Basic Information

Insect: Ceratitis capitata
Gene Symbol: -
Assembly: GCA_000347755.4
Location: NW:3070143-3094097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00027 0.014 15.3 2.0 1 23 981 1003 981 1003 0.98

2 8 0.00027 0.014 15.3 1.3 1 23 1035 1057 1035 1057 0.97

3 8 0.21 10 6.3 2.6 1 22 1069 1090 1069 1093 0.88

4 8 0.0063 0.32 11.0 0.0 3 23 1100 1121 1099 1121 0.96

5 8 0.00018 0.0092 15.9 1.7 1 23 1127 1149 1127 1149 0.97

6 8 0.016 0.79 9.8 0.2 1 23 1156 1179 1156 1179 0.95

7 8 0.0023 0.12 12.4 2.4 2 20 1186 1204 1185 1207 0.91

8 8 1.4 72 3.6 10.7 1 23 1213 1236 1213 1236 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00027	0.014	15.3	2.0	1	23	981	1003	981	1003	0.98
2	8	0.00027	0.014	15.3	1.3	1	23	1035	1057	1035	1057	0.97
3	8	0.21	10	6.3	2.6	1	22	1069	1090	1069	1093	0.88
4	8	0.0063	0.32	11.0	0.0	3	23	1100	1121	1099	1121	0.96
5	8	0.00018	0.0092	15.9	1.7	1	23	1127	1149	1127	1149	0.97
6	8	0.016	0.79	9.8	0.2	1	23	1156	1179	1156	1179	0.95
7	8	0.0023	0.12	12.4	2.4	2	20	1186	1204	1185	1207	0.91
8	8	1.4	72	3.6	10.7	1	23	1213	1236	1213	1236	0.95

Sequence Information

Coding Sequence: ATggataataaaacaatacaattgGATTTCAAATTACTGGTAGGGCAGTCGCTAAATCTGCTCGACAGTCTCGATGCAGCATCACAGTGCGATGCTCTGCACTATCTTCTACGTACGTTGAAATGTAGATATCCCGAAGCTTGTGAACGTGTAACGAGATCCCTTTTCCCGCATATCACCGATGAATTTGCCAGCTCGACTAAAACGGCAAACAAGAAACAGTTGCAGCTGTTGCTCACTGCCAAAAAGGAAGAGATTAAAACGGAGGATGAGGGCTCCACAGATCTGAATCAAAATTTCGAGAAGATTCTGTGTAAGGAGGAGATAACGTGTCTCGACGAGGACGATGAGGATGTGGATGGAGATGgagatggtgatggtgatggtgatggggATGGTGATGTGCACATGGACGTCGATGCCGATGCAGATGCGGAAAATTCGTCTTCCACTAGTAGACGACTAAAATGTAATAACAGTAATCGTGCACTTAAACAAGATCCGCTCGATCTGATACCATCGTCCATCATCAACACCAGAAACCCGATAAAAACAAACTGCCGTGGCTCCTTGCAGCAAGCAAACGCGCGCGATAGAGCGATAGGCACCAGTGTAAGTCTAATTGGTGAAGACAGCAATAACAGTTGGAATGTCTTGTCGAGTTGTGACGAGCAAGTGCGAAGTTTGTCACGtcaccacaacaaaaacaataaactcaACCATTATTCGAAATTGCTTAGCGATAATTGTTTGTCCAGTACTGGCGTGCAGAGTATTCGAGCCACAAATGTTAAGGATGAATACTGCTTCAACGGTGAAAATGAATGGACCATCCGTTACCATCACAGTACGGGCGAATTCAATGTGCGGGCTTACAAACAGCTATTTCGTTTTCGTCTACATGCGGCATTAACTGAAGAGCATATgccttttttaagaaaattctaTAAGAAATTCATTCGATCTGGCCAGCTATTGGGCACATGTCCGCCTTCACATGTTTTAGAAAAGTTGCGCAAACAACGTTTGGATGAATGGCAACAGTTGCGCTTGCGCAAATTGGCAGTGGCTGCTGCTGCATCGCAAAGGCGTCAACTTTTACCTGCCATCTCATTTGACTCTGACCTGGAGTCGGAGTCTGAGTCGCAAATGTCGTCTACGGTAGCAACGCAAGAGATGTTGAAATTCGAGGAGATCCTTGATGAGGATGTGGGCGTTTGTCATCTGGTTCGTGGCATGGAAGAGGGCTCTGATATCGAAGATGCGTTGGGCGGCAGTAGCGCCAGCGGTAGTGGCCATAGTAATAGCAGCAATGGCGGCGCCAATACAGACCTGCAAGCTTTGGTCGCCGCGACGCCTGAAAGTGTTTCTGCCATGGCAGCGATAGCGGCACCGACGCTTAATGCGGAAGCCGATGTGTTAGTCGAAGGTGAAGGTACGGCAAGTGAATGCTTGAACAGTATCAGTAAACCTCTGCAACAACAAGGAAACAGCAACCTTGTGATAAATGGCCTTACAGCaagcaataatataaataatcttAGCAAAGGCAGTCAGCAATTGGCGAATATTGTTGGTGATCTTCCGAGTTTGGCTCCCAAGGAGCTGCAGCCGCAAGCGGAAACGCTGCACGACATTAACGCACAGAGCGAACAGCAAAGTAGTACTTTGCCAtcacaacaacatcagcaacaacaaaacttttcgAAGCAATATCTACAAGCCCGCAGCGAACAGCAGGTGAATTCGCCACCATTTGCTGCACTTAACGACGATGAGTCCCGGAAAAATGAGCCAGAGACAGCCACGGTGGGCGTTGGCATCAGCGGCAGCCTGAACGCCAAAGTTGGAGCTATGCTTTTACCAGGACTGAATAATTGCAGTAACAGTGGTGGCAGCAGTGTGGGTGGTTCCAGTGGGGATTCCGCGTTGTTGAATAGAACGCCTGAGAACTTCAATAACAGTGTGCTGAATGCGAATCAGCCACATTTTCTGGCAATTCAGCAACAGCAGcactaccaccaccaacaacaacaacaacaggagcaACAGAGGCTAATAATGCAAAATCAAAAGCTAGACAACACTTCACAGCCGCAGCGGGGCCTGCAACAACAAGCACATCCCCTAACGTTGTTGGGAGGCATGGCTGAGAACGCACAACAtcaattgcagcaacaacagcagcagcaacagttgcAGGAACAAttgcagctgcaacaacaacgcatGCAGCAACAAAGGCCAGCGTTTATAAACAGTATTGACAATATACTCGAGAGTGGTGGCATGTCCGCCATgatgcaacaaaagcaaaaccagCAGCACTTTAATTCGGAGCTGCTGTCGCACTCGTCACCCACACTGCAGGAGCAGCGACAACAGCAGTCTCCGGTAGCGGCGCATgcgcaaatgcaacaacaacaccaacaacagcagcagcttcaGCATCAACAGCGCCAACAATTGCAGCACGCGCTGCCAATGTTACATATGAACCAACAACATGCAGATGCGCTGCAGCAACACCAGCAACAGCTAaatttgcaacaacagcaacaacaactgcaacaacacgCCGACACGTCTTCCGCTTGCACGGCACCAACACCAGCTACAGCATCTTCGGCACCAACCATGGCGAATATGCTCTCCATATGTGCAACGCCGAGCAGCAACGCAATGAGCGGCATTTCGACATCCGCCTCAACCTCAGGTTCAATTTCCTCCGCTTCCTTGAACATATCTTTAGGCCTGGACGATAATGATTTATCACACGATGAAGACGATGATTTGGACGAACATGATTTGGATGATATGGAATCAAAGCAGCAGCTAATTGATGGTGGTAGTAGCAGCAGTACTTCGCTTCAAGCACCGCCGGGTGGTGTTGGAGGAGGCGGCGGTGCAGGTACTGGTGTAAAGAAGGCGAAACCCAGTTATCAATGCCTGCAGTGCCCGAAGTCATATCGAAAACGCAAATCATTGCTGGACCATTATAAAATACATCCGGGCTTTTGTCATGATTGTGGCCAACCGAATGGTACATCATTAGAGGAAATAATTCACCATAATCGGACAGTGCATGCGAAGGAATTCCCATTTGTCTGTGACACCTGTGGCGAGTCCTATTCGCGTCGCCAACAATTCCACGCCCATGTTGAATCTCACAGCAAGAAAGAATTCAaaagtgagtgtgagtCATATTCGTGTGTAGAATGTGGACAAAAGTTTCCGCACAAGAAATTGCATCAACAGCACTTGGACACCACAGGCCACAAGGCAGACGGTGCTATTTGTGAGGTTTGCGGTGCTGACTTCCCCTCGAAGAATGCGCTGTACCAGCATATAATACGCGTCCATAAGAAAGACAACTTTTTCGAGTGCCACATTTGTCAGAATCGTTTTACTTTAAAAGCGAATTTAGAACGTCACGTGCAGTTGCATACGGAAGTgaaacgtacatatgtttgtgatATTTGTGGCTCATCATATTTTACATATCCGGCACTGAAAGATCACTACAGCAATGCACATACCGACGCGTCCGAGTGTAAGTGTACTTTGTGTGGTAAACGTTTCGGCTCTGTAAAATCACTTCAACGGCACTTGCCATCACATTCGGAGGAACGGCCACACTGCTGCTGTTACTGTGATcagACCTTCAAGTGGAAAACGCATTTGGTGCGTCACAAACAAACCGTTCACGGTAATCAGCCATCGCCGAAGAAAGTGAAACGTTTCGCCAAGGATGATGAAATGCTCCCGACCGCAGATATGCCAGGACCTCCACCCGCGAAAGttgcgaaaaaatcaaattcgagTAAACCAAAGCAGCAGacgcagcaacagcagcagcagaacccacaacagcagcagcttcaAAGAAGCGTGAGTAACGTTTCTACGCCACCGCCGCTTTCCACGACGCCAGGCTCATCACAGCAGGATCCATTCAATGCATCGATGATCAGCAACAGTAGCTCTCAATCTTCAACAGCTTCTGCATCGGCGTCGCAGCATTCGCTATCAACTAATGAATCTCAGCAGAATTCCATGTATACTCAAAGCTTTAACGCCGATAAATTGATGGGAATTCAagctcagcagcagcaaccacaacaacaacagcagccaccgcaacagcagcaacaaccacaacaacagccgCCGCCGCAACCGCAGCCGCAACGACCACAACAAATACTGACACCAACATCCGTGCATCacgcacaacaacagcaattgcagcaacagttacaacaacaacggccgACGCCACCACCagcccaacaacaacagcaacagctgcaaCGCCGCACACCTAATACACCAGACAGCGTTGGCAATAGTGGCAATCCTGTTATCGGCGTAGGTGGCAATACCAATGTAGCAGGCAATAATATCATGTCACGACTGAATAATTTTGGTCCAACGAGCGCAGCTGGAGTCGGTAGCATGCCTGGTGGACCAGAATTCCATTTTGACCCTAATCATGGTGTGTCTGGCGGCCAAAGCAACGCGAGTGCTTACCAGCAGCATCAGTTGATCAATCAATACCAGCAGCAGCACCATCAACAGCAGCAGGCTGCGTCCTCTGCAGCTGCGgttcaacaacagcagcagcaacagcaacagcagcatttGCGCAGCCATACACCGCAAAGCCCGCACCAACCACATccccagcaacaacaacagccgcaaCATTTCACGTCGCCGCACCATATGCCAGCAAGCCAACAGCAGTTGCACCATCAACAAATGCTCCATCATCAGCACcaaatgcaacagcaacagcaacagcagcagcagcaacagcaacatcgtCACAATCAGCAGCGTTCGCCACTCCATCACGCAACACCCActcaacaattgcaacaacaacatcaccaacCATCACATTCACCGCAACGCGGACGTTTGCAGTCGCCACAGCCGCAGCAGTCACCGCTgcagcaccaacagcagcaacaccagcaattgcaacaacaacagtatgcACTGCAACAGCAATCGAATGAGCCACCTTGGGCAAATCTCGGTTTCGGTGCCAATTCAATTGGTGGTGTTAACGCGCACCAACCACaagcacagcaacaacagcagtcacaacaacaacagcaacagcagtcacaacaacaacagcaacagcagcaacaaggTGTTGTTGGCACACCCAGCGGTGGTGAACTGAAAGACAACGCCAAATACTATATTGTTGACACACCCGATTTTCTGGGGCTTCCAATGAATGTCGGCTCTAACGGCGGTCCATCGGGTAACACAACGCCGAATTCACTAactcagcaacagcaacagcagcagcagcagcaacaacaacaacagcaagcggCAGTTGGACCGAGTGGTGGCGTCAGCAACAAACAACCGGAATCGACAATTGGCGGTGAACTAATCAGCTTTCAGAATATGTGGCCATCTGGTGGATCTGCCGCCACACAAATGATGTTCGGCAGTGGGGCaccgcagcagcaacaacaacagcagcagcagcatcagcacgtgcaacaacagcaaacgcaGAATAATGCACAAGCGGGACAGAGCAGCGCCGTaggtgttggtggtgttggtgtgAATGTTGGGGGAGCAGATCcgcacaactacaacaatattgGCAGCATACTGACGAATCTCATTGATACGAACCCAGCTTCAATGGAATATAACTTTGATTTAATGCAACCAGGTGCCACACAAATGGGCGTATCTCAATCGCAATCTcaaccacagcagcagcaaccacaaccacaacaacatcaacaaaattCTCTTTCAGCtcttcagcagcaacagcaacaagccCAACCACAGCATCCGCACTCCGTTCTACACCATCAGTCGCATCCACATCAGCATCACAGCGCCGCAGCCGCTGCAGCGGCTGGAGGTTATAGTACGGCTGGTCTAATGCGACACCCCGGCTTATATGGCTCTCCAAGTGGCGCCTCTTTATACGAAACTaatgcagctgctgctgctgcagctgctcaTCATCACCACCATCTGCCTTCCCATCATCCCAGTTTAGCGGATATAACTGAGCAACAGCAAAAGAACAGTTTCCAACCCTATCATCCACATGCGGCATCACATACACTAAGCGGACACCATCCACTCGCGCCAACCGCGCATCATCCCCTCGCTCCACACCTCCTGCCGCCACCACCACATGCAAGCATCTATGATCGTGGCGTTGGTGGTGGGTATCCTACGATGTTATTGGGCAGTAGTGGCGGCAGTGGCGGTGACGAACAGAAAACTGTTCTACCACCAATCAGTGATTATATGCatcacatacaacaacaacaattacaatcaCAACACCCGCAACAATCTGACCTAGTCTACTACCCAGTAAAGAATGATTGA
Protein Sequence: MDNKTIQLDFKLLVGQSLNLLDSLDAASQCDALHYLLRTLKCRYPEACERVTRSLFPHITDEFASSTKTANKKQLQLLLTAKKEEIKTEDEGSTDLNQNFEKILCKEEITCLDEDDEDVDGDGDGDGDGDGDGDVHMDVDADADAENSSSTSRRLKCNNSNRALKQDPLDLIPSSIINTRNPIKTNCRGSLQQANARDRAIGTSVSLIGEDSNNSWNVLSSCDEQVRSLSRHHNKNNKLNHYSKLLSDNCLSSTGVQSIRATNVKDEYCFNGENEWTIRYHHSTGEFNVRAYKQLFRFRLHAALTEEHMPFLRKFYKKFIRSGQLLGTCPPSHVLEKLRKQRLDEWQQLRLRKLAVAAAASQRRQLLPAISFDSDLESESESQMSSTVATQEMLKFEEILDEDVGVCHLVRGMEEGSDIEDALGGSSASGSGHSNSSNGGANTDLQALVAATPESVSAMAAIAAPTLNAEADVLVEGEGTASECLNSISKPLQQQGNSNLVINGLTASNNINNLSKGSQQLANIVGDLPSLAPKELQPQAETLHDINAQSEQQSSTLPSQQHQQQQNFSKQYLQARSEQQVNSPPFAALNDDESRKNEPETATVGVGISGSLNAKVGAMLLPGLNNCSNSGGSSVGGSSGDSALLNRTPENFNNSVLNANQPHFLAIQQQQHYHHQQQQQQEQQRLIMQNQKLDNTSQPQRGLQQQAHPLTLLGGMAENAQHQLQQQQQQQQLQEQLQLQQQRMQQQRPAFINSIDNILESGGMSAMMQQKQNQQHFNSELLSHSSPTLQEQRQQQSPVAAHAQMQQQHQQQQQLQHQQRQQLQHALPMLHMNQQHADALQQHQQQLNLQQQQQQLQQHADTSSACTAPTPATASSAPTMANMLSICATPSSNAMSGISTSASTSGSISSASLNISLGLDDNDLSHDEDDDLDEHDLDDMESKQQLIDGGSSSSTSLQAPPGGVGGGGGAGTGVKKAKPSYQCLQCPKSYRKRKSLLDHYKIHPGFCHDCGQPNGTSLEEIIHHNRTVHAKEFPFVCDTCGESYSRRQQFHAHVESHSKKEFKSECESYSCVECGQKFPHKKLHQQHLDTTGHKADGAICEVCGADFPSKNALYQHIIRVHKKDNFFECHICQNRFTLKANLERHVQLHTEVKRTYVCDICGSSYFTYPALKDHYSNAHTDASECKCTLCGKRFGSVKSLQRHLPSHSEERPHCCCYCDQTFKWKTHLVRHKQTVHGNQPSPKKVKRFAKDDEMLPTADMPGPPPAKVAKKSNSSKPKQQTQQQQQQNPQQQQLQRSVSNVSTPPPLSTTPGSSQQDPFNASMISNSSSQSSTASASASQHSLSTNESQQNSMYTQSFNADKLMGIQAQQQQPQQQQQPPQQQQQPQQQPPPQPQPQRPQQILTPTSVHHAQQQQLQQQLQQQRPTPPPAQQQQQQLQRRTPNTPDSVGNSGNPVIGVGGNTNVAGNNIMSRLNNFGPTSAAGVGSMPGGPEFHFDPNHGVSGGQSNASAYQQHQLINQYQQQHHQQQQAASSAAAVQQQQQQQQQQHLRSHTPQSPHQPHPQQQQQPQHFTSPHHMPASQQQLHHQQMLHHQHQMQQQQQQQQQQQQHRHNQQRSPLHHATPTQQLQQQHHQPSHSPQRGRLQSPQPQQSPLQHQQQQHQQLQQQQYALQQQSNEPPWANLGFGANSIGGVNAHQPQAQQQQQSQQQQQQQSQQQQQQQQQGVVGTPSGGELKDNAKYYIVDTPDFLGLPMNVGSNGGPSGNTTPNSLTQQQQQQQQQQQQQQQAAVGPSGGVSNKQPESTIGGELISFQNMWPSGGSAATQMMFGSGAPQQQQQQQQQHQHVQQQQTQNNAQAGQSSAVGVGGVGVNVGGADPHNYNNIGSILTNLIDTNPASMEYNFDLMQPGATQMGVSQSQSQPQQQQPQPQQHQQNSLSALQQQQQQAQPQHPHSVLHHQSHPHQHHSAAAAAAAGGYSTAGLMRHPGLYGSPSGASLYETNAAAAAAAAHHHHHLPSHHPSLADITEQQQKNSFQPYHPHAASHTLSGHHPLAPTAHHPLAPHLLPPPPHASIYDRGVGGGYPTMLLGSSGGSGGDEQKTVLPPISDYMHHIQQQQLQSQHPQQSDLVYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045857;
90% Identity: -
80% Identity: -