Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: RREB1
Assembly: GCA_030068015.2
Location: CM061525.1:13054063-13061280[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.019 1.3 9.8 2.1 1 21 320 340 320 342 0.95

2 15 0.0004 0.028 15.1 0.1 1 23 352 374 352 374 0.98

3 15 3.1e-05 0.0022 18.6 7.5 1 23 380 402 380 402 0.98

4 15 1.9 1.3e+02 3.5 0.0 2 23 718 741 717 741 0.93

5 15 0.57 39 5.2 2.3 2 19 747 764 747 764 0.96

6 15 0.028 2 9.3 0.1 3 21 781 799 780 800 0.94

7 15 0.032 2.2 9.1 0.1 1 23 970 992 970 992 0.97

8 15 2.6e-05 0.0018 18.9 1.2 1 23 1002 1024 1002 1024 0.99

9 15 0.00083 0.057 14.1 2.2 1 23 1030 1053 1030 1053 0.97

10 15 0.004 0.28 12.0 2.0 1 23 1369 1392 1369 1392 0.95

11 15 0.00012 0.008 16.8 0.3 2 23 1751 1772 1750 1772 0.97

12 15 0.2 13 6.7 6.3 1 23 1778 1801 1778 1801 0.97

13 15 1.3 93 4.0 4.9 1 23 1922 1945 1922 1945 0.97

14 15 0.011 0.78 10.6 0.5 3 23 2000 2020 1998 2020 0.96

15 15 0.0018 0.12 13.1 4.8 1 23 2026 2048 2026 2048 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.019	1.3	9.8	2.1	1	21	320	340	320	342	0.95
2	15	0.0004	0.028	15.1	0.1	1	23	352	374	352	374	0.98
3	15	3.1e-05	0.0022	18.6	7.5	1	23	380	402	380	402	0.98
4	15	1.9	1.3e+02	3.5	0.0	2	23	718	741	717	741	0.93
5	15	0.57	39	5.2	2.3	2	19	747	764	747	764	0.96
6	15	0.028	2	9.3	0.1	3	21	781	799	780	800	0.94
7	15	0.032	2.2	9.1	0.1	1	23	970	992	970	992	0.97
8	15	2.6e-05	0.0018	18.9	1.2	1	23	1002	1024	1002	1024	0.99
9	15	0.00083	0.057	14.1	2.2	1	23	1030	1053	1030	1053	0.97
10	15	0.004	0.28	12.0	2.0	1	23	1369	1392	1369	1392	0.95
11	15	0.00012	0.008	16.8	0.3	2	23	1751	1772	1750	1772	0.97
12	15	0.2	13	6.7	6.3	1	23	1778	1801	1778	1801	0.97
13	15	1.3	93	4.0	4.9	1	23	1922	1945	1922	1945	0.97
14	15	0.011	0.78	10.6	0.5	3	23	2000	2020	1998	2020	0.96
15	15	0.0018	0.12	13.1	4.8	1	23	2026	2048	2026	2048	0.99

Sequence Information

Coding Sequence: ATGCTCGCCACAGCAGCCGCCAGCACACAACAGCAATTGGATGCCATGCAAACAACGAACGTCACAAAGATGGAACGACGTGACTCAACCACATCCGAATCATCATTGGAACATTTGGATTTGGGACGTACACCAAAGAAGCTAAGCTCACATTCATCGGCTACATCGACGCCGATGCATGCGGCCGCCACAACCATCAtcactaccaacaacaacaccaacaacaacaactatggtGGTAGtaatagtaacaacaataacaacaacaacaacaacaacacaaacagaaCTAGCAACAATGAATTGTTGAATGCAAAAGATGCTAACAACACATCCCAACCAACCGCGCACCATCAACGTCACAGCAATGACTCGGATGAGGCTAACGACTATGACGACGACGATGAGGAGTCGCCAGATGAACAATGTAGCAGTAAACAGAATGCACACAGCGCGCGCTCACTACGTCATCATAAACGTCGCAGCACCGGCGCAATACGTCTAGACAAACGTACCAGCGTTCATTTGGAATTCAATGCGGATGATCCGAATTCGCTGCGTAAGAAATTTCGTTTCAATCGCAGCGCATCCGCCTCCGAACAAATTAGTCAAAGTAATAATAATGAGTCTGGTTTTGTGGACGCCAGTTGTAGTAGCCATTATCTGAATGCATCGACTGTGTCATTAGCGGCggcggcagcggcagcagcagggACTGTGACAACGGCCACGTCAGCGACGACATCGCCACTTAGTGTGCCCGCTGCTCCTGTGGGTTTGAATGGGACGCCACCGCATAATTCTGTCTCGGCGTCAGCTTCGGCTACGGGATCGCACAGTTCATCGTCAGCTGCTTCCTCGCCACGTGGTTGTGGCGCGGGTTTGGCTATCGGTTCATCCGCCTCGGTATCAAGTCCCGAATCAGGTATTGGTGATAGAGATCGTGAGGATATGAAATTTGTGTGTACCATTTGTGATGTGGTGTCGGCCACGCGACACGAATTCACAAATCACATACGTTGCCACAATTACGCCTCGGGTGATACGGAGAATTACACCTGTGCTATTTGCTCGAAGGTGCTCTCTTCGGCCTCCTCACTGGATCGGCATGTGCTGGTGCACACAGGCGAACGACCATTCAATTGCAAATATTGTCATCTCACCTTCACCACTAACGGTAATATGCATCGGCACATGCGTACGCACAAACAGCATCAGCATAATCATCATCATCGCCGCAACTCGAATGGAACAAAACAGCATGCCAGTCATAGTCATAAcaccagcaataacaacaacaacaacaacaaccacaccaACCATTCAGCGTCTGGCACATTTACTACGAGCACAGCCGGAACAAACTGTTCCGTTTCAGCCACAGCCACAGGCACAGCCAACACTTACGCGCAATTAAGCCACCAGCACCAACACGGCGGCTTGCATGGCGTAGGtgtaaaatcaacaacaacaacaacaacaacatcagccgAAATAATGACACTGCCAGATGCTGGTATGAGCCACACAATTGGTGCCGGCAcaggtggtgttgttgttgttggcccaTGCCAGGTTGCAGGTGTTAATGGGAAACGCTTACACAGTAGCGGCGTAGAAAGTTGCGAAAGTGACGGTGGTTGCTCAACAGATTCCTCATCAAGTGCCATCAGCCATAGCTCAAATAATCATCTCAATCACagtagtaataataacaataacaataataataatactaataataataacgacaacaacaacaagaatatgaataataacagcaatgacaacaacaacataatgaGCAATAATGCACAGACAAATAATTATAGCAACAATATTAACGCGAAACGCCATAGTTTGGGTAATTTTAAGCGTAAAAGCAGTGAACAGCCAGACGCCGCAGACGCTGACGACCTGACAATGATGACAGCGATGAAGCGACGCGTGAAGACcacaataaacaacaatacaATGATGATAATCGGCGAGGATATGGATGAGGTTGATGCAAGAACCGCCCTAGTGACGCACAATACCAGGGAGAGCGCAATAGCGGAGTTAAAAACTAATGCCTCCTCATCCGCATCCGAGGATGCCGGTATGACCGTTGATGATTTGGATGAACAAAAGCCCTACATCGCCTGCCTCGTCTGTCCGGTGTGTAATGTTGAGGACTTTGCTGACTCGCACGCACTAGATGTCCATTTGGATAGTCAACACGCCGATATACCAGCCAAGTGTCGTCATTGTGAGGTGGTATTTCGCACACATCGCCAACTGAGCTTACATCCATGCACCCAGCGCTTGATAGGCCAACGTCCAATGCCCATTGTGGCGTGCGGTAAGTGTGGGCGGAGCTTCGAGAGTTTCAACGCTTTGGAGTTGCATGCACGTGAATGCGTTAAAAGTGTGGAGCGTCCCGCACGGCGTAGTCGTAGCTTGAGCGATAGCTTCACTAGCCTGCCCTCAACGGAAGTCGAGCTGGAAGAGAAGACGAGCCAGTTGCGCAATAACTTTTTCCGCCAATTGTACTTACAAAGCCAGAAGCCTTTTTGTGCGCAGAGTTTGATCTCGCTACCCTCGCCGCAACACTCCGTGCACGTCGAGGATGTGGATGGGGATGCAGCAAATGTAAGCAATACCGATATCAAACTTGAAACTGATAATGAGCCAACAGATCAATTGAGTAACAATTTTCTCACACAACAGTCGCAAGAGTCAAAGGATTTGGCTGATATACAGTCGATTCTTAATATGACTTCGTCTTCATCGACTTCGAATTTCttaaagaattttgaacaaTCCGTGAATACGCCATCCAGTAATTACAGTTTGGATAAAGACGAGGAGGAGGCACAAGATGCTTTCACATCTGAGTTCCGTAAAATGAAATTGCGTGGCGAATTCCCTTGCAAGCTCTGCACGGCCATCTTTCCCAACTTACGTGCACTGAAAGGTCACAATCGTGTGCACTTGAGCTCCGTTGGACCGGCTGGCCCATTCCGCTGTAATATGTGTCCATACTCGATATGCGATAAGGCTGCGTTGGTGCGTCACATGCGCACACACAATGGCGATCGGCCTTACGAATGTGCTGAGTGTAATTACGCATTCACCACGAAGGCCAACTGCGAACGACATTTGCGCAATCGTCATGCGAAGACTACACGCGATGAGGTAAAACGCGCCATAATTTATCATCCATCGGAAGACTCAACATGTGATGATCCCAACAAGAAATTACACATGTTCTCCTCTCCGGATTTCGATGATGATATGGATTTGCAGTATCAACAACATCAGCCCAAAGATCGCTCCACACCCGTCTCACACCTCAAGGAGATGCTTAGTGCTGAAAGCCCTGCCACTAAACCAATGAAGATACAAGTTAAAAGTTTAGAGCAGTTGCTTGACAAGTCTACGGGCTCCGTTGGCAGCTATAATGAACCATATGAAGCAAGCACACCAGCGCCGCCCAACATCCAACACACCGAACCCGCGCCCATAGATCTGAGCATGGATGTCTTAGATTTAAGCAAAAAGCCCACGCCAAAGCCAGTTGAGAAGGAGATTGCGCCACCTTCCGTGCCAACGCCAGTTGAAACTGGCATTGATCCGGAGAAGAAACTGGACTTTTTCTCTCTAGTAAAGGAAAACTTGAACATGCCAAAAATGCTCGAGCTCTGGAGCTTGTCCACACAATTTCCATTCATACCCGATTTTGGTCCACTCATGAATCAAATGTTCGCTGGtaacgctgctgctgctgcaggtAACCCCTTTATGCCACCCGGTATTGACCTAAATAAAGCAAGCATGTCCGCAACAGCAAATATGACATCATCCATGTTGCCGCATATGAACTCACTCATGATCGACAAGCTAAACACTCATCCACATGCCACACCAGATCCCAATGTAATGAATCAAATGTTGCCCTCACCGTTAATGACGCCACCTCCGACCAACTCGGGCATGAGTATGTTGCGTCATTCGCAAATTTCACCCACTGTACTGCCGGGTGGACCCGTGAAAATGGTCATCAAGAATGGCGTACTAATGCCCAAACAGAAGCAACGCCGTTACCGCACCGAGCGTCCCTTCGCTTGTGAACATTGCTCGGCACGTTTTACGTTGCGCTCGAACATGGAACGTCACGTGAAGCAACAACATCCACAGTACTATGCACAACGTCACCGCAGTGGGCATCATAGCATGCGCGGACGTGGCGCTAGTAACGCTTCAACAATTAACAGCATTTCGCATCTCCAAGCAGCAATAGCGCAAGCACACAACACTGTCAATCAAGCACAAGGCAATGGTTTGACTGCTTCACCCATTTCAGACCATGTAAAGTACGCTATATTGGCACAACAGCTGAAAGCACGCAAAGACACCGACTTGCTGCAGCAAGCACTTGCTCACGGTTCCAGCAGCATTGCGGGTAACCATCATATGTTGTTGAATGCAGCCGGTGCGGCACTTGGACCACTTGCGCCACCCAACGGTCTGCAATTCCCCTTTAACCAACTAACACCGCCCACAAACATCAACGGCTCCATCGAAGATGATGAACCCAAATTGGTTATTGATGAGGATgacgaagatgatgatgatgtcgaAGAGATACTCGATGACAACGAGGAGGAGGAAGAGCAGCATTTGGCAAATGAACATTTTGAAAGTATGCGTAAGCTCCAAACACCAATGCCTGTGGTGGAGGAGCTGAAGACTGCTGCACCAACCACCAGTGAGTCCGGCAATGAGACTGCGAAAAAAGTTGCAGAAACAATTCTAGAGCAGGCCATCAAAACTGGTCAAAAACTCAATCAGGCCACTAATCAGGAACCAAGCACAACATTTGCAGCGAAACCTGCGCCAGCCAAGCCTGTAGCAGTCGCAACATCAGCTGCACCTACCGCACCGGCAGGTACTATGAAAGCTATGATCGCACAAGCCGAGTCGGTGGGCAAGTTTCTGAAAGAGGTGGCAAGCTCGCCATTCAAAGACGAAACTCACGACTTGGTGCCTGTTGCCAAACTTGTAGACAATGCCACCAGCAATGCCGTCTCATTCACCAACTATTTCCGCCCCAGCGATGTTGCCAATCATATGGAGCAGAGCGACGAAGAGGGTTTAGTGGCGTCTGGCAGTGCCAGCGAAAGCAATCACTCCGGCACCGAAGACGTAGCCGCGCCAGCTGAGCCGAAAAAGAAATCAGCTTACAGTTTGGCGCCAAATCGTGTTTCGTGCCCCTACTGCCAACGCATGTTCCCTTGGTCCAGCTCACTGCGGCgacacatactcacacacaccGGTCAGAAACCATTCAAGTGTTCACACTGTCCGCTGCTCTTCACCACGAAAAGCAATTGCGATCGTCACCTACTACGTAAACACGGTGACGTCGAATCCGCGGTGTCGGTATACGTGCCAACGGAAGATGTCAACGAGCCGATACCGGTGCCAAAATCAGTGGAAGAGATCGAGCAACAACAGCGTCAACGTGAAGAGGAGGAGCGCAAGCGCAAGGCCGAAGAGCAACAAGCAGAGCGTGAGCAACGCGATAAAGAGCAACGCATGCAACAggaaaaagaacaacaaaacaaactGTTTAAACAACTAGCTGTCGCACAACTGCAACAGCAGCTCAATGCCTCCATGAGCGCCGCCGCCAATGCCTCTATGAATGCAGCCGCGAGCGCCGAAGCCGAAGCACGCGCCAAAGAGCACCTCTCACAGCTCAACGCCGATTTGCCATACAAGTGTCATCTGTGCGAAAGCTCCTTTGCCGAACGCTACAACTGCCTGGAACATATCAAGAAGCAGCATGCACCAGAGTTTACACTACTCTTGAGCAAAGGCGCTATCGTCAGCGAGGCCGAGGCAAATCAAACTCAGCTCATCGAAGATGAAGAGCGACGTGTGGGCGAAGAGGCGCACAACTTTGCATTGCTGCCCAAATTGCCGGCCTATACCAATCGAAAAGTGATTTGCGCCTTCTGTGTGCGTCGCTTCTGGTCGACGGAGGATTTGCGTCGCCACATGCGCACGCATTCCGGCGAACGGCCATTTCAATGCGAAATCTGTTTGCGTAAATTCACACTGAAGCACAGCATGTTGAGACATatgaaaaaacacataaatcaTGGACAAAATGGTGGCGCTGGTGGAGATGGTGCCGCCGGTTTAGGTAATAGTGGCTCAGATTTCTCGGATGATGAACAAATGCCTACACCAACAACTATATCGACGGAAAACATGTCTACCGCAGCCGTTACGTCTACAacgtctacaacaacaacgacagcggCATTCACACTGCGTACGCCGAAAATACAGGAGCTGCTGAACAAGACGAACGAATGGCGCAGTGCACACTTGGCCGgcgaacaaaaggagaatattGCCGAAGAACAACCGAATGGGCTGCACAGTGATCTGATTGGTAATCTCTTAGGTATAAGCGATCAGGGTATACTCAATAAATTACTCTCGTCGGCGGATGAGGCGGCCAAGCTGTTGGGCGTGGAGAAgtaa
Protein Sequence: MLATAAASTQQQLDAMQTTNVTKMERRDSTTSESSLEHLDLGRTPKKLSSHSSATSTPMHAAATTIITTNNNTNNNNYGGSNSNNNNNNNNNNTNRTSNNELLNAKDANNTSQPTAHHQRHSNDSDEANDYDDDDEESPDEQCSSKQNAHSARSLRHHKRRSTGAIRLDKRTSVHLEFNADDPNSLRKKFRFNRSASASEQISQSNNNESGFVDASCSSHYLNASTVSLAAAAAAAAGTVTTATSATTSPLSVPAAPVGLNGTPPHNSVSASASATGSHSSSSAASSPRGCGAGLAIGSSASVSSPESGIGDRDREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKQHASHSHNTSNNNNNNNNHTNHSASGTFTTSTAGTNCSVSATATGTANTYAQLSHQHQHGGLHGVGVKSTTTTTTTSAEIMTLPDAGMSHTIGAGTGGVVVVGPCQVAGVNGKRLHSSGVESCESDGGCSTDSSSSAISHSSNNHLNHSSNNNNNNNNNTNNNNDNNNKNMNNNSNDNNNIMSNNAQTNNYSNNINAKRHSLGNFKRKSSEQPDAADADDLTMMTAMKRRVKTTINNNTMMIIGEDMDEVDARTALVTHNTRESAIAELKTNASSSASEDAGMTVDDLDEQKPYIACLVCPVCNVEDFADSHALDVHLDSQHADIPAKCRHCEVVFRTHRQLSLHPCTQRLIGQRPMPIVACGKCGRSFESFNALELHARECVKSVERPARRSRSLSDSFTSLPSTEVELEEKTSQLRNNFFRQLYLQSQKPFCAQSLISLPSPQHSVHVEDVDGDAANVSNTDIKLETDNEPTDQLSNNFLTQQSQESKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAIFPNLRALKGHNRVHLSSVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSTCDDPNKKLHMFSSPDFDDDMDLQYQQHQPKDRSTPVSHLKEMLSAESPATKPMKIQVKSLEQLLDKSTGSVGSYNEPYEASTPAPPNIQHTEPAPIDLSMDVLDLSKKPTPKPVEKEIAPPSVPTPVETGIDPEKKLDFFSLVKENLNMPKMLELWSLSTQFPFIPDFGPLMNQMFAGNAAAAAGNPFMPPGIDLNKASMSATANMTSSMLPHMNSLMIDKLNTHPHATPDPNVMNQMLPSPLMTPPPTNSGMSMLRHSQISPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHSMRGRGASNASTINSISHLQAAIAQAHNTVNQAQGNGLTASPISDHVKYAILAQQLKARKDTDLLQQALAHGSSSIAGNHHMLLNAAGAALGPLAPPNGLQFPFNQLTPPTNINGSIEDDEPKLVIDEDDEDDDDVEEILDDNEEEEEQHLANEHFESMRKLQTPMPVVEELKTAAPTTSESGNETAKKVAETILEQAIKTGQKLNQATNQEPSTTFAAKPAPAKPVAVATSAAPTAPAGTMKAMIAQAESVGKFLKEVASSPFKDETHDLVPVAKLVDNATSNAVSFTNYFRPSDVANHMEQSDEEGLVASGSASESNHSGTEDVAAPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEERKRKAEEQQAEREQRDKEQRMQQEKEQQNKLFKQLAVAQLQQQLNASMSAAANASMNAAASAEAEARAKEHLSQLNADLPYKCHLCESSFAERYNCLEHIKKQHAPEFTLLLSKGAIVSEAEANQTQLIEDEERRVGEEAHNFALLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHINHGQNGGAGGDGAAGLGNSGSDFSDDEQMPTPTTISTENMSTAAVTSTTSTTTTTAAFTLRTPKIQELLNKTNEWRSAHLAGEQKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00303978;
90% Identity: -
80% Identity: -