRHKQTVHGNQPSPKKVKRFAKEDEMLPVSDMPGPPPAKVAKKSNSSKPKQQAQQLQQQNPQQQQLQRSVSNVSTPPPLSTTPGTSQQDPFNASMISNSSSQSSTASASASQHSLSTNESQQNSLYTQSFNADKSMGIQAQQQQSQQQQQQAQQQPQQHQQQQQQQQLQPQPQQQQPQQQPQRPQQILTPTSMHHAQQQQLQQQLQQQRPTPPPAQQQQQQQQQQLQRRTPNTPDSVGSSGTPVIGVAGNSNVAGSNILSRLNSFGPASVGGMPGGPEFHFDPNRGVSGGQSNASAYQQHQLINQYQQQHHQQQQQQAASSAAAVQQQQQQQHMRSHTPQSPHQPHPQQPQQQQQQQQQQQQQQQHLRSHTPQSPHQPHPQQQQQQHFTSPHHMPATQQQLHHQQMLHHQHQMQQQQQQQQHRHSQQRSPLHHATPTQQLQQQHHQPSHSPQRGRLQSPQPQQSPLQHQQQQQLQQQQQQQQYALQQQANEPPWATLGFGATNSIGGVNTHQPQAPPQQQQPLPQPQQQQQQGVVGTPGGGGEKDNAAKYYIVDTPDFLGLPMNVGSNGGPSGSTTPNSLTQQQQQQQQQQQQQQATVGPSGGISSKQQESTIGSELISFQSMWPSGGSAASQMMFGSGAPQQQQQQQQQQQQQQQNVQQQQTQSNAQSGQGSAVGVGGVGVNVGGAEPHNYNNIGSILTNLIDTNPASMEYNFDLMQPGATQMGVSQSQSQPQQQQQQQQQHQQNSLSALQQQQQQAQPQHPHSVLQHQSHPHQHHSAAAAAAAAGYGAAGLMRHPGLYGSPSGASLYDTNAAAVAAAHHHHHLPSHHTTLADIAEQQQKNSFQPYHPHAAAHTLSGHHPLAPTAHHPLAPHLLPPPPHASIYDRGVGGGYPAMLLGSSGGGGGGDEQKTVLPPISDYMHHIQQQQLQSQHPQQSDLVYYPVKND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304139;
- 90% Identity
- -
- 80% Identity
- -