Basic Information

Insect: Ceratitis capitata
Gene Symbol: -
Assembly: GCA_000347755.4
Location: NW:403440-409520[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.015 0.74 9.9 0.0 1 23 113 136 113 136 0.95

2 16 1.3 66 3.7 9.0 2 23 185 207 181 207 0.92

3 16 0.047 2.4 8.3 0.1 1 23 321 344 321 344 0.95

4 16 0.018 0.9 9.6 0.1 1 23 471 494 471 494 0.90

5 16 0.49 25 5.1 0.0 2 14 513 525 512 529 0.83

6 16 0.00013 0.0064 16.4 2.4 2 23 545 567 544 568 0.96

7 16 0.00016 0.008 16.1 0.5 1 23 653 676 653 676 0.96

8 16 1.8 93 3.3 5.9 1 23 685 707 685 708 0.94

9 16 6.6e-05 0.0034 17.2 0.1 1 23 753 776 753 776 0.95

10 16 0.1 5.1 7.2 4.0 2 23 826 848 825 848 0.96

11 16 0.013 0.65 10.0 0.2 1 23 909 932 909 932 0.97

12 16 0.006 0.31 11.1 1.0 1 21 984 1004 984 1005 0.95

13 16 0.0015 0.074 13.0 0.0 2 23 1063 1085 1062 1085 0.95

14 16 0.5 25 5.1 2.1 2 23 1135 1157 1134 1157 0.94

15 16 0.32 16 5.7 1.1 1 23 1276 1300 1276 1300 0.94

16 16 0.37 19 5.5 0.5 2 23 1308 1330 1307 1330 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.015	0.74	9.9	0.0	1	23	113	136	113	136	0.95
2	16	1.3	66	3.7	9.0	2	23	185	207	181	207	0.92
3	16	0.047	2.4	8.3	0.1	1	23	321	344	321	344	0.95
4	16	0.018	0.9	9.6	0.1	1	23	471	494	471	494	0.90
5	16	0.49	25	5.1	0.0	2	14	513	525	512	529	0.83
6	16	0.00013	0.0064	16.4	2.4	2	23	545	567	544	568	0.96
7	16	0.00016	0.008	16.1	0.5	1	23	653	676	653	676	0.96
8	16	1.8	93	3.3	5.9	1	23	685	707	685	708	0.94
9	16	6.6e-05	0.0034	17.2	0.1	1	23	753	776	753	776	0.95
10	16	0.1	5.1	7.2	4.0	2	23	826	848	825	848	0.96
11	16	0.013	0.65	10.0	0.2	1	23	909	932	909	932	0.97
12	16	0.006	0.31	11.1	1.0	1	21	984	1004	984	1005	0.95
13	16	0.0015	0.074	13.0	0.0	2	23	1063	1085	1062	1085	0.95
14	16	0.5	25	5.1	2.1	2	23	1135	1157	1134	1157	0.94
15	16	0.32	16	5.7	1.1	1	23	1276	1300	1276	1300	0.94
16	16	0.37	19	5.5	0.5	2	23	1308	1330	1307	1330	0.95

Sequence Information

Coding Sequence: atggatcaacTACATTTTATGTTTGCAAATGATTATAAAGTGGACGACGATAATAACGCTAAGAATGATTGTAACAAAAAGgaagcgaaaattaaaaatgagccTGAAGACGATGTCgttgaagaagaagatgatAGCTATATAATGCCAGAATCATTGCTGCAGCAAATAACTACTACGCAAGGAAAAGATGCGGAGGGTGAAGATGATAATACAATATTCAATTTTGGAATCGAAACAAGTGCAAATAAGCGTCCTACTCCTACGATTGCATCTAAGCCATCTTCAGCAAAAAACCCACAAgatgcatttattaattttgatttagcTGTAATGTATATATGCCCAGCTTGTGGTAGTGAATTTGATACTCAAACCGCTTGGAAGACACACATTAATGGCATTCATGAATACAATACACGCCGCGGATTAAATTTTGTACCAATTGATAAATTATATCACAGGTGTCTGGAGTGCAATAAACCGATTGCAATGCATgctatggaaaatttattgaaacataAATTTACACACTTGCCCCATCGATGTACCAAATGTAGGATTTGCCACAGACTTTATAAATATAGGCAAGATTTAATTGTACATTTACGTCTATGTCATCGTGAGGATGTAATAGAAATGATGGGTGATACAAATAAGGTTGagaaaaacatatatgaaaatttacgcACTTATGTTCCCccaagaaaaaatccaaaactaGAAATCAGGGATATTAAAGGTAACGCAattgatatatttgaaaatactaaTGACAGCGTTGAGGTAAAAAATGAACCCTTTGATGCTGATGACCAAGAAGACGAGGTTATGCAATACCGAAATAAGCCAAAATTCCATCAAACCTCTATTTTGGAGGACGCATTAAGCCGAAAAACTTCACAAGTGTCTGGGCACCCTCAGCAAGCCCATGAGAGACAATGGGAAAAACATATAGAGTACATTTGCCCTGTTTGCAACTCTGAGTTTAATCTAAAAAATGATTGGAGGGATCATCTCCAAGAAATGCAtaactttttttcctttgatGGATTGGGATTAGAAAAACGTAGTAACTCAACAGTTGAATGTTTAGAATGCAAAATGgttTTACCTAGTTACTCTATAGAGCcgttacaaatacataaattttcgcATCTCCCTTGCAAAACATATATGCGCTGTAAACTTTGCTTACGTTCATTTCATATCTACAAAGgtataataaaacatttcatgAAACAACATCGTCTGGAAAAAGAATTCAACGCCGATGCAGATGAGAGCCAAGATGGTCGTTCTTTTGACCCATACTCTGTGTCATCTACTGTGGACTTTGACGATGATCAAGTACCAGCTGACGAACAAGGAAAATTCGATTGTCGTGATATTTACGAAACACAAATAGATTATTTATGTCCAAAGTGTGgtgaagaattttttgaaagaaaattgtgGAGAAATCACATCGTTCAAGCCCATAACTATACTGATTTGAAAACACTTTGTTTTGAAGCTGTGAATGAGCATCAATTACAATGTCACTTATGTGGTAAAGTGATTACAAATGCTTACGGTGTGCAAAACGCTCAGCAACACTATTTCACACATTTGCCCCATAAGGCATACATTCGTTGTCGGATATGTACCAAATCATACACAGATCGTAAGGGATTAGTTAAACATTTGCGCAAAGTTCATCATATATCTTCTAAAACAATGTCACCATTATCTAAACCCGCTGAAACAAAGTCTCACTCGTCGTCATCATTTCAGAAAAGCACTCCATTCAAAGCTCCGCGTAAAGCACCAGTTAAAGAAATTGTACGACACAATGGTGttatatatgaaatacaatttttagatGAGGATAGTAATGATGACACTTTTATGGACGATACATCAACCTCGATAGAAGCCAAAAATGATTACAGCTTCACAAAGCCTCCAAAAAGGCATGTGTGTCCTGATTGTTATTCCACGTTTGGTACCGCACAAGAATTACAAAGGCATATTCGAGAACAACACGACTTCAAAAAGCCCATACAATCTCATGTTTGCACTAGGTGCTATTGTACCTTCGAATCCGAGGGCGCTTTGTATGATCATAAACTAAAGCATCACTCAAACAATTCAGATAACTTAGAAAATAATGAAGCTAATGACGATGATGACTTGCTGTTGGTGCCAAGTAGGAATGAGAATGTAAAGGTTAGTTCCAGCACTGGTTCAACCAACATAgaacaatatttttgctatatgTGCCCTGCGTGCGGTGAGGAATTCAAATCGCAATATGAATGGCGTCGTCATATTAATGATATACATTACTTCGATAGACGTTATGAGttgaatttcaaacaaatagataaatttcactttgagtGTTTAGAATGCAAAGAAATTGTTAATAGCCCTAAATTAAAAGCTCTACAAGACCATAAATTTCGCCACTTGCCGTATAAATTATACATCAAGTGCCGCCTTTGCAGCACTTGCTACAATCATAAACCAAATGTGGTTACACATCTACGTATACGGCACAATTTAATGGATCCTCGTGAAATACTTAATAACAGTCCATCAGTATCACCAAGCCCATCGCAAATGGCCGAAAACTATGAGAAAGAATCCACATCACCTTCACAATTGTTCAATATTCGTTCGATGACAACCGAAGACATTATTTCGAATCACAATGCAGTAGATCACGAATCGATTACTTATCGTTGTCCGCAATGTAATGACCCATTTGATACGCACGCTCTGTGGCGGCAACATATCGTTACCGCACATGACCTCAACAGCAGACAGGGCTTGAATTTCCGTCAGTTGGATGCACACCACTATATATGCTTGGAGTGTTACAAGCGCGTCACGGTAACTCACACGAAAGGTGCGATTGGTCAATTGCAATCGCATAAATTTCGCCATTTACCGTATAAATCTTTTTCCTGCACAACTTGTGACGGAGTCTTTGTGCGTAAGCAAATGTTCTTCAAACATCTCAATCGTATAACCAATAGATGCCCATTATTGGGAAATGTAGGAGTACACAATtataatccaaaaataaaagcttcccaTTTGAATGTATCACGTAAAATGGCAGGTCACGGCGGTAGCACTCCTGCGAAGAATCTCAATTTTTCTGTGACATCGAATGAAAGATGTCCTTACATCATACAATGCCCTCAATGTGGCATCAAATTCGAAAGATGGGCCCCATGGCGTGATCATATCGAAAAAGAGCATGCTCTACATAGTATGGAATCATTGAAATTCAGGAGGATCACGGATCATTTGCACATCTGTCTGCAGTGCAAAGAGCGCGTTACTGGTGCAAATTTCGTCAATTTGCAGACTCATCGATTTAAACATTTACCATATGGTACCTACCTACATTGCCGCTACTGCGATGTTAGATATTACTATATGATTAATATTATCAAACACATGAAACAGAAGCATCCAAATCATGGCTTAAAGGAACTCGaattgcaattagaaaagaCGCCTGTCAAAGAGCCCATCGACTCTCCATCAGCCGATCTTTGCATGGAGCTGAATGAGGAGAAAAACAATGATAATATTGCCGATGATGAAGACGATGCAGAAAAAATTGGTCTAGAACATGAGAAGAAAGGTACCAGTGAAGACATGATTGGTTCCGATTCTGAATCACAAAAATGTTCGTTCATTATATATTGTCCACAATGTGGTGTTGAAAATGATAATTGGCCTGCATGGCGTGAACATATAGCGGCGGTACATTCGTTTGATAAGCTGGATGCATTGAActttaccaaaataaaagatTGGGTTTTTGAATGCAACGAGTGTAAAGAGCAAGTCAATTTCAATTCACTCTACACTCTGCAGATTCACAAATTCACGCATTTGCCATATAGCAGCTATCTACAGTGTCGCTATTGTGACGAAAAATTAGATAATGTAATGGACATAATGAAACATTTGAAGTCAAAACATCCTGAACATGTAATACAAAAGCACGATAAACCCATTGAATTGGATGATGTTTTGTcgtatgatgatgatgatgatgatattgaTGAAGATGAAGGTGAAGGAACGAGAGATAATTTAGATATAGAAGAGGGAGTCGATGATGGCGATGAGGAGGAGGACGATGAAAtagatgacgatgatgatgatgacgacgaaGATAATGACAATACTGTCGGCGATAATGCAGTACGCATGGATGTTGATGATTTCGAGGATGCAGAAGACGAAGATGAAGaagatgttgatgatgatgatgacgttgGAGATGATGAAGACAATGAGGATGATGATGGTGgcagtgaaaattttgataatactGATACGGAGGTAGGTCCAACGGGtgacagtgaaaatacaaatactGAAGTGCCACGAGGTGCCGTTGAAGATATTGAAGAGGTCGAAGAATCGGAGCAATTTGTTCTGGGCTAA
Protein Sequence: MDQLHFMFANDYKVDDDNNAKNDCNKKEAKIKNEPEDDVVEEEDDSYIMPESLLQQITTTQGKDAEGEDDNTIFNFGIETSANKRPTPTIASKPSSAKNPQDAFINFDLAVMYICPACGSEFDTQTAWKTHINGIHEYNTRRGLNFVPIDKLYHRCLECNKPIAMHAMENLLKHKFTHLPHRCTKCRICHRLYKYRQDLIVHLRLCHREDVIEMMGDTNKVEKNIYENLRTYVPPRKNPKLEIRDIKGNAIDIFENTNDSVEVKNEPFDADDQEDEVMQYRNKPKFHQTSILEDALSRKTSQVSGHPQQAHERQWEKHIEYICPVCNSEFNLKNDWRDHLQEMHNFFSFDGLGLEKRSNSTVECLECKMVLPSYSIEPLQIHKFSHLPCKTYMRCKLCLRSFHIYKGIIKHFMKQHRLEKEFNADADESQDGRSFDPYSVSSTVDFDDDQVPADEQGKFDCRDIYETQIDYLCPKCGEEFFERKLWRNHIVQAHNYTDLKTLCFEAVNEHQLQCHLCGKVITNAYGVQNAQQHYFTHLPHKAYIRCRICTKSYTDRKGLVKHLRKVHHISSKTMSPLSKPAETKSHSSSSFQKSTPFKAPRKAPVKEIVRHNGVIYEIQFLDEDSNDDTFMDDTSTSIEAKNDYSFTKPPKRHVCPDCYSTFGTAQELQRHIREQHDFKKPIQSHVCTRCYCTFESEGALYDHKLKHHSNNSDNLENNEANDDDDLLLVPSRNENVKVSSSTGSTNIEQYFCYMCPACGEEFKSQYEWRRHINDIHYFDRRYELNFKQIDKFHFECLECKEIVNSPKLKALQDHKFRHLPYKLYIKCRLCSTCYNHKPNVVTHLRIRHNLMDPREILNNSPSVSPSPSQMAENYEKESTSPSQLFNIRSMTTEDIISNHNAVDHESITYRCPQCNDPFDTHALWRQHIVTAHDLNSRQGLNFRQLDAHHYICLECYKRVTVTHTKGAIGQLQSHKFRHLPYKSFSCTTCDGVFVRKQMFFKHLNRITNRCPLLGNVGVHNYNPKIKASHLNVSRKMAGHGGSTPAKNLNFSVTSNERCPYIIQCPQCGIKFERWAPWRDHIEKEHALHSMESLKFRRITDHLHICLQCKERVTGANFVNLQTHRFKHLPYGTYLHCRYCDVRYYYMINIIKHMKQKHPNHGLKELELQLEKTPVKEPIDSPSADLCMELNEEKNNDNIADDEDDAEKIGLEHEKKGTSEDMIGSDSESQKCSFIIYCPQCGVENDNWPAWREHIAAVHSFDKLDALNFTKIKDWVFECNECKEQVNFNSLYTLQIHKFTHLPYSSYLQCRYCDEKLDNVMDIMKHLKSKHPEHVIQKHDKPIELDDVLSYDDDDDDIDEDEGEGTRDNLDIEEGVDDGDEEEDDEIDDDDDDDDEDNDNTVGDNAVRMDVDDFEDAEDEDEEDVDDDDDVGDDEDNEDDDGGSENFDNTDTEVGPTGDSENTNTEVPRGAVEDIEEVEESEQFVLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045828;
90% Identity: -
80% Identity: -