Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: L
Assembly: GCA_030068015.2
Location: CM061527.1:54694640-54717201[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.5e-06 0.00045 20.8 1.7 1 23 187 209 187 209 0.98

2 18 0.55 38 5.3 5.8 1 23 215 237 215 237 0.98

3 18 2.8e-07 2e-05 25.0 3.1 1 23 243 265 243 265 0.99

4 18 1.3e-05 0.0009 19.8 0.3 1 23 271 293 271 293 0.98

5 18 1.1 73 4.4 1.4 2 23 357 380 356 380 0.90

6 18 0.0084 0.58 11.0 0.4 3 23 410 431 408 431 0.95

7 18 0.11 7.3 7.5 0.9 1 23 522 544 522 544 0.97

8 18 2.4e-05 0.0017 19.0 0.4 1 23 581 606 581 606 0.93

9 18 1.7 1.2e+02 3.7 0.1 1 19 611 629 611 631 0.90

10 18 0.051 3.5 8.5 2.1 1 23 641 663 641 664 0.95

11 18 0.0017 0.12 13.1 1.9 1 23 701 723 701 724 0.96

12 18 2.6 1.8e+02 3.1 0.2 1 23 898 922 898 922 0.87

13 18 0.0012 0.085 13.6 4.6 2 23 931 953 930 953 0.96

14 18 0.14 9.9 7.1 0.1 1 23 959 981 959 981 0.92

15 18 0.048 3.3 8.6 0.4 2 23 989 1010 988 1010 0.96

16 18 0.23 16 6.4 0.5 2 23 1108 1129 1108 1129 0.94

17 18 0.00031 0.021 15.5 0.6 1 23 1139 1161 1139 1161 0.96

18 18 1.3 88 4.1 1.2 1 23 1168 1190 1168 1190 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.5e-06	0.00045	20.8	1.7	1	23	187	209	187	209	0.98
2	18	0.55	38	5.3	5.8	1	23	215	237	215	237	0.98
3	18	2.8e-07	2e-05	25.0	3.1	1	23	243	265	243	265	0.99
4	18	1.3e-05	0.0009	19.8	0.3	1	23	271	293	271	293	0.98
5	18	1.1	73	4.4	1.4	2	23	357	380	356	380	0.90
6	18	0.0084	0.58	11.0	0.4	3	23	410	431	408	431	0.95
7	18	0.11	7.3	7.5	0.9	1	23	522	544	522	544	0.97
8	18	2.4e-05	0.0017	19.0	0.4	1	23	581	606	581	606	0.93
9	18	1.7	1.2e+02	3.7	0.1	1	19	611	629	611	631	0.90
10	18	0.051	3.5	8.5	2.1	1	23	641	663	641	664	0.95
11	18	0.0017	0.12	13.1	1.9	1	23	701	723	701	724	0.96
12	18	2.6	1.8e+02	3.1	0.2	1	23	898	922	898	922	0.87
13	18	0.0012	0.085	13.6	4.6	2	23	931	953	930	953	0.96
14	18	0.14	9.9	7.1	0.1	1	23	959	981	959	981	0.92
15	18	0.048	3.3	8.6	0.4	2	23	989	1010	988	1010	0.96
16	18	0.23	16	6.4	0.5	2	23	1108	1129	1108	1129	0.94
17	18	0.00031	0.021	15.5	0.6	1	23	1139	1161	1139	1161	0.96
18	18	1.3	88	4.1	1.2	1	23	1168	1190	1168	1190	0.94

Sequence Information

Coding Sequence: ATGGCGGTAAAGATGCTCTATCGAGGACCAAGTTCGAAACTTgagaatttaatagaaaaaatacaagcTACAAAGGAGATTGGAACTGCAGATATGTATTCCACGCACACCTCTTCAAATTACTCACCCTCAGTATCAGATGGCACGTTAACACCAAACTCTTTACAACACCAAGAACATCACTCACATTCACAAtcaattcaatattttccaCAACAGAATACTGACGGAGACACTAGTCACAGCGGTAGTCAGCGAAAAGCAAAACACACTGCAAAAGATGAAGGAATTGAAGAAAATGAGGTGGGTGGTAATGGAGATGTCAACTGTTCTGAAAACAACTCGGCTGATACACTCAACACCGCACAAGTAGAAAAAAATGCCAACATagatacacaaaataaaagacAAGCGCGTCTTCATCGTCAGCACCTTTACCACCACGGCGAATATCACAGTTCGAAGATTATAACAAAACTGCGAAAAATCGAAAGAGTCGCTACAAAGTTTGATAAGTTGACAGGCGACGGCATTAAGGGTAACAGCGTTGATGGTTCTTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACTTGGTTATTTGAAAAAGCACGAACAGAGTCATGCCGAACATCTGCCTTTTAAATGTGATTACTGCGCTCGACTATTTAAGCACAAGAGATCAAGGGATCGACACACCAAACTACATACCGGGGATCGCCGTTACCGCTGTCCTCACTGTGAAGCTGCTTTTTCTCGaagcgaTCATCTCAAAATCCATATGAAAACTCATGATAATCAGAAACCATTTCAATGCACTATATGCAATCGTGGGTACAATACCGCTGCGGCACTGACATCGCATATGCAAAATCATAAGAAACAGGCAGCTATCCTAGCGGCCGGTGGAAACCCACAGGCACTCAATTATAGCCCCCGATCAAGTGGATCAGTTTCCAGTAGTGGAAGTTTCCATAAAAGGCGCTATGCTGCGGCTTTAATTCATACCGATAGTAAGTCAAACCGATTGGAGCATCCAAAACGACCACGAACTGTCAATCTTTTAACGTGCAACTATTGCTCTAAAACTGAATTCAACTCCATCGATCAGCTGGACATTCATATTCACACAAAGCatgagaaagaaatattttcaacacaaaaaatacaacaacaggtAACTCCTAATAGTAGTTTTTCAGAGCAGACTTCATTCCAAATGTGTTGCGAATATTGCACCATGCAATTTGGAAATCTTCCCGCACTATTTCAACACATACGCATCGCACATGTCGACCGATTATCAAGTCCCAACTCTTACTTTGAGCATTTTAATCGGTTGGCGGCATCTGGAACTTTTAGTCCTCGTTTAGTGACTGATAGAACAGTTTTGAGGGAGGGTAGCATACCGAAACGGAATAATATAAAGCAGGAACAAATCCTAACGTCGGTAGATGCCAGAGATGAAAAGCTAGAAGAAGAGCCCACTGACCTTAGTCAAAATAAACGACGCTCACCGACTCCAGTATCTACGACAGAGGAGTCTTTTCAACCCGATATGTTCTTTTGCAACCAATGTAATGCTGGCCTACCAGATTTTGAGAAGTTCCGAAGTCATTTAAAAACGCATATAACTCAAGGATTAAATCTTATTTGTCATCATTGTGGTTTGGCGTTGCAAGAGCCATCTGAGCACGAACACCATGTGATCTCACATTATTTAATCTCTTACTCGGAATATATTTGTGAATATAGCAAGTGTGATAAATCGTTTTCAAAGCCAGAAGAACTTCAAAGTCATATGCTAGACCAACATACAATTTCTATGTTCAAATGCTCCGTTTGCTCTGAACTCTTTGAGTCAAAAATGGCAATTCAAATGCATTTCGCTTGTACACATTCCATTGAAACAAAATCTTTCCGTTGCTCAGCTTgtatggaaatatttaaatctgAGAGTGAGTTCAATAATCACGTTAAATCGCACCACCCGGGGCTGAATGGACCAGTACCCAACTCACTTCAATGTATGTTTTGTCGAACTGTGTGTTCAAATGAATTAGAAATGCATTTCCATCTTGCTGCACATGCACGCCAATTTCAGTGCCCATCATGCCCAGAAACATTTCATGTGGAATTTCTCTTGGATCGGCATATGCAAATTCATCACACTGGCAATACTCGCACAGTGTTACCTACAAAAGgaacatttgaagaaatatcaacACCGTCAAATGTGCCGAATCATATTAATTCACTCTATATGAATGCTTTACTGAGCAAAACTCCACAAATGCAGATATCTtcgcaaaacaacaacactagCGTTCTTGACTACAACATTGCGTTCGCCGCACATCTTAATAAGAGCATTTTCCCAGGTCCTACAGCAGTAGCGCCTTTGGCCGATGGTAAGTTCTACAATGCATTACAAGTCGACACAGGCGCAGTTAAGCAGCCGGGACTTATTTATGGTCTAAGCCAACGCTATTTCGACACAAGTCGAACATTGATAGAAATGTATACGCAGCAAAGATTGGAAAACCCATCAACCGTGGAAAACTATTACAACAGCACGAAACCGCAGCCAATCGCACAGCATTTAAAATCTAAACCAGATTTACAACAAAATCGATCACCAGCAGAGCCGATAATACCAACGTCGGTAGCTACAAGTTCTTCCATGTGTTTCAGTTGTGATATTTGCGAACGCAATGATTTTCGATCGGAAGGAGAAGTGAATTCCCACCGAAAGATTGTACATAATATGAAAACAGGAGTTAGTCTACGTTGTGCATATTGCTCAGGAAATTTTAAGTCTCGAAGTGAGTTGGAGCATCATATGAAGACTTGCCATAACTCTACCGGAAAACATAAATGTCTAATATGCGATGAAATTTTCCCTTCACCTGCTATATTAGCAGAACATAAACTGCAACACTCTAAAGTTGGCCAATCGGGGAAATGTTCACACTGCAGTAAGACATTGGACGATGTTGCAGCTTATAAAGCCCACCTTAGTGAACATAACAATGAGAGTCAGCTTCCCATGCAATGTATCTGCTGTCGACAGTCACTGCATTCAGATTTCGAGATCACCATACATGCCCAgtttcATACCAAATCTTCGAACAATCCCGAAAGCGTGTGTGCCCTCTGCTTAGAACCCATCCCTAATGCAAACAATGGTGAGGCCAAAGTTTGTGAGAACTGCTGCCGGAAGCATAAATTGGGTGGAAAATTCAATACCAAGCGCATACGAAACGAACTTTTTGAACATGTACCAGAAGTTCGCCGGAATACATTGACAACCGAAAATCGATGTAATATCTGCAAACTGATGTTACCCCATGCCCAAAAACTGCAGGAGCATTTGGTGGAGCACACCTTTGCTGGTTGTGAAGAACGTGGTTTCAACTGTTACATATGCTCTGCCGTTTTTACAACACCAGGCAGCTTACTAACTCATATGCATGAGCACGGGCCTCAGTGTCGGCCTTATGACTGTAATTTATGTAGTGACAAGTATTTTTTCCGGGCTGAACTTGAGCATCATTTACTAGCTCATGAGGCACAGAATACTTTTGAGTTGGAAAAGAAAGAAAgggataaagaaaaatttgtttcgttTCCCAAAGCGTCCGAAAACTCATTGTCCTATCCAAAAGTTAAGAAAGAAATCTTGGTAAATGATGATAAGATCCAAACTGGAGAAGAAGATGAGTACATCGAAATTGAAAATCTTAACGACGTTCATCACGCTTATAATTCAACGCAGCAAAGTTATGATACttcaaaagaaaacacaaaGGGAAAAAACGAAACATCAGAGTAA
Protein Sequence: MAVKMLYRGPSSKLENLIEKIQATKEIGTADMYSTHTSSNYSPSVSDGTLTPNSLQHQEHHSHSQSIQYFPQQNTDGDTSHSGSQRKAKHTAKDEGIEENEVGGNGDVNCSENNSADTLNTAQVEKNANIDTQNKRQARLHRQHLYHHGEYHSSKIITKLRKIERVATKFDKLTGDGIKGNSVDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSSGSVSSSGSFHKRRYAAALIHTDSKSNRLEHPKRPRTVNLLTCNYCSKTEFNSIDQLDIHIHTKHEKEIFSTQKIQQQVTPNSSFSEQTSFQMCCEYCTMQFGNLPALFQHIRIAHVDRLSSPNSYFEHFNRLAASGTFSPRLVTDRTVLREGSIPKRNNIKQEQILTSVDARDEKLEEEPTDLSQNKRRSPTPVSTTEESFQPDMFFCNQCNAGLPDFEKFRSHLKTHITQGLNLICHHCGLALQEPSEHEHHVISHYLISYSEYICEYSKCDKSFSKPEELQSHMLDQHTISMFKCSVCSELFESKMAIQMHFACTHSIETKSFRCSACMEIFKSESEFNNHVKSHHPGLNGPVPNSLQCMFCRTVCSNELEMHFHLAAHARQFQCPSCPETFHVEFLLDRHMQIHHTGNTRTVLPTKGTFEEISTPSNVPNHINSLYMNALLSKTPQMQISSQNNNTSVLDYNIAFAAHLNKSIFPGPTAVAPLADGKFYNALQVDTGAVKQPGLIYGLSQRYFDTSRTLIEMYTQQRLENPSTVENYYNSTKPQPIAQHLKSKPDLQQNRSPAEPIIPTSVATSSSMCFSCDICERNDFRSEGEVNSHRKIVHNMKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSKTLDDVAAYKAHLSEHNNESQLPMQCICCRQSLHSDFEITIHAQFHTKSSNNPESVCALCLEPIPNANNGEAKVCENCCRKHKLGGKFNTKRIRNELFEHVPEVRRNTLTTENRCNICKLMLPHAQKLQEHLVEHTFAGCEERGFNCYICSAVFTTPGSLLTHMHEHGPQCRPYDCNLCSDKYFFRAELEHHLLAHEAQNTFELEKKERDKEKFVSFPKASENSLSYPKVKKEILVNDDKIQTGEEDEYIEIENLNDVHHAYNSTQQSYDTSKENTKGKNETSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00303991;
90% Identity: iTF_00303991;
80% Identity: -