Nasi016204.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Neoceratitis asiatica
Gene Symbol
-
Assembly
GCA_030068015.2
Location
CM061529.1:27351819-27358248[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.011 0.76 10.6 3.1 1 23 248 270 248 270 0.98
2 28 7.9e-06 0.00054 20.5 1.7 1 23 276 298 276 298 0.98
3 28 0.025 1.7 9.5 2.4 1 23 381 403 381 403 0.98
4 28 0.0039 0.27 12.0 3.7 1 23 409 431 409 431 0.98
5 28 0.044 3 8.7 0.0 2 23 465 486 464 486 0.97
6 28 2.2 1.5e+02 3.3 4.5 1 23 558 581 558 581 0.95
7 28 0.016 1.1 10.1 0.3 1 22 588 609 588 609 0.95
8 28 1.5e-05 0.001 19.7 1.5 2 23 659 680 658 680 0.97
9 28 0.0063 0.43 11.4 0.6 1 23 687 710 687 710 0.96
10 28 0.42 29 5.6 0.7 2 23 718 739 717 739 0.96
11 28 0.026 1.8 9.4 1.1 1 23 820 843 820 843 0.96
12 28 1.9 1.3e+02 3.6 1.6 3 21 854 872 853 873 0.94
13 28 0.026 1.8 9.4 0.7 1 23 882 905 882 905 0.97
14 28 0.00044 0.03 15.0 1.3 2 23 921 942 920 942 0.97
15 28 0.0037 0.26 12.1 9.3 1 23 949 971 949 971 0.98
16 28 0.00023 0.016 15.9 1.4 1 23 1125 1148 1125 1148 0.96
17 28 0.015 1 10.2 1.3 1 23 1185 1208 1185 1208 0.96
18 28 1.5e-05 0.001 19.6 1.3 1 23 1223 1245 1223 1245 0.97
19 28 4.1e-05 0.0028 18.2 1.3 1 23 1252 1274 1252 1274 0.98
20 28 0.15 10 7.1 0.1 2 20 1301 1319 1300 1321 0.93
21 28 0.0079 0.54 11.1 1.9 1 23 1369 1392 1369 1392 0.97
22 28 0.019 1.3 9.8 1.4 1 23 1429 1452 1429 1452 0.96
23 28 0.00067 0.046 14.4 1.1 1 23 1480 1503 1480 1503 0.98
24 28 1.6e-05 0.0011 19.5 0.2 2 23 1536 1557 1535 1557 0.95
25 28 7.2e-05 0.005 17.5 2.3 1 23 1563 1585 1563 1585 0.99
26 28 1.5e-05 0.001 19.6 7.9 1 23 1591 1613 1591 1613 0.97
27 28 6.6e-06 0.00045 20.7 1.5 1 23 1619 1641 1619 1641 0.99
28 28 0.0077 0.53 11.1 0.1 1 21 1647 1667 1647 1671 0.90

Sequence Information

Coding Sequence
ATGGTTTCAATTCAGTGTCGTACTTGTCGTGAGACTAATGTTGGCAGTTTTCATCCTCTTTCGGATTTTCTGGACCAAGAGCGTAGTCCTGGAAAAACGTTTGCTGATTTTCTATGggatattgcaaaaattaatACTAAGAATGATGAGGACAAACGCTTGCCTCAACAAATTTGTGACGGTTGTTCTCGCAAGGTTAAGAATGCATACGCATTTGTGGTACAAGCAcaaatagcaaacaaaaaacTCCAATCTAGTTTATATAGCAAAAGAGTTAGCTCTAATGTCGATAAAGAATCGTCGTCTAAACGTATTGATTGTTTATTGGAGACACCGATTGATATACCTGCGCGACAAACGGAAATAAAAGAGGAGTTAATTGACGAAAAGGCAACTGAAATCAATCAAGATTTTATCAATGTCGATACAAGTTCTGATAAAGTAGTAGGTGGTATAGACGAAGTCGTACAACTTGTTAAGGAGGAAGCTAATACGGATTTAACTCAAAACGATGGTTATGCCGAAAGCATCAATACAGAAAACAGCATGGGAATAGACCCTATAACAACGGTGGAAACAATTTGGCACAATGAAGAAATCGAAAACGAAAAGCTGGAAACAcgatataatttaaatacaaacgaGAGCGATAATGATTCAGACACCCCGCTTTTAAAGCGTCTTCGATCACAACCATCTACAGAACAAAACGAATTTACATATTGTGAAGAAGATGGACGATTTCATTGTAGTAAATGCGAGAAATCTTTTGCTTGGAGGAAGGATGCCAAGCGCCATATGAAAATACATTCTGATATTTATCCGTACGAATGTACAGAGTGTAATCGTCGTTTTCCACGAAAGGATAAATATGAGAAGCACTTGAAAgtacatttcaaaaaagaacGAAAGGAAAAAGATGTTAAATATAAGAAACAGGCGTTCACAAATGATACCGACGATAGTAGTAACAGTGAGGATGACATAAAGGATGACGGACCGAGTTTGCAATCAGAGGCGAGGGATGATGAAATAAGTGATGATGAATATAGCGACGAAAATGAAGTTCCAATAAAACGGCGACGGGGTAGAAGTTCACCCAAAAAGGCAGAATTTACTTATAACAATGATGATAATCGTTATCATTGCAATAGATGTAACAAAGATTTTGCATGGAAGAAAGATGTAGAACGTCATATAAAAAGTCATTACGGTATTTTTCCTTTTGAATGCAGCCAATGTAATCATCGCTTCCAACGAAAAGATAAATTTGCTGAACACTTAAAGGTCCATGCAAAACGCGAAACAAGTGTACGCCGTAAATTATCCGTACAACGTGCAGAATGGAATTTTGCAGAACGTCTTTatactgaacaacgtttccgtTCGGTCGAGTGCAAGCTATGTCCTGGAGCTTTGGCGAGTATAGATGCTCTGCGCCAACATATGCAAACACATATTGAGGTCAATACAATACATTTGGATGAGGAAAGTGATGTAGTTAAAGAACTATATCCTAATTTTACTGATGATATAAAACTGGTTAAGCAACTGGTAAGTAAAGATATAAAAGATAAACGCTATGCAAAGTATTACTCAATTCTTAACGCTAATGGCTATGAAATGGCCTTAAGTGACTCTGATACAGAGCCAAGCACAAATGAACTTAAATATGAATGCGAATTGTGTCATGCCAAGTTTGGTCGGAAGCATCGAATTTTTCAGCATTCAAAATCAGATCATCCTGACATGGAACTTCCTTACAAATGTAATGTTTGTAAATTGGAATTTGTTAGTGCAACAATGTTTGAGCTACACTCAAGAACGCAGTGTAGGAATAAGGATAGAAAATATCAATGTCTCAGATGCCCAGGAAAGTTTGTTTGGGTTCAGAATCTTCAAGGTCATACGTGCTCCAATCGACTTAATGCAGCTTCAGCCAAGCGAACTGGGCAGCGTAAACGAGATTTGTTGCAGTGTAATTTCTGTGATAAAACTTTTGTTTATGCCACTGACTTTAAGCGTCATCAAGAGACTCATAACTTAATGAGCCGTTCTCATGTCTGTTCCATCTGTAGCCAACCTTTCTTGAAAGCTGAAAATTTGCGACAACATTTACGGCAGGCTCACGAACAGATCAAGCGTCGCATTGAATGTTGTTTATGCGGAGAGAAACCGAAAACACTTGCCGAACTTCGCACACATTTGTCACGACATTCGGATGGTTGGACAGATATCAAATACACAGAGGGGCAATATTTTAAGGTGCATTGGCCTCAAGGCTGTAAAGGAAAGGAAGGAGAAGTGGAACAGAGCATTATTATAGATTTTGCTGgacaaaatttaactaattattattCAGCAGTTGATGAGAGCGGCAATGAGTTAGACTTGAATGACTCGGAAAGTGAAGCAGAAGGTGGCGCACCTCAAAGCGGACAGCTTTTGTCAACCTCTTATACTTGCGATTTATGTAGTGAAGTTTTTTATAGAAGAACTCGTATGCTTCAGCATCAGTACAGTGCACACGCTGATGTAGAAGACACTTTACCACATGGTTGTACTCGTTGCGAAAAACGTTTTGTTTGCCTCAGTTTATTAGAGCAACATTATAAACGGATTTGTGGTAATATATATAAGCGTTACgattgcaaacgttgttcagcgcGATTTGTTTGGGAGGAAAATCTAAAGCAACACATGCAGCGACAACATATCGATCCCGAACAGCAGATAAGTCGACAACTTGCCAATAAACTACAATGTGATCAATGCCACAAAGTATTTGTATGGCCAAAGGATCTAACGCGACACAAACGCATACATATGCCTGATGATGAAAAATTCGAGTGTTTGTATTGTGAACGTAAATTTCATCGTAAGGATCATTTGCACACCCATTTGAAAACACATGGCGCAGGTGGCAAAATGGCAACTACAACTGCGGCGGCTAGCAAGCGTGAGCTTAATCGTAAAGTTAACGCTGTGGATCCGTATTTGTGCAGACCGAATGGCTGCAAATGTGTCCAATGCAAAATCTGTCTGTCCAAGCATACAAAAATAGCCGATCTACGTGCGCATATCTTGGAACACCGCTCGGATGTGACTTTATCACAACACGTTACAACCAATTCggaaatttctttacttttctacCCAGATGAGGCACCTATGTCTATGGATTTGTTGAAAGCACGGATGATGGCTGATATAGCAGCCGGGCAGATTGATCGATTTTACTCAATCACCAATGAATTAGGTCATGAGATAAGTATAAGCGGCTCTGATACTGACGACACAGACTCTGAGTCCGAGCCAGACGAAGCTTTATATCAAGCTATTGGTAGCATACGACATCCAAGACGATCCACCTACAATTGCGACTTGTGCAATATACAATTTTCGCGTAAGTACAAACTGTTCGCCCACCAATCGAGTGATCATAAATGGAATGAAGCACCACATGCATGCCAACATTGTCAAGCGCGCTTTCTGTGCGAGAAATTGTTACAGTCTCATTATCGCCACCAATGCAAGAATTTACTAAAGCGTTACTTATGTCGCAAATGTCCTCAGCGTTTCATGTGGAAGGAGAATCTTAAAATGCATTTGCGTACAATGCATCCGGATAGTGAAGAAGTTAAGAAGcTTTTTGCACCCAGCTCATTTGACTGTGAAGAGTGTTCGCGTAGTTTTCAAATGCAAAAGGATTTAACTCGTCACATGATGACACATCGCGCCGATGCTACTGTATTCCCATGTCTATGGTGTCCACGCAAATTCTATCGAAGAAGTAATTTGTATTTGCACATCAAACGCCACGGTATAACCTCACATCAGCTAAGTGCTGCCGCTTCCCATATTACTGCATGTAAAGGACCGAATGGATTAAAACAAGTTTATTGTCGCGTATGTAATATACAATTCGGAAGTTTATCTGCTTTGCGTGAACATTTGAGTCAAGAGGCGGCTGGAGTGTTATCCGCTCACCATAAATATGGTTCTCagcaaaattattcaataatgaatgaattGGGTTACGAATTGGATGTTGATGACTCCGAGACAGATGTAGATGGAAATGAAAGTACGCCACGTAAGGGATACAAATGTCAAATGTGCGGATTGGTTTGCAAAAGACGTTTTGAAATGGGCCAGCATCAGTTGTCGGTGCACAAACATGAACACATAACGCTGAAGTGTGAAAAATGTGTGTTTCGAACCGTATCAAGTGACATTATGGAACATCACTTGCGCACACAATGCAATAATATCGAAAAACAACATCAGTGCACTCAATGTTCATATAAATTCATGTGGCCCGAGAACTTGCAGACTCACATAAAATTAGTGCATCcagaagaaaaccaaaaaactaGTGATCTTGCTGAAGGTGAGGGTTCTGCATCACGCAGTGAGCCAGTACCGACTCAAATATTTCAATGCGATAAATGTGATAGTCGATATAACCGGAAAGATCGGCTAGTTGCTCATATTAAGAAGTTACATCCTGCAGACTCCATTGACGGTCCTAGTTGCAGCATCAAAAGTCCAAGAGCAAAAGTATCTAGTGATGATAGAAAACAaccgaaggaaaaaaatttcctttgtgCATTTTGTGGCCGAGCCGTAAGCTCTTCATCAAATCTTATTGTTCACATGCGTCGTCACACTGGCGAGAAACCATTTCAATGTGAATTCTGCGATAAAGCATTTCCACGATCATCGGATTTAGCATGTCATCGACGTACCCATACAGGCGAGAAACCGCATCATTGTACGGTATGTGGCAAATCTTTTTCGCGTTCATACAAGTTACATACGCACATGCGTATACATTCTGGTGAGAGACCGTACAAATGTTCGTTTTGTGAGAAAAGCTTCACACAATCGAATGATCTCGCTCTACATGTGCGTCGGCACACTGGAGAACGGCCGTATGCATGCAATGTGTGCGATGAGCGTTTTATTCAAGGCACAGCTCTAAAGAATCACCGCGTAATGCTGGGGCACTACGAAGAAGTTGAGGAGCAAGCAAGCAGCATGTTGCAATTGGACGATGAGGGTAACAGTTTGATACTGTTATAA
Protein Sequence
MVSIQCRTCRETNVGSFHPLSDFLDQERSPGKTFADFLWDIAKINTKNDEDKRLPQQICDGCSRKVKNAYAFVVQAQIANKKLQSSLYSKRVSSNVDKESSSKRIDCLLETPIDIPARQTEIKEELIDEKATEINQDFINVDTSSDKVVGGIDEVVQLVKEEANTDLTQNDGYAESINTENSMGIDPITTVETIWHNEEIENEKLETRYNLNTNESDNDSDTPLLKRLRSQPSTEQNEFTYCEEDGRFHCSKCEKSFAWRKDAKRHMKIHSDIYPYECTECNRRFPRKDKYEKHLKVHFKKERKEKDVKYKKQAFTNDTDDSSNSEDDIKDDGPSLQSEARDDEISDDEYSDENEVPIKRRRGRSSPKKAEFTYNNDDNRYHCNRCNKDFAWKKDVERHIKSHYGIFPFECSQCNHRFQRKDKFAEHLKVHAKRETSVRRKLSVQRAEWNFAERLYTEQRFRSVECKLCPGALASIDALRQHMQTHIEVNTIHLDEESDVVKELYPNFTDDIKLVKQLVSKDIKDKRYAKYYSILNANGYEMALSDSDTEPSTNELKYECELCHAKFGRKHRIFQHSKSDHPDMELPYKCNVCKLEFVSATMFELHSRTQCRNKDRKYQCLRCPGKFVWVQNLQGHTCSNRLNAASAKRTGQRKRDLLQCNFCDKTFVYATDFKRHQETHNLMSRSHVCSICSQPFLKAENLRQHLRQAHEQIKRRIECCLCGEKPKTLAELRTHLSRHSDGWTDIKYTEGQYFKVHWPQGCKGKEGEVEQSIIIDFAGQNLTNYYSAVDESGNELDLNDSESEAEGGAPQSGQLLSTSYTCDLCSEVFYRRTRMLQHQYSAHADVEDTLPHGCTRCEKRFVCLSLLEQHYKRICGNIYKRYDCKRCSARFVWEENLKQHMQRQHIDPEQQISRQLANKLQCDQCHKVFVWPKDLTRHKRIHMPDDEKFECLYCERKFHRKDHLHTHLKTHGAGGKMATTTAAASKRELNRKVNAVDPYLCRPNGCKCVQCKICLSKHTKIADLRAHILEHRSDVTLSQHVTTNSEISLLFYPDEAPMSMDLLKARMMADIAAGQIDRFYSITNELGHEISISGSDTDDTDSESEPDEALYQAIGSIRHPRRSTYNCDLCNIQFSRKYKLFAHQSSDHKWNEAPHACQHCQARFLCEKLLQSHYRHQCKNLLKRYLCRKCPQRFMWKENLKMHLRTMHPDSEEVKKLFAPSSFDCEECSRSFQMQKDLTRHMMTHRADATVFPCLWCPRKFYRRSNLYLHIKRHGITSHQLSAAASHITACKGPNGLKQVYCRVCNIQFGSLSALREHLSQEAAGVLSAHHKYGSQQNYSIMNELGYELDVDDSETDVDGNESTPRKGYKCQMCGLVCKRRFEMGQHQLSVHKHEHITLKCEKCVFRTVSSDIMEHHLRTQCNNIEKQHQCTQCSYKFMWPENLQTHIKLVHPEENQKTSDLAEGEGSASRSEPVPTQIFQCDKCDSRYNRKDRLVAHIKKLHPADSIDGPSCSIKSPRAKVSSDDRKQPKEKNFLCAFCGRAVSSSSNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHHCTVCGKSFSRSYKLHTHMRIHSGERPYKCSFCEKSFTQSNDLALHVRRHTGERPYACNVCDERFIQGTALKNHRVMLGHYEEVEEQASSMLQLDDEGNSLILL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00303940;
90% Identity
iTF_00303940;
80% Identity
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