Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: -
Assembly: GCA_030068015.2
Location: CM061529.1:43649360-43653974[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.022 1.5 9.7 0.0 1 23 123 146 123 146 0.95

2 18 1.7 1.2e+02 3.7 9.0 2 23 195 217 191 217 0.92

3 18 0.035 2.4 9.0 0.3 1 23 329 352 329 352 0.95

4 18 0.28 19 6.2 2.5 2 23 402 424 401 425 0.93

5 18 0.023 1.6 9.6 0.1 1 23 479 502 479 502 0.90

6 18 4 2.7e+02 2.6 0.0 2 14 521 533 520 537 0.83

7 18 0.00047 0.033 14.9 1.7 2 23 553 575 552 576 0.96

8 18 5.1e-05 0.0035 17.9 0.5 1 23 654 677 654 677 0.96

9 18 0.48 33 5.4 5.7 1 23 686 708 686 709 0.95

10 18 0.0032 0.22 12.3 0.1 1 23 754 777 754 777 0.95

11 18 0.13 8.9 7.2 4.0 2 23 827 849 826 849 0.96

12 18 0.017 1.2 10.0 0.2 1 23 908 931 908 931 0.97

13 18 0.0079 0.54 11.1 1.0 1 21 983 1003 983 1004 0.95

14 18 0.0019 0.13 13.0 0.0 2 23 1071 1093 1070 1093 0.95

15 18 0.65 44 5.0 2.1 2 23 1143 1165 1142 1165 0.94

16 18 2.2 1.5e+02 3.4 0.4 2 23 1243 1265 1242 1265 0.94

17 18 9 6.2e+02 1.4 1.0 1 16 1283 1298 1283 1307 0.79

18 18 8.8 6.1e+02 1.5 4.9 2 23 1315 1337 1314 1337 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.022	1.5	9.7	0.0	1	23	123	146	123	146	0.95
2	18	1.7	1.2e+02	3.7	9.0	2	23	195	217	191	217	0.92
3	18	0.035	2.4	9.0	0.3	1	23	329	352	329	352	0.95
4	18	0.28	19	6.2	2.5	2	23	402	424	401	425	0.93
5	18	0.023	1.6	9.6	0.1	1	23	479	502	479	502	0.90
6	18	4	2.7e+02	2.6	0.0	2	14	521	533	520	537	0.83
7	18	0.00047	0.033	14.9	1.7	2	23	553	575	552	576	0.96
8	18	5.1e-05	0.0035	17.9	0.5	1	23	654	677	654	677	0.96
9	18	0.48	33	5.4	5.7	1	23	686	708	686	709	0.95
10	18	0.0032	0.22	12.3	0.1	1	23	754	777	754	777	0.95
11	18	0.13	8.9	7.2	4.0	2	23	827	849	826	849	0.96
12	18	0.017	1.2	10.0	0.2	1	23	908	931	908	931	0.97
13	18	0.0079	0.54	11.1	1.0	1	21	983	1003	983	1004	0.95
14	18	0.0019	0.13	13.0	0.0	2	23	1071	1093	1070	1093	0.95
15	18	0.65	44	5.0	2.1	2	23	1143	1165	1142	1165	0.94
16	18	2.2	1.5e+02	3.4	0.4	2	23	1243	1265	1242	1265	0.94
17	18	9	6.2e+02	1.4	1.0	1	16	1283	1298	1283	1307	0.79
18	18	8.8	6.1e+02	1.5	4.9	2	23	1315	1337	1314	1337	0.95

Sequence Information

Coding Sequence: atggaaCAACTATTCATGTTCTCAAATGAGTATACAGTGGATGACGATAATAATGCTAAGAAAGATTGCAACAAAGAGGAAGGAAGAATAAAAAACTGCAACAAAGAAGAagcgaaaattaaaaacgaGCCTGAAGACAATGTCGTTGATGAAGGAGAAGATGATAGCTATATAATGCCAGAATCATTGCTGCAGCAAATAACTACAACACAAGGAAGAGAtgctgaagatgaagatgataatacaatatttaattttggaatTGAAACAATTGCAAATAAGCGTCCTACTCCTACCATTGCGTTAAAGCCATCTTCTGCAAAAAACCCACAAGATGCATTTATTAATTTCGATTTAGCTGTAATGTATATATGCCCAGCTTGTGGTAGTGAATTTGATACTCAAACCGCATGGAAGTCACACATTAATGGTATCCATGAATACAATACACGCCACGGATTAAATTTTGTACCAATTGATAAATTATATCACAGATGCCTGGAGTGCAATAAGCCGATTGCTATGCATGctatggaaaatttattaaaacataaatttacacatttacCACATCGTTGTACAAAATGTAGGATTTGCCACAGGCTTTATAAATATCGGCAGGATCTAATTGTACATTTACGTCTATGCCATCGAGAGGATGTCATAGAAATGATGAGTGATAAGCTTGATAAAAACAGATACGAAACATCACGCACTTATGTGCCCCCAAGAAAAAATACACAATTAGAAATTAGGGATATTAAAGGTAACGCAAttgatatatttgaaaacaCTAATGACAGCGTTGAAGTAAAAAACGAACCATTTGATATTGAGGACCAAGAAGACGAAGATATGCAAGgccaaattaaaccaaaatttcaTCAAACTTCTATTTTAGAAGACGCATTGAATCGAAAATCCTCACAAATGTCTGGACAAAGTTATCAAGCCAATgagagaaaatgtgaaaaacataTAGAGTATATTTGCCCGGTTTGTAGctctgaatttaaatttaaaaatgaatggcGGGACCATCTCCAagaaatgcataattttttttcgttcgatgGTTTGGGATTAGAAAAACGTAGTAACTCAACAGTTGAATGTTTAGAATGCAAAATGgttTTACCTAGCTACTCAATAGAGCCgctacaaatacataaattttcacaTCTCCCTTGCAAAACATATGTACGTTGCAAACTTTGCTCACGTTCGTTTCAAAACTATAAAggcattttaaaacatttactaAATCAACATCATATTGAAAATGAGGTGGACGGCGATTTAGACGAGAGCCAAGACGGCCGTTCTTTTGATCCATTTTCCGTATCATCTACTGTGGATTTTGATGACGATCAAGTGCCAGCTCATGAGCAAGGGAAATTCGATTGCCGTGATATTTATGAAACACAAATAGATTATTTATGTCCAAAGTGTGgtgaagaattttttgaaagaaaattgtgGAGAAATCACATCGTTCAAGCCCATAActatattgatttgaaaacaCTTTGTTTTGAAGCTTTAAATGAGCATCAATTACAATGTCGCTTATGTGGTAAAGTGATTACAAACGCTTACGGTGTGCAAAACGCTCAGCAACACTATTTCACACATTTGCCACACAAGGCATACATACGTTGTCGTATATGTGCAAAATCTTACACAGATCGTAAGGGTTTAGTTAAACATTTGCGCAAAGTACatcatatttcttctaaaacaAAGACCAAATTATCTAAACCAACGACATCATTCCAAAAAAACACTCCATTGAAAGCTCCGCGTAAAGAACCAGTTAAAGAAATTGTACGACATAATGgtgttatatatgaaataaaatttttagatgaAGATAGTAATAATGATGCATTTATGGACGATATGTCAACATCGATAGAAGCTAGAAATGATTACAGTTTTGCAAAGCCTGCAAAAAGACATGTGTGCCCCGATTGTTATTCAACTTTTAGCACTGCACCAGAATTACAAAAACACATTCGTGAACAACATGATTTTAAAAAGCCCACACAGTCTCATGTCTGCACTAGGTGCTATTGTACATTTGAATCTGAGGGCGCTTTGCAAGACCATAAATTAAAGCATCACTTAAACAAATCagataatttagaaaataatgaagCTAATGACGACGATGACTTACTGCTGGTGCCAAGTAGGAATGAGGAAGTAAAGGTTAGTTCCAGCACGGGTTCAACCAACATTGatcaatatttttgctatatgTGTCCTGCATGCGGTGACGAATTTAAATCACAATATGAATGGCGTCGTCACATTAACGAtattcattacttcgaccgccGTTATGAGTTGAATTTCAAACAATTAGATAAATTTCACTTCCAGTGTTTAGAATGTAAAGAAATAGTTAATAGCGGTAAATTAAAAGCTCTGCAAGACCATAAATTTCGTCACTTGCCGTATAAATTATACATTAAGTGCCGCCTATGCAGTACTTGCTACAATCATAAACCAAATGTGGTTACACATCTACGTATACGTCACAATTTGATCGATCCACGTGAAATGCTTAATTCCAGCCCATCAATATCACCGAATCCATCACAAATGCACAAAATCTATGAAAAACAATCCACatcatcttcaaaaatatttaaaccttTGACGGCCGAAGACATTATTTCCAATCACAATGCAGTGGATCACGAATCTATTACTTATCGTTGTCCTCAATGCAATGACCCATTTGAAACGCACGCTCTATGGCGGCAGCATATTGTTACCGCACATGACCTCAACAGCCGACAGGGGTTGAATTTCCGTCAGTTAGATGTACACCACTATATTTGCTTAGAGTGTTATAAGCGCGTCACCGTAACTCACACAAAAGGTGCGATTGGACAATTGCAGTCGCATAAATTCCGTCATTTGCCGTATAAATCTTTTTCGTGCACAACATGTGATGGCGTATTTGTGCGTAAGCAAATGTTCTTCAAACATCTCAATCGTATAACCAATAGATGCCCATTGATGGGAAATGTAAAATTACCGAATTTTAATCCTAAAATAAAAACCTCCAATTTGAGTTTACCGCGTAAAATGGCAGGTCGCggcggcagcggcggcggcggcggcggcggcgccATGAATCCTGTGAAGAATCTCAATTTTTCAGTAACATCAAATGAAAGATGCCCTTACATCATACAATGTCCTCAATGTGGCATCAAATTCGAAAGATGGGCTCCATGGCGTGATCATATCGAAAAAGAACATGGCCTAAATAACATGGaatcattgaaatttaaaaggATTACGGATCATTTGCACATTTGTTTACAGTGTAAAGAGCGCGTGACTGGCGCAAATTTCGTAAATTTGCAGACACATCGTTTTAAACATTTACCATATGGCACCTATCTACATTGCCGCTACTGCGATGTTAGATATTACTATATGATTAACATTATCAAACACATGAAGCAAAAACATCCAAATCATGGCTTAAAGGAACTCGaattacaaattgaaaatacaaCTGACAAAGAGTCTATCGATTCTCCATCAGTCGATGTTTGCATGGAGATGGATGAGcagaaaaataatgataatgatgGTGATAATgacaaaaatgataaaaataatgagGAGAAGGAATGTACCGGTGAAGAAATGACTGATTGCGGTTACGGTTCTGAATCTTCCAAATGTTCATATATTATACATTGCCCACAATGTGATGTTAAAAATGATAATTGGCATGCATGGCGTGAACACATAGCGACAGTACATTCGTTAGATAAGCTGGATGCATTGAActttactaaaataaatgattgGTTACATGAATGCAACGAGTGTAAAGAACAAGTCAGTTCCACTTCTCTCTTCACTATGCAAACtcataaattcaaacatttgCCGTTTAGCAGTTATCTACAGTGCCGCTATTGTGACgacaaatttcattatttaatgcaCATAATAAAACATTTGAAGTCAAAACATCCCGAGCATGCAATACAAAAACACGACAAACCCATTGAATTTGATGATGGTTTGTTGGATGATGATGATATTGATGAAGAAGACGGTGAAGGAACGAAAGATAATCATGTAGACAGAGATGCGGAAGTCGATGATGACgatgaggaggaggaggagggggaggaggaggaggaggaggaagacgaagaagaagaagaagacgatgatatggatgatgatgatgaagatggCGACGATAATGATAATACAGTTGGCGCTAATGCAGAACGCATGGATGTTGATTTTGAGGATGGCGAAAACGATGATGAAGAagatgctgatgatgatgatgacgatgacgatgatgatgaagacAATGACGACGACGATGCTGGTAGTGAACATTCTGATAATGCTGATAGAGAGGTAGGTCCAGCGgttgacactgaaaatacaAATACTGACGCGCCACGAGGTGCAGTTGAAGATATTGAAGAAGTCGAAGAATCGGAACAATTTGTTCTtggttaa
Protein Sequence: MEQLFMFSNEYTVDDDNNAKKDCNKEEGRIKNCNKEEAKIKNEPEDNVVDEGEDDSYIMPESLLQQITTTQGRDAEDEDDNTIFNFGIETIANKRPTPTIALKPSSAKNPQDAFINFDLAVMYICPACGSEFDTQTAWKSHINGIHEYNTRHGLNFVPIDKLYHRCLECNKPIAMHAMENLLKHKFTHLPHRCTKCRICHRLYKYRQDLIVHLRLCHREDVIEMMSDKLDKNRYETSRTYVPPRKNTQLEIRDIKGNAIDIFENTNDSVEVKNEPFDIEDQEDEDMQGQIKPKFHQTSILEDALNRKSSQMSGQSYQANERKCEKHIEYICPVCSSEFKFKNEWRDHLQEMHNFFSFDGLGLEKRSNSTVECLECKMVLPSYSIEPLQIHKFSHLPCKTYVRCKLCSRSFQNYKGILKHLLNQHHIENEVDGDLDESQDGRSFDPFSVSSTVDFDDDQVPAHEQGKFDCRDIYETQIDYLCPKCGEEFFERKLWRNHIVQAHNYIDLKTLCFEALNEHQLQCRLCGKVITNAYGVQNAQQHYFTHLPHKAYIRCRICAKSYTDRKGLVKHLRKVHHISSKTKTKLSKPTTSFQKNTPLKAPRKEPVKEIVRHNGVIYEIKFLDEDSNNDAFMDDMSTSIEARNDYSFAKPAKRHVCPDCYSTFSTAPELQKHIREQHDFKKPTQSHVCTRCYCTFESEGALQDHKLKHHLNKSDNLENNEANDDDDLLLVPSRNEEVKVSSSTGSTNIDQYFCYMCPACGDEFKSQYEWRRHINDIHYFDRRYELNFKQLDKFHFQCLECKEIVNSGKLKALQDHKFRHLPYKLYIKCRLCSTCYNHKPNVVTHLRIRHNLIDPREMLNSSPSISPNPSQMHKIYEKQSTSSSKIFKPLTAEDIISNHNAVDHESITYRCPQCNDPFETHALWRQHIVTAHDLNSRQGLNFRQLDVHHYICLECYKRVTVTHTKGAIGQLQSHKFRHLPYKSFSCTTCDGVFVRKQMFFKHLNRITNRCPLMGNVKLPNFNPKIKTSNLSLPRKMAGRGGSGGGGGGGAMNPVKNLNFSVTSNERCPYIIQCPQCGIKFERWAPWRDHIEKEHGLNNMESLKFKRITDHLHICLQCKERVTGANFVNLQTHRFKHLPYGTYLHCRYCDVRYYYMINIIKHMKQKHPNHGLKELELQIENTTDKESIDSPSVDVCMEMDEQKNNDNDGDNDKNDKNNEEKECTGEEMTDCGYGSESSKCSYIIHCPQCDVKNDNWHAWREHIATVHSLDKLDALNFTKINDWLHECNECKEQVSSTSLFTMQTHKFKHLPFSSYLQCRYCDDKFHYLMHIIKHLKSKHPEHAIQKHDKPIEFDDGLLDDDDIDEEDGEGTKDNHVDRDAEVDDDDEEEEEGEEEEEEEDEEEEEDDDMDDDDEDGDDNDNTVGANAERMDVDFEDGENDDEEDADDDDDDDDDDEDNDDDDAGSEHSDNADREVGPAVDTENTNTDAPRGAVEDIEEVEESEQFVLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00304100;
90% Identity: -
80% Identity: -