Basic Information

Insect: Ceratitis capitata
Gene Symbol: RREB1
Assembly: GCA_000347755.4
Location: NW:2097755-2114181[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.015 0.76 9.8 2.1 1 21 310 330 310 332 0.95

2 15 0.00031 0.016 15.1 0.1 1 23 342 364 342 364 0.98

3 15 2.4e-05 0.0012 18.6 7.5 1 23 370 392 370 392 0.98

4 15 0.96 49 4.2 0.1 2 23 692 715 691 715 0.92

5 15 0.6 30 4.8 1.1 2 19 721 738 721 738 0.96

6 15 0.007 0.36 10.9 0.0 2 21 754 773 753 774 0.93

7 15 0.0087 0.44 10.6 0.1 1 23 944 966 944 966 0.97

8 15 2e-05 0.001 18.9 1.2 1 23 976 998 976 998 0.99

9 15 0.00064 0.032 14.2 2.2 1 23 1004 1027 1004 1027 0.97

10 15 0.0031 0.16 12.0 2.0 1 23 1342 1365 1342 1365 0.95

11 15 8.9e-05 0.0045 16.8 0.3 2 23 1725 1746 1724 1746 0.97

12 15 0.15 7.6 6.7 6.3 1 23 1752 1775 1752 1775 0.97

13 15 0.7 36 4.6 5.0 1 23 1897 1920 1897 1920 0.97

14 15 0.0087 0.44 10.6 0.5 3 23 1975 1995 1973 1995 0.96

15 15 0.0014 0.07 13.1 4.8 1 23 2001 2023 2001 2023 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.015	0.76	9.8	2.1	1	21	310	330	310	332	0.95
2	15	0.00031	0.016	15.1	0.1	1	23	342	364	342	364	0.98
3	15	2.4e-05	0.0012	18.6	7.5	1	23	370	392	370	392	0.98
4	15	0.96	49	4.2	0.1	2	23	692	715	691	715	0.92
5	15	0.6	30	4.8	1.1	2	19	721	738	721	738	0.96
6	15	0.007	0.36	10.9	0.0	2	21	754	773	753	774	0.93
7	15	0.0087	0.44	10.6	0.1	1	23	944	966	944	966	0.97
8	15	2e-05	0.001	18.9	1.2	1	23	976	998	976	998	0.99
9	15	0.00064	0.032	14.2	2.2	1	23	1004	1027	1004	1027	0.97
10	15	0.0031	0.16	12.0	2.0	1	23	1342	1365	1342	1365	0.95
11	15	8.9e-05	0.0045	16.8	0.3	2	23	1725	1746	1724	1746	0.97
12	15	0.15	7.6	6.7	6.3	1	23	1752	1775	1752	1775	0.97
13	15	0.7	36	4.6	5.0	1	23	1897	1920	1897	1920	0.97
14	15	0.0087	0.44	10.6	0.5	3	23	1975	1995	1973	1995	0.96
15	15	0.0014	0.07	13.1	4.8	1	23	2001	2023	2001	2023	0.99

Sequence Information

Coding Sequence: atgatCGCCACAGCAGCCGccaacacacaacaacaactggaTGCCATGCAAACAACGAACGTCACAAAGATGGAGAGACGTGACTCAACCACATCCGAATCATCACTGGAACATTTGGATTTGGGACGTACACCAAAGAAGCTAAGCTCACACTCATCGGCCACATCGACGCCGATGCATACGGCCGCCACAACCAccacaacaagcaacaacaataatagtgtTAGCAATATTAAcaagaacaaacaaacaaacagaaatatcAACAAtgaattattgaatataaaagAAGCCAACAACACAACCACAACTGCGCACCATCAACGTCACAGCAATGACTCGGATGAGGCTAACGACtacgatgacgatgatgaggAGTCGCCGGATGAACAGTGTGGCAGTAAACAGAATGCACACAGCGCGAGATCACAACGTCATCACAAACGTCGCAGCACCGGCGCACGTCTAGACAAACGTACCAGCGTACATTTGGAATTCAATGCGGATGATCCGGATTCGCTGCGTAAGAAATTCCGTTTTAATCGCAGCACCTCCGCCTCCGAACAAATTAGCCAAAATAATAATGAGTCTGGTTTTGTGGACGCCAGCTGTAGTAGTCATTATCTGAATGCGTCGGCTGTATCATtagcagcggcggcggcagcagcagcagcggctgtCCCGTCGGCCATGTCTACAACAACATCACCACATAGTGTACCTGTTGCTGTGGGTTTGAATGTGACGTCGCCGCATAATTCAATGTCTGCATCGGCGTCAGCTTCGGCCTCGGCGACGGGCTCACACAGTTCATCGTCGGCTGCTTCATCGCCTCGTGGTTGTGGCACGGGTTTGGCTATCGGTTCATCCGCCTCGGTATCAAGTCCCGAATCGGGTATCGGTGATAGAGATCGTGAGGAtatgaaatttgtatgtacCATTTGCGACGTGGTGTCGGCCACACGACATGAATTCACAAATCATATACGTTGCCACAACTATGCCTCGGGTGATACGGAAAACTACACCTGTGCTATTTGCTCGAAGGTACTCTCTTCAGCCTCCTCATTGGATCGGCATGTGCTGGTGCACACCGGCGAACGACCCTTCAATTGCAAATATTGTCACCTCACCTTCACCACCAACGGTAATATGCATCGGCACATGCGTACGCACAAACAGCATCAGcataatcatcatcatcgtcgtaaCTCGAATGGAACAAAACAGCATACCAGTCATAGTCATAACACCAGCGCCAACAACAACTCAGCGTCGGGTACTCGTAATACGAGCACAGCCGGAACAAACGGCTCTGTCtcagccacagccacagccgcCACTTACGCGCAATTAAGCCACCAACACGATTTGCATGGGGAAGGTGCAAAatcaacaacgacaacaacaacaacaacagcatcagtCGACGTAAATGCGGTGACAGATGCTGGTATGAGCCACGCAACTGGCGCAGTCattggtggtgttgttggtggGCCAGCCGTTGTAGGTGTTAATGGCAAACGCTTACACAGTAGCGGCGTGGAAAGTTGCGAAAGTGACGGTGGTTGCTCAACAGATTCCTCATCAAGTGCCATCAGCCATAGCTCAAATAATAATCtcaatcataataataataacaataacaacaataataatagcgacaacaacaacaagaatatgattaataacatcaacaacaacaacataatgaGCAATAatgcacaaacaacaaataattacagCACCAACATCAACGCAAAACGCCATAGTTTGGGTAATTTTAAGCGCAAGAGCAGTGATCAACCTGACGCCACAGACGCCGACGACCTGACAATGATGACAGCGATCAAGCGACGCGTGAAGACTACcataaacaacaatacaatGATAATCGGGGAGGATGTGGACGAGGTTGGTGCACGACCCGCCCTGATGGCACACAATGCGATCGAGAGCGCATTGGGAATGGTTAAAACCAATGCTTCTTCTGCATCGGAGGATGCCGGTACGACTGGTGATGATTTGGATGATAATGGCGTCGAGCAAAAGCCTTACATCGCCTGCCTTGTCTGCCCGGTGTGTAATACTGAGGACTTTGCAGACTCGCACGCGTTGGATGCCCATTTGGACAGTCAACACGCGGATATACCAGCCAAGTGTCGACAGTGTGAGGTCGTATTCCGCACACATCGCCAATTAAGCTTGCATCCATGCACGCAGCGTCTGCTGGGGCAACGTCCAATGCCCGTGGTGGAGTGTTTCAAGTGCGGTCGGAGTTTCGAGAGTGACAGCGCTTTGGAGTTGCATGCACGCGAATGCGTTACAAGTGTGGAGCGTCCCGTGCGGCGTAGCCGTAGCTTAAGCGATAGCTTTGCTACCGCGCCATTAACGGAGGCCGAGTTGGAGCATAAGACGAGTCAGTTGCGCAATAACTTTTTTCGTCAATTGTATTTACAAAGCCAGAAGCCTTTCTGTGCACAAAGCTTGATCTCATTACCCTCGCCGCAACACTCTATGCATGAGGAGGATGTGGATGTAGATACAGCAAATGTAAGCAATACCGACATCAAACTTGAAGCTGATAATGAGCCAACAGACCAATTGAGTAGCAATTTGCTCTCACAACAATCGCACGACTCAAAGGACCTGGCTGACATACAGTCGATTCTTAATATGACTTCGTCTTCGTCGACTTCGAATTTCTTGAAGAATTTTGAACAATCCGTGAATACGCCATCTAGTAATTACAGCTTGGATAAAGACGAGGAGGAGGCACAGGATGCTTTCACATCAGAGTTTCGCAAAATGAAGTTGCGCGGCGAATTTCCTTGCAAACTTTGCACGGCCGTTTTCCCCAATTTACGCGCACTGAAAGGCCACAATCGTGTACACCTGAGCTCCGTCGGCCCGGCAGGTCCATTCCGTTGTAATATGTGCCCATACTCTATATGCGATAAAGCTGCGTTGGTACGTCACATGCGCACACACAATGGCGATCGGCCTTATGAATGTGCTGAGTGCAACTACGCATTCACCACCAAGGCCAACTGCGAACGACATTTGCGCAATCGTCATGCAAAGACCACACGTGATGAGGTGAAACGATCCATCATTTATCACCCTTCGGAAGACTCGACATGTGATGACCCTGCCAAAAAGATGCACATGTTCTCCTCACCGGATTTCGATGATGAGATGGACTTGCAGTATCAACAACATCAGCCCAAAGACCGCTCTACACCCGTCTCGCATCTCAAGGAGATGCTCACTTCTGAAAGCCCAGCCACTAAACCAATGAAGATACAAGTTAAAAGTTTAGAACAGTTGCTTGATAAATCTACCGGCTCCGTTGGCAGCTATGGTGAATCATATGATGAACGCACACCAGCGCCGCCCAACATGCAGCATGCAGAAGTAGCGCCCATCGATCTAAGCATGGATGTCTTAGATTTGAGCAAGAAACCCACAGCAAAGTCAGTTGAGAAAGAGATTGCACCGCCGGTCGTACCAACAACTGCGGAAAATGTGGTTGATCCCGAGAAGAAACTGGACTTTTTCTCTTTGGTAAAAGAAAACTTGAACATGCCGAAAATGCTTGAGCTGTGGAGCTTGTCAACACAATTACCCTTCATACCCGATTTTGGCCCTCTAATGAATCAGATGTTCGCTGGCAACGCTGCTGCAGCAGGTAACCCCTTTATGCCACCCGGTTTTGACCTGAATAAAGGAAACATGTCCGCATCAGCAAATATGACACCGCCCATGTTGCCACATATGAACTCACTAATGATCGACAAGCTAAACACGCATCCACATGCCACACCAGATCCCAATATAATGAATCAAATGCTACCATCGCCGCTAATGACGCCACCGCCACCCAACTCGGGCATGAGTATGTCGCGTCATTCGCAAATTCCACCCACCGTACTGCCGGGTGGGCCTGTGAAAATGGTCATAAAGAACGGCGTACTAATGCCCAAACAGAAGCAACGCCGTTACCGCACCGAGCGTCCCTTCGCCTGTGAACATTGCTCGGCACGTTTTACACTCCGCTCGAATATGGAGCGTCACGTCAAGCAACAGCATCCACAGTATTACGCACAACGTCATCGCAGCGGCCATCACAGCATGCGTGGACGTGGCGCTAGTAACGCTTCGACAATTAACAGCATTACGCATCTTCAAGCGGCAATAGCGCAAGCTCACAACACCGTCAATCAAGCACAAGGCAATGGTCTGGGCGCTTCACCCATTTCAGACCAGGTAAAATACGCTATTTTGGCGCAGCAGCTGAAGGCACGTAAGGATACCGACTTGCTGCAGCAGGCACTCGCTCACGGCTCCAGCAGCATTGCGAATAACCATCACATGCTGCTGAATGCTGCCGGTGCGGCACTTGGACCACTTGCCCCACCCAACGGCCTACAATTCTCCTTCAACCCATTGACGCAGCCTACAAACGTCAATGGCTCCATTGAAGATGATGAACCTAAATTGGTGATTGACGaggatgacgatgatgatgatgatgtcgaAGAGATAGTCGATGACAAcgaagaggaggaggaagagcAGCAGTTGGCAAATgagcattttgaaaatatgcgcAAATTCCAAACACCAATGCCAGTGGCGGAGGAGGTGAAGACAGCAGCGGCAGCTACTACTGAACCCGGCAATGAGACCGCTAAGAAAGTAGCAGAAACAATTCTAGAGCAGGCTATTAAAACTGGGCAAAAACTGAATCAAGCCGCTAGTAAACAGCCCAGCTCAACATTTGTAGCGAAACCTGCGCCAGTCAAACCTGTCACAGCGCCAACACCAACTGCACCTGCCGCACCGGCCAATACAATGAAAGCCATGATCGCGCAAGCCGAGTCTGTGGGCAAGTTTCTGAAAGAGGTGGCAAGCTCACCCTTCAAAGACGAGTCTCAAGACTTGGTGCCTGTTGCCAAACTTGTCGACAATGCGACCAACAATACCGTCTCATTCAACAACTATTTCCGCCCCAGCGATGTCGCCAATCATATGGAACAGAGCGACGAAGAGGGTTTGGTAGCGTCTGGCAGTGCCAGCGAAAGCAATCATTCCGGCACCGAAGACGTAGCCGCGCCAGCCGAACCGAAAAAGAAATCAGCTTACAGTTTGGCGCCGAATCGTGTGTCGTGCCCCTACTGCCAACGCATGTTCCCTTGGTCCAGCTCACTGCGACGTCACATACTAACGCACACCGGCCAGAAGCCATTCAAGTGTTCGCACTGTCCGCTGCTCTTCACCACGAAAAGCAATTGCGATCGGCACTTGCTACGCAAACACGGCGATGTGGAATCCGCTGTGTCGGTATACGTGCCAACAGAAGATGTCAACGAGCCGATACCGGTGCCAAAATCTGTCGAAGAGATCGAGCAACAACAGCGGCAACGCGAAGAGGAAGTGCGCAAACGTAAAGCCGATGAACAACAAGCGGAACGAGAGCGCCGTGAGAAGGAGCAACGCATGCAGCTggaaaaagaacaacaaaacaaactctTCAAGCAATTAGCTGTcgcacaactacaacaacaactcaacgcCGCTTCAATGAGCGCCACGGCCAATACCCCAATGAATGTAGCCACAAACGCCGAAGCCGATGCACGCGCCAAAGAGAATCTCTCACAGCTCAACGCCGATTTGCCATACAAGTGTCATCTGTGCGAAAACTCCTTCGCCGAACGCTACAACTGTCTGGAACACATCAAGAAACAGCATGCCCCAGAGTTCACGCTGCTCTTGAGCAAAGGCGCAATCGTCAGCGAGGCCGAGGCAAACCAAACACAATTCATCGAAGATGAGGAGCGACGTGCGGGCGAAGAGGCAAACAACTTTGCATTACTGCCCAAATTGCCGGCCTACACCAATCGCAAAGTCATTTGCGCCTTCTGTGTGCGTCGCTTCTGGTCAACGGAGGATTTACGACGTCACATGCGTACACATTCCGGCGAACGGCCATTTCAATGCGAAATCTGTTTGCGTAAATTTACACTGAAACACAGTATGTTAAGACACATGAAGAAACATATAAATCGTGCACAAAATGGCGCAGCTGGTGGAGATGGCGCCTCGGGTTTGGCTAATAGTGGCTCAGATTTCTCAGATGATGAACAAATGCCTACACCGACAACTACATCGGCGGCGGAAAATATAATAAGCGCTGCCGTTACGTCCACAACAACCACAACCGCAGCGGCATGCGCACTGCGTACGCCGAAAATTCAGGAACTACTGAGCAAGACGAGCGAATGGCGTAGTGCACACTTGGCTGGTGAGCAAAAGGAGAACATTGCCGAAGAACAACCGAATGGACTGCACAGTGATCTGATTGGTAATCTCTTAGGTATAAGTGATCAGGGTATACTCAATAAGTTACTCTCGTCGGCGGATGAGGCAGCCAAGCTGTTGGGTGTGGAGAAATAA
Protein Sequence: MIATAAANTQQQLDAMQTTNVTKMERRDSTTSESSLEHLDLGRTPKKLSSHSSATSTPMHTAATTTTTSNNNNSVSNINKNKQTNRNINNELLNIKEANNTTTTAHHQRHSNDSDEANDYDDDDEESPDEQCGSKQNAHSARSQRHHKRRSTGARLDKRTSVHLEFNADDPDSLRKKFRFNRSTSASEQISQNNNESGFVDASCSSHYLNASAVSLAAAAAAAAAAVPSAMSTTTSPHSVPVAVGLNVTSPHNSMSASASASASATGSHSSSSAASSPRGCGTGLAIGSSASVSSPESGIGDRDREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKQHTSHSHNTSANNNSASGTRNTSTAGTNGSVSATATAATYAQLSHQHDLHGEGAKSTTTTTTTTASVDVNAVTDAGMSHATGAVIGGVVGGPAVVGVNGKRLHSSGVESCESDGGCSTDSSSSAISHSSNNNLNHNNNNNNNNNNSDNNNKNMINNINNNNIMSNNAQTTNNYSTNINAKRHSLGNFKRKSSDQPDATDADDLTMMTAIKRRVKTTINNNTMIIGEDVDEVGARPALMAHNAIESALGMVKTNASSASEDAGTTGDDLDDNGVEQKPYIACLVCPVCNTEDFADSHALDAHLDSQHADIPAKCRQCEVVFRTHRQLSLHPCTQRLLGQRPMPVVECFKCGRSFESDSALELHARECVTSVERPVRRSRSLSDSFATAPLTEAELEHKTSQLRNNFFRQLYLQSQKPFCAQSLISLPSPQHSMHEEDVDVDTANVSNTDIKLEADNEPTDQLSSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSSVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRSIIYHPSEDSTCDDPAKKMHMFSSPDFDDEMDLQYQQHQPKDRSTPVSHLKEMLTSESPATKPMKIQVKSLEQLLDKSTGSVGSYGESYDERTPAPPNMQHAEVAPIDLSMDVLDLSKKPTAKSVEKEIAPPVVPTTAENVVDPEKKLDFFSLVKENLNMPKMLELWSLSTQLPFIPDFGPLMNQMFAGNAAAAGNPFMPPGFDLNKGNMSASANMTPPMLPHMNSLMIDKLNTHPHATPDPNIMNQMLPSPLMTPPPPNSGMSMSRHSQIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHSMRGRGASNASTINSITHLQAAIAQAHNTVNQAQGNGLGASPISDQVKYAILAQQLKARKDTDLLQQALAHGSSSIANNHHMLLNAAGAALGPLAPPNGLQFSFNPLTQPTNVNGSIEDDEPKLVIDEDDDDDDDVEEIVDDNEEEEEEQQLANEHFENMRKFQTPMPVAEEVKTAAAATTEPGNETAKKVAETILEQAIKTGQKLNQAASKQPSSTFVAKPAPVKPVTAPTPTAPAAPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVAKLVDNATNNTVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNHSGTEDVAAPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEVRKRKADEQQAERERREKEQRMQLEKEQQNKLFKQLAVAQLQQQLNAASMSATANTPMNVATNAEADARAKENLSQLNADLPYKCHLCENSFAERYNCLEHIKKQHAPEFTLLLSKGAIVSEAEANQTQFIEDEERRAGEEANNFALLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHINRAQNGAAGGDGASGLANSGSDFSDDEQMPTPTTTSAAENIISAAVTSTTTTTAAACALRTPKIQELLSKTSEWRSAHLAGEQKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045676;
90% Identity: -
80% Identity: -