Basic Information

Insect: Ceratitis capitata
Gene Symbol: -
Assembly: GCA_000347755.4
Location: NW:60006-66167[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0059 0.3 11.1 3.1 1 23 246 268 246 268 0.98

2 28 9.5e-06 0.00048 19.9 0.7 1 23 274 296 274 296 0.99

3 28 0.019 0.99 9.5 2.4 1 23 379 401 379 401 0.98

4 28 0.0078 0.4 10.7 4.1 1 23 407 429 407 429 0.98

5 28 0.0091 0.46 10.5 0.0 2 23 463 484 462 484 0.97

6 28 0.48 25 5.1 2.8 1 23 556 579 556 579 0.95

7 28 0.013 0.64 10.1 0.3 1 22 586 607 586 607 0.95

8 28 1.1e-05 0.00058 19.7 1.5 2 23 657 678 656 678 0.97

9 28 0.0049 0.25 11.4 0.6 1 23 685 708 685 708 0.96

10 28 0.21 11 6.2 0.4 2 23 716 737 715 737 0.96

11 28 0.0056 0.28 11.2 0.5 1 23 818 841 818 841 0.94

12 28 3.3 1.7e+02 2.5 3.1 1 21 850 870 850 871 0.91

13 28 0.088 4.5 7.4 1.9 1 23 880 903 880 903 0.95

14 28 0.0011 0.054 13.5 0.4 2 23 919 940 918 940 0.97

15 28 0.0058 0.29 11.1 9.1 1 23 947 969 947 969 0.98

16 28 4.9e-05 0.0025 17.7 1.2 1 23 1123 1146 1123 1146 0.97

17 28 0.012 0.6 10.2 1.3 1 23 1183 1206 1183 1206 0.96

18 28 1.2e-05 0.00059 19.6 1.3 1 23 1221 1243 1221 1243 0.97

19 28 3.2e-05 0.0016 18.2 1.3 1 23 1250 1272 1250 1272 0.98

20 28 0.1 5.3 7.2 0.1 2 20 1299 1317 1298 1319 0.93

21 28 0.0061 0.31 11.1 1.9 1 23 1367 1390 1367 1390 0.97

22 28 0.0066 0.33 11.0 1.3 1 23 1427 1450 1427 1450 0.97

23 28 0.00079 0.04 13.9 1.7 1 23 1478 1501 1478 1501 0.98

24 28 2.2e-05 0.0011 18.8 0.2 2 23 1534 1555 1533 1555 0.95

25 28 5.6e-05 0.0029 17.5 2.3 1 23 1561 1583 1561 1583 0.99

26 28 1.2e-05 0.00059 19.6 7.9 1 23 1589 1611 1589 1611 0.97

27 28 6.1e-06 0.00031 20.5 1.6 1 23 1617 1639 1617 1639 0.99

28 28 0.0027 0.14 12.2 0.1 1 22 1645 1666 1645 1669 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0059	0.3	11.1	3.1	1	23	246	268	246	268	0.98
2	28	9.5e-06	0.00048	19.9	0.7	1	23	274	296	274	296	0.99
3	28	0.019	0.99	9.5	2.4	1	23	379	401	379	401	0.98
4	28	0.0078	0.4	10.7	4.1	1	23	407	429	407	429	0.98
5	28	0.0091	0.46	10.5	0.0	2	23	463	484	462	484	0.97
6	28	0.48	25	5.1	2.8	1	23	556	579	556	579	0.95
7	28	0.013	0.64	10.1	0.3	1	22	586	607	586	607	0.95
8	28	1.1e-05	0.00058	19.7	1.5	2	23	657	678	656	678	0.97
9	28	0.0049	0.25	11.4	0.6	1	23	685	708	685	708	0.96
10	28	0.21	11	6.2	0.4	2	23	716	737	715	737	0.96
11	28	0.0056	0.28	11.2	0.5	1	23	818	841	818	841	0.94
12	28	3.3	1.7e+02	2.5	3.1	1	21	850	870	850	871	0.91
13	28	0.088	4.5	7.4	1.9	1	23	880	903	880	903	0.95
14	28	0.0011	0.054	13.5	0.4	2	23	919	940	918	940	0.97
15	28	0.0058	0.29	11.1	9.1	1	23	947	969	947	969	0.98
16	28	4.9e-05	0.0025	17.7	1.2	1	23	1123	1146	1123	1146	0.97
17	28	0.012	0.6	10.2	1.3	1	23	1183	1206	1183	1206	0.96
18	28	1.2e-05	0.00059	19.6	1.3	1	23	1221	1243	1221	1243	0.97
19	28	3.2e-05	0.0016	18.2	1.3	1	23	1250	1272	1250	1272	0.98
20	28	0.1	5.3	7.2	0.1	2	20	1299	1317	1298	1319	0.93
21	28	0.0061	0.31	11.1	1.9	1	23	1367	1390	1367	1390	0.97
22	28	0.0066	0.33	11.0	1.3	1	23	1427	1450	1427	1450	0.97
23	28	0.00079	0.04	13.9	1.7	1	23	1478	1501	1478	1501	0.98
24	28	2.2e-05	0.0011	18.8	0.2	2	23	1534	1555	1533	1555	0.95
25	28	5.6e-05	0.0029	17.5	2.3	1	23	1561	1583	1561	1583	0.99
26	28	1.2e-05	0.00059	19.6	7.9	1	23	1589	1611	1589	1611	0.97
27	28	6.1e-06	0.00031	20.5	1.6	1	23	1617	1639	1617	1639	0.99
28	28	0.0027	0.14	12.2	0.1	1	22	1645	1666	1645	1669	0.90

Sequence Information

Coding Sequence: ATGGTTTCAATTCAGTGTCGTACTTGCCGAGAGAGGAATGTTGGTAGTTTTCATCCCCTTTCAGATTTTCTAGACGAAGAAAGTAATCCTGGGAAAACGTTTGGTGATTTTCTATGGGATATTGCAAAAATTGATAATACCACCGATGAAGCCAAACGATTGCCTCAACAGATTTGCGGCGGATGCTCTCGCAAGGTTAAGAACACATATGCATTCGTGGTACAAGCACAGATAGCAAACCAAAAATTCCAAGTCagtttgtataacaaaaaagttaGCTTTAATGTTGATAAAGAATCGACCGTAAAACGTGATGATTGTTTATTGGAGACACCTATTGATATACCTGTGCGCCAAACTGAAATCAAAGAAGAGGTGATTGACGAGAAGATAACCGAGACCAGTCAAGAAAACGTAGATAAAAGTGCTGATACAGTAGAAGGTGGAATAAACGAAGTCGTACAGCTTGTTAAAGAGGAAGCAGTTGCAGATTTAAATCAAGATGATGATTACGCCGAAAGCATTAATacagAAAACAGCATGGGAATAGATCCTATTACCACTGTGGAAACAATTTGGAACAATGAAGAAATCGAAAATGAAAAGCTGGAAATACAAAGTAATTTGGACACTAGCGATAGTGAGAATGATTCAGACACCCCGCTTTTAAAACGTTTTCGATCCCAACCATCTACAGAAACAAACGAATTTACATATTGCGAGGAAGATGGACGATTTCATTGTAATAAATGTGAGAAATCTTTTGCGTGGAGAAAGGATGCCAAGCGCCATATGAAAATACATTCTGATATTTATCCATACGAATGCGCAGAGTGCAATCGTCGCTTCCCTCGAAAggataaatatgaaaatcatttgaGAGTACATTCCAAAAAAGATcggagagaaaaaaatgttaaaaataaaaagcagcaATTTACAAAAGACACCAGTGATAGCAGtaataacgAGGAGGGCAAGAAGGATGACGGGCCGAGTTTGCAGTCGGAGGCGGTGGATGATGAAATAAGTGACGATGAATGTAGCGACGAAGATGATGTTCCGATAAAAAGACGACGAAGACGAACTTCATCTAAAAAGTCAGAATTTACCTATAATAATGATGATAACCGTTATCATTGTAATCGATGCAACAAAGATTTTGCATGGAAGAAAGATGTAGAACGTCACATAAAAAGCCATTACGGTATTTTTCCTTTTGAATGTAGCCAATGCAATCATCGCTTCCAACGAAAGGATAAATTTGCTGAACACTTAAAGTTACATGCAAAACGTGAAACCGGTATACGTCGTAAATTGTCTGTACAACGGGCAGAATGGAATTTTGCAGAACGTCTTTATACTGAACAACGTTTCCGTTCGGTCGAGTGCAAGCTGTGTCCCGAGGCTTTGCCGAGCATAGTGGCTCTACGCCAGCACATGCAAACACATATCGAGGCCGATACAATACATTTAGATGCTGAAAGTGACGTAGTTAAAGAGCTATATCCTAATTTTACTGACGACATTAAACTAGTTAAAGAACTGGTAAGTAAAGACATAAAAGATAAACGCTATGCGAAGTATTACTCAATTTTAAACGCCAACGGCTATGAAATGGCCTTAAGTGACTCTGATACAGAGCAAAGCACAAATGAGCCTAAATACGAATGCGAATTGTGTCATGCGAAGTTTGGGCGGAAGTATCGAATTTTCCAGCATTCAAAATCAGATCATCCTGACATGGAACTTCCCTACAAATGCAATGTTTGTAAATTGGAATTTGTTAGTGCAACAATGTTTGAACTACACTCGCGGACGCAGTGTAGGAACAAGGATAGAAAATATCAATGTCTCAGATGCCCAGGAAAGTTTGTTTGGGTCCAGAATCTTCAGAGTCATACATGCTCCAATCGACTTAGTGTAGCTGCAGCCAAGCGACCTGGGCAGCGTAAACGTGATTTGTTACAGTGTAATTTCTGTgataaaacttttgtttatgcAACAGACTTTAAACGTCATCAAGAGACTCATAACTTAATGAGCCAGTCTCATGTCTGCTCCATCTGTAGTCAGCCTTTCTTGAAAGCTGAAAATTTGAGACAACATTTGCGGCAGGCACACGAGCAGATCAAACGCCGCATTGAATGTTGCTTATGCGGAGAAAAACCGAAAACACTAGCCGAACTCCGAGCACATTTGTCAAGACATTCGGATGGTTGGACAGATATCAAATACACTGAGGGGCAATATTTTAAGGTACATTGGCCTCAAGGCTGCAAAGGAAAAGAAGGAGAGGTGGAACAGAGTATTATTATAgattttgctggaaaaaatttaactaattattattCAGCGGTTGATGAGAGTGGCAACGAGTTAGACTTAAATGATTCGGAAAGTGATGCAGAAGGCAGCACACCTCAAAGCGGGCAGCTTTTGTCCACCTCTTATACATGCGATTTGTGTGGTGAAGTTTTTTATAGGAGAACTCGTATCCTTCAGCATCAGTACAGTGCACACGCTGATGTGGAAGACACTTTGCCACATAACTGTACTCGCTGCGAAAAACGATTCGTTTGTCTCGGCTTATTAGAACAACACTATAAACGAATTTGTGGCAATATATATAAGCGCCACGATTGCAAACGATGTTCAGCGCGATTTGTTTGGGAAGAAAATCTAAAGCAACACATGCAACGACAACATATTGATCCTGAGCAGCAGATAAGCCGGCAACTGGCCAATAAACTACAATGCGAACAATGTTACAAAGTATTTGTTTGGCCGAAAGATCTAACGCGACACAAACGCATCCATATGCCAGATGATGAAAAGTTCGAGTGTTTGTATTGTGAACGTAAGTTTCATCGCAAAGATCATTTGCACACCCACTTGAAGTCACATGGCGCAGGTGGTAAAATGGCGACTACAACTGCGGCAGCTAGCAAGCGTGAGCTTAATCGTAAAGTTAACGCTGTCGATCCGTATTTGTGCAGACCGAATGGCTGCAAGTGTGTCCAATGCAAAATTTGTCTGTCGAAGCATACAAAAATAGCCGATTTACGTGCACACATCTTGGAGCACCGAACAGATGTGACTTTATCACAACATGTTACAACAAATTCAGAAATATCTTTACTTTTCTACCCTGATGAGGCACCCATGTCTATGGACTTGCTAATGGCACGGATGATGGCTGATATAGCTGCTGGGCAGCTCGATCGATTTTACTCAATCACCAATGAATTAGGTCATGAGATAAGCATAAGCGGCTCTGATACTGACGACACAGACTCAGAGTCCGAGCCAGACGAAGCTTTATATCAAGCTATCGGTAGCATACGACATCCCCGACGATCCACCTACAAATGCGACTTGTGCAATATACAATTTTCTCGTAAGTACAAACTATTTGCCCATCAAGCTAGCGATCATAAATGGGATGAAGCACCACATGTATGTCAGCATTGCCAAGCGCGATTTCTGTGCGAGAAATTGTTACAGTCTCATTATCGTCATCAGTGCAAAAATTTGCTAAAGCGTTATTTATGTCGCAAATGTCCTCAGCGTTTCATGTGGAAGGAGAACCTTAAAATGCATTTGCGTACAATGCACCCGGATAGTGACGAGGTAAAGAAGctttttgcaCCCAGCTCATTTGACTGTGAAGAGTGTTCGCGTAGTTTTCAAATGCAAAAGGACCTAACTCGTCATATGATGACACATCGCGCCGATGCTACAGTATTCCCATGTCTGTGGTGTCCACGAAAATTTTACCGAAGAAgtaatttgtatttgcatatcaAACGCCATGGTATAACATCACACCAGCTAAGCGCTGCCGCTTCTCATATCACAGCATGTAAGGGACCAAATGGGTTAAAACAAATTCATTGTCGCGTATGTAATATACAGTTCGGGAGTTTGTCTGCTCTACGTGTACATCTGAGTCAAGAGACGGCTGGGGTGTTATCCACCCACCACAAATATGGCTCTCagcaaaattattcaataatgaaTGAGTTGGGCTACGAATTGGACATTGATGACTCCGAGACAGATGCAGATGGTAATGGAAGTACGCCACGAAAGGGGTACAAATGCCAAATGTGTGGATTGGTTTGCAAAAGACGCTTTGAAATGGGCCAGCATCAGCTGTCGGTGCACAAGCATGAACACATAACGctcaaatgtgaaaaatgcgTATTTCGAACAGTGTCTAGTGACATTATGGAACATCACTTGCGTACGCAATGCAATAATATCGAAAAGGTACATCAATGCACTCAGTGTTCATATAAATTCATGTGGCCCGAGAATTTGCAGACTCACATAAGGTTGGTGCATCcagaagaaaaccaaaaaagtagTGATCATGCTGAAGGAGAAGCTTCCGCATCACGCAGTGAGCCAGTACCAGCTCAAATATTCCAATGCGATAAGTGTGATAGTCGTTATAATCGAAAGGATCGGCTTGTTGCTCATATCAAGAAATTTCACCCTGCTGACCCCAGTGACGGTCCTAGTTGCAGCATCAAACTTCCAAGAGCAAAAGTTTCAAGTGATGAGAAAAAACAAGCAAAggagaaaaattttctttgcgcTTTTTGTGGGCGAGCCGTGAGCTCTTCATCAAATCTTGTTGTTCACATGCGTCGTCACACTGGCGAGAAACCATTTCAATGTGAATTCTGCGATAAAGCATTTCCACGATCATCTGATTTGGCATGCCATCGACGTACACATACAGGCGAAAAACCTCATCATTGCACTGTATGTGGCAAGTCCTTTTCGCGTTCATACaagttacatacacacatgcgtaTACATTCTGGTGAGCGACCGTACAAGTGTTCGTTCTGTGAGAAAACCTTCACACAATCGAACGATCTTGCTCTGCATGTGCGTCGACACACTGGAGAAAGACCGTATGCATGTAATGTGTGCGATGAACGTTTTATTCAAGGCACAGCCTTGAAGAATCATCGGCTAATGCTGGGACACTACGAAGAAGTTGAAGAGCAATCAAGCAGCATGTTGCAGTTGGACGATCAGGGTAACAGTTTAATACTGTTATGA
Protein Sequence: MVSIQCRTCRERNVGSFHPLSDFLDEESNPGKTFGDFLWDIAKIDNTTDEAKRLPQQICGGCSRKVKNTYAFVVQAQIANQKFQVSLYNKKVSFNVDKESTVKRDDCLLETPIDIPVRQTEIKEEVIDEKITETSQENVDKSADTVEGGINEVVQLVKEEAVADLNQDDDYAESINTENSMGIDPITTVETIWNNEEIENEKLEIQSNLDTSDSENDSDTPLLKRFRSQPSTETNEFTYCEEDGRFHCNKCEKSFAWRKDAKRHMKIHSDIYPYECAECNRRFPRKDKYENHLRVHSKKDRREKNVKNKKQQFTKDTSDSSNNEEGKKDDGPSLQSEAVDDEISDDECSDEDDVPIKRRRRRTSSKKSEFTYNNDDNRYHCNRCNKDFAWKKDVERHIKSHYGIFPFECSQCNHRFQRKDKFAEHLKLHAKRETGIRRKLSVQRAEWNFAERLYTEQRFRSVECKLCPEALPSIVALRQHMQTHIEADTIHLDAESDVVKELYPNFTDDIKLVKELVSKDIKDKRYAKYYSILNANGYEMALSDSDTEQSTNEPKYECELCHAKFGRKYRIFQHSKSDHPDMELPYKCNVCKLEFVSATMFELHSRTQCRNKDRKYQCLRCPGKFVWVQNLQSHTCSNRLSVAAAKRPGQRKRDLLQCNFCDKTFVYATDFKRHQETHNLMSQSHVCSICSQPFLKAENLRQHLRQAHEQIKRRIECCLCGEKPKTLAELRAHLSRHSDGWTDIKYTEGQYFKVHWPQGCKGKEGEVEQSIIIDFAGKNLTNYYSAVDESGNELDLNDSESDAEGSTPQSGQLLSTSYTCDLCGEVFYRRTRILQHQYSAHADVEDTLPHNCTRCEKRFVCLGLLEQHYKRICGNIYKRHDCKRCSARFVWEENLKQHMQRQHIDPEQQISRQLANKLQCEQCYKVFVWPKDLTRHKRIHMPDDEKFECLYCERKFHRKDHLHTHLKSHGAGGKMATTTAAASKRELNRKVNAVDPYLCRPNGCKCVQCKICLSKHTKIADLRAHILEHRTDVTLSQHVTTNSEISLLFYPDEAPMSMDLLMARMMADIAAGQLDRFYSITNELGHEISISGSDTDDTDSESEPDEALYQAIGSIRHPRRSTYKCDLCNIQFSRKYKLFAHQASDHKWDEAPHVCQHCQARFLCEKLLQSHYRHQCKNLLKRYLCRKCPQRFMWKENLKMHLRTMHPDSDEVKKLFAPSSFDCEECSRSFQMQKDLTRHMMTHRADATVFPCLWCPRKFYRRSNLYLHIKRHGITSHQLSAAASHITACKGPNGLKQIHCRVCNIQFGSLSALRVHLSQETAGVLSTHHKYGSQQNYSIMNELGYELDIDDSETDADGNGSTPRKGYKCQMCGLVCKRRFEMGQHQLSVHKHEHITLKCEKCVFRTVSSDIMEHHLRTQCNNIEKVHQCTQCSYKFMWPENLQTHIRLVHPEENQKSSDHAEGEASASRSEPVPAQIFQCDKCDSRYNRKDRLVAHIKKFHPADPSDGPSCSIKLPRAKVSSDEKKQAKEKNFLCAFCGRAVSSSSNLVVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHHCTVCGKSFSRSYKLHTHMRIHSGERPYKCSFCEKTFTQSNDLALHVRRHTGERPYACNVCDERFIQGTALKNHRLMLGHYEEVEEQSSSMLQLDDQGNSLILL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045628;
90% Identity: iTF_01045628;
80% Identity: -