Basic Information

Insect: Ceratitis capitata
Gene Symbol: L
Assembly: GCA_000347755.4
Location: NW:240247-259734[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 5.1e-06 0.00026 20.7 1.7 1 23 191 213 191 213 0.98

2 19 0.43 22 5.3 5.8 1 23 219 241 219 241 0.98

3 19 2.2e-07 1.1e-05 25.0 3.1 1 23 247 269 247 269 0.99

4 19 1e-05 0.00052 19.8 0.3 1 23 275 297 275 297 0.98

5 19 0.2 10 6.3 0.5 2 23 361 384 360 384 0.91

6 19 0.0024 0.12 12.4 0.2 2 23 413 435 412 435 0.96

7 19 0.084 4.2 7.5 0.9 1 23 526 548 526 548 0.97

8 19 2.2 1.1e+02 3.0 1.3 2 23 556 577 555 577 0.90

9 19 2.5e-05 0.0012 18.6 0.4 1 23 585 610 585 610 0.93

10 19 1.3 66 3.7 0.1 1 19 615 633 615 635 0.90

11 19 0.039 2 8.5 2.0 1 23 645 667 645 668 0.95

12 19 0.0018 0.09 12.8 2.4 1 23 705 727 705 728 0.96

13 19 1.6 79 3.5 0.2 1 23 902 926 902 926 0.88

14 19 0.00097 0.049 13.6 4.6 2 23 935 957 934 957 0.96

15 19 0.11 5.7 7.1 0.1 1 23 963 985 963 985 0.92

16 19 0.097 4.9 7.3 0.2 2 23 993 1014 992 1014 0.96

17 19 0.15 7.4 6.7 0.5 2 23 1112 1133 1111 1133 0.94

18 19 8.6e-05 0.0043 16.9 0.9 1 23 1143 1165 1143 1165 0.96

19 19 1 51 4.1 1.2 1 23 1172 1194 1172 1194 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	5.1e-06	0.00026	20.7	1.7	1	23	191	213	191	213	0.98
2	19	0.43	22	5.3	5.8	1	23	219	241	219	241	0.98
3	19	2.2e-07	1.1e-05	25.0	3.1	1	23	247	269	247	269	0.99
4	19	1e-05	0.00052	19.8	0.3	1	23	275	297	275	297	0.98
5	19	0.2	10	6.3	0.5	2	23	361	384	360	384	0.91
6	19	0.0024	0.12	12.4	0.2	2	23	413	435	412	435	0.96
7	19	0.084	4.2	7.5	0.9	1	23	526	548	526	548	0.97
8	19	2.2	1.1e+02	3.0	1.3	2	23	556	577	555	577	0.90
9	19	2.5e-05	0.0012	18.6	0.4	1	23	585	610	585	610	0.93
10	19	1.3	66	3.7	0.1	1	19	615	633	615	635	0.90
11	19	0.039	2	8.5	2.0	1	23	645	667	645	668	0.95
12	19	0.0018	0.09	12.8	2.4	1	23	705	727	705	728	0.96
13	19	1.6	79	3.5	0.2	1	23	902	926	902	926	0.88
14	19	0.00097	0.049	13.6	4.6	2	23	935	957	934	957	0.96
15	19	0.11	5.7	7.1	0.1	1	23	963	985	963	985	0.92
16	19	0.097	4.9	7.3	0.2	2	23	993	1014	992	1014	0.96
17	19	0.15	7.4	6.7	0.5	2	23	1112	1133	1111	1133	0.94
18	19	8.6e-05	0.0043	16.9	0.9	1	23	1143	1165	1143	1165	0.96
19	19	1	51	4.1	1.2	1	23	1172	1194	1172	1194	0.94

Sequence Information

Coding Sequence: atgAGAGTTGTAATGGCGGTAAAGATGCTCTATCGAGGACCAAGTTCGAAACTTgagaatttaatagaaaaaattcaggCTACAAAGGAGATTGGAACTACAGATATGTACTCCACGCACACCTCTTCTAATTACTCACCCTCAGTATCAGATGGCACGTTAACACCAAACTCATTGCAACACCAAGAACATCACTCACACTCCCAATCAATGCAATATTTTCCACAACAGAATACTGACGGAGACACCAGTCGCAGAGTTAATCAGCGAAAGGGGTTATACACGACAAAGGATGAAGGAACTGAAGAAAATGAAGTGGGTGGTAATGGAGATGTCAAAAGTTCTGAAAATAATTCCGCTGATACACTCAATGCTGCGCAACTAGAAAACAATGCCAACGCAGATACACAACACAAAAGACAAGCGCGCCTTCATCGGCAGCACCTTTACCACCACGGCGACTATCACAGCtcgaaaattataacaaaactgCGAAAAATCGAAAGAGTCGCTACAAAGTTTGATAAGTTGACAGGCGATGGCATTAAGGGTAACACCGTTGATGGCTCTTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGACttggttatttaaaaaaacacgaACAGAGCCATGCCGAGCATCTACCCTTTAAATGTGATTATTGCGCTCGACTGTTTAAGCACAAGAGATCGAGGGATCGACACACTAAACTGCACACCGGGGATCGCCGTTACCGCTGCCCTCACTGTGAGGCTGCTTTTTCTCgaagcgaTCATCTCAAAATCCATATGAAAACTCATGATAATCAGAAACCATTTCAATGCACGATATGCAATCGTGGGTACAATACCGCCGCGGCACTGACATCGCATATGCAAAACCATAAAAAGCAGGCAGCTATCCTAGCTGCCGGTGGAAACCCACAAGCGCTCAATTATAGCCCCCGATCCAGTGGATCAGTCTCCAGTAGTGGAAGCTTTCATAAAAGGCGCTATGCTGCGGCATTAATTCATACTGAAAATAAGTCAAACCGGTTGGAACACCCAAAGCGACCTCGGACTGTCAATCTTTTAACGTGTAACTATTGCTCCAAAACTGAATTCAACTCCATTGATCAGTTGGACATTCATATACAAACAAAGCatgagaaagaaatattttcaacacaaaaaatacaacaacagacaaCTCCTAACAGTACTTTCTCAGACCAGAGTTCATTTCAGCTGCGTTGTGAATATTGCACTATGCAATTTGGAAATCTTCCTGCACTATTTCAACACATACGCATCTCCCATGTCGACCGATTGGCCAGTCCCAACTcttattttgagcatttcaaTCGCTTGGCTGCATCTGGAACTTTCAGTCCTCGCTTAGTAACTGACAAAACAGCCTTGAAGGAGGGCAACATAGcgaaacgaaataatataaagcaggAACAGATCGTACCTTCAGTAAATGCCAAAGATGAAAAACAAGAGGAAGAACCCACTGACCTTAGTCAAAATAAACGACGCTCACCGACCCCAGTATCAACGACAGAGGAGTCTTTTCAACCCGACATATTCTTTTGCAACCAATGCAATGCTGGCCTACCAGATTTTGAGAAGTTCCGAAGTCATTTAAAAACGCACATAACTCAAGGATTAAATCTTATTTGTCATCATTGTGGTTTGGCGTTACAAGAGCCATCTGAGCACGAACGCCACGTAATCTCGCATTATTTAATCTCTAACTCTGAATATGCTTGTGAATACAGCAAATGTGATAAATCTTTTTCAAAGGCAGATGAGCTGCAAAGCCACATGTTGGATCAGCATACAATTTCCATGTTCAAATGCTCGGTCTGCTCTGAGCTCTTTGAGTCGAAAATGGCAATTCAAATGCATTTCGCTTGCACACATTCTGTCGAAACAAAATCTTTCCGTTGCTCAGCTTGTATGGAAATATTTAGATCTGAGAGTGAGTTCAATAATCACGTTAAATCGCATCACCCGGGGCTGAATGGACCAGTTCCCAACTCACTTCAATGTATGTTTTGTCGAACTGTGTGCTCAAATGAATTAGAAATGCATTTTCATCTTGCCGCACATGCACGCCAATTTCAATGCCCATCATGCCCGGAAACATTTCACGTGGAATTTCTGTTGGACCGGCATATGCAAAGCCATCATAGTGGCAATACTCGACCAGTGTTATCTTCAAAAGGAACATTTGAAGATGCATCGACACCATCAAATGTACCGAATcaaattaattcactttatatGAATGCTTTGTTAAGTAAAACTCCACAAATGCCGATTTCCTcacaaaataacaacacaagCATTCTTGACTACAACATTGCGTTTGCCGCACATCTTAATAAGAGCCTCTTCCCCGGTCCCACAGCAGTGGCTCCTTTGGCCGATGGTAAGTTCTATAATGCTTTGCAAGTCGATACAAGCACCGTTAAGCATCCGGGACTTATGTATGGCTTAAGCCAACGCTATTTCGACACAAGTCGAACCTTAATAGAGATGTATACTCAGCAAAGGATGGAAAAACCAACAACCGTGGAAAACTATTACAACAGCCCGAAACCACAGCCAATCGCTCAGCACCTAAAATTGAAACCAGATTTGCATCAAAATCGATCCCCAGCAGAATCGATAATACCGACGTCGGTAGCTTCAAGTTCTTCCATGTGTTATAGTTGTGATATTTGCGAACGCAATGATTTTCGGTCGGAAGGAGAAGTGAATTCCCACCGAAAGATTGTACATAATATGAAAACAGGAGTTAGTCTACGTTGTGCATATTGCTCAGGAAATTTTAAATCTCGTAGTGAGTTGGAGCATCATATGAAGACTTGTCATAACTCCACTGGAAAACATAAGTGTTTAATATGCGACGAAATTTTCCCTTCACCCGCTATATTGGCGGAACACAAGTTGCAACACTCTAAAGTTGGTCAATCGGGGAAATGTTCACATTGCAGTAAGCCTTTGGACGACGTTGCAGCTTATAAAGCCCATCTGAGTGAGCACAACAATGAGAGCCAGCTTCCCATGCAATGCATCTGCTGTCGACAGTCGTTGCATTCGGATTTCGAGATCACCTTGCATGCCCAatttcatACCAAATCTTCGAACAGTCCCGAAAGCGTTTGTGCACTCTGCTTAGAACCTATCCCAAATTCCAACAATGGCGACGCTAAAGTTTGCGAAAAATGTTGCCGGAAACACAAACTGGGTGGTAAATTCAATACCCACCGCctacgaaatgaaatttttgaacatgTTCCAGAAGTGCGACGTAATACATTGCCAACTGAAAGTCGATGTAATATCTGCAAACTGATGTTACCACATGCCCAAAAACTGCAGGAGCATTTGGTGGAGCATACCTTTGCTGGGTGTGAAGAACGAGGTTTCAACTGCTACATATGCTCTGCCGTTTTCACTACACCAAGCAGCTTACTGACTCACATGCATGAGCACGGGCCTCAGTGCCGCCCTTACGACTGTAATTTATGTAGTGACAAGTACTTTTTCCGTGCTGAACTCGAGCACCACTTACTGGCTCATGAGTCACAGACTACTTGTGAGttgaaagacaaagaaaaagatAAGGAAAAGTTTACTTCATTTCCGAATGCAACCGAAAACTCAGTGCCCTATCCAGAagttaagaaagaaatattgttaaatGATGATAAAATCCCAACTGGCGAAGAAGATGAGTAcatcgaaattgaaaatgttaatgatGTTCATCATGCTTATAATTCAACACAGCAAAGTTATGGCACTCCTGAAGAAATCCTACAAAAAGAAGATAGGAAACATCAAAGCAACTAA
Protein Sequence: MRVVMAVKMLYRGPSSKLENLIEKIQATKEIGTTDMYSTHTSSNYSPSVSDGTLTPNSLQHQEHHSHSQSMQYFPQQNTDGDTSRRVNQRKGLYTTKDEGTEENEVGGNGDVKSSENNSADTLNAAQLENNANADTQHKRQARLHRQHLYHHGDYHSSKIITKLRKIERVATKFDKLTGDGIKGNTVDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSSGSVSSSGSFHKRRYAAALIHTENKSNRLEHPKRPRTVNLLTCNYCSKTEFNSIDQLDIHIQTKHEKEIFSTQKIQQQTTPNSTFSDQSSFQLRCEYCTMQFGNLPALFQHIRISHVDRLASPNSYFEHFNRLAASGTFSPRLVTDKTALKEGNIAKRNNIKQEQIVPSVNAKDEKQEEEPTDLSQNKRRSPTPVSTTEESFQPDIFFCNQCNAGLPDFEKFRSHLKTHITQGLNLICHHCGLALQEPSEHERHVISHYLISNSEYACEYSKCDKSFSKADELQSHMLDQHTISMFKCSVCSELFESKMAIQMHFACTHSVETKSFRCSACMEIFRSESEFNNHVKSHHPGLNGPVPNSLQCMFCRTVCSNELEMHFHLAAHARQFQCPSCPETFHVEFLLDRHMQSHHSGNTRPVLSSKGTFEDASTPSNVPNQINSLYMNALLSKTPQMPISSQNNNTSILDYNIAFAAHLNKSLFPGPTAVAPLADGKFYNALQVDTSTVKHPGLMYGLSQRYFDTSRTLIEMYTQQRMEKPTTVENYYNSPKPQPIAQHLKLKPDLHQNRSPAESIIPTSVASSSSMCYSCDICERNDFRSEGEVNSHRKIVHNMKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSKPLDDVAAYKAHLSEHNNESQLPMQCICCRQSLHSDFEITLHAQFHTKSSNSPESVCALCLEPIPNSNNGDAKVCEKCCRKHKLGGKFNTHRLRNEIFEHVPEVRRNTLPTESRCNICKLMLPHAQKLQEHLVEHTFAGCEERGFNCYICSAVFTTPSSLLTHMHEHGPQCRPYDCNLCSDKYFFRAELEHHLLAHESQTTCELKDKEKDKEKFTSFPNATENSVPYPEVKKEILLNDDKIPTGEEDEYIEIENVNDVHHAYNSTQQSYGTPEEILQKEDRKHQSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045677;
90% Identity: iTF_01045677;
80% Identity: -