Basic Information

Insect: Neoceratitis asiatica
Gene Symbol: ftz-f1
Assembly: GCA_030068015.2
Location: CM061526.1:23481889-23493663[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 6.8e-19 4.8e-15 56.1 0.4 2 76 16 91 15 122 0.69

2 2 6.3e-74 4.4e-70 237.4 0.8 156 409 202 448 166 449 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	6.8e-19	4.8e-15	56.1	0.4	2	76	16	91	15	122	0.69
2	2	6.3e-74	4.4e-70	237.4	0.8	156	409	202	448	166	449	0.91

Sequence Information

Coding Sequence: atgcgtgtgtttaatgttgtaacagtatttatgtccctaacaaCCGTTCGAGCGGATCGAATGCGTGGTGGACGTAATAAATTTGGGCCCATGTACAAACGTGATCGGGCGCGAAAATTACAAGTGATGCGGCAACGACAACTCGCCTTGCAAGCGCTACGCACATCAATCGGTTCGGTTGAGATGAAATCATCACCGCTCTCACCAGGATACCAACAAGCATATccgaatatgaatataaaacaagaaatacaaATACCTCAgGTGTCCTCACTCACACAATCACCCGACTCATCACCCAGCCCCATTGCCATTGCGCTCGGACAGGTTAATACGAGTGGCGGTGTGATAACGACGCCAATGAATGGTGGTAAtggtggaggtggtggtggtggtggcagtggtggcggcggcggcggtggaagcgctggtggtggcggtggtagtGGCAATGGTATCAATGCCGgtgtcaataataataataacagcaacaataccAGCGATGGACTCAACCGCAGTAGCAGTGGCAATTGTCATGACACTGGTACTGGATCTCTACAGAATGCGTCCGAATCGAAATTGTGctTCGACTCTGGCACACATCCTTCAAGCACCGCTGACTCCATCATAGAGCCACTGAGAGTGTCACCAATGATACGTGATTTCGTGCAATCGATAGACGATCGAGAATGGCAGACGCAACTCTTCGCATTGCTACAAAAACAAACCTACAATCAAGTGGAAGTTGATCTCTTCGAGTTAATGTGCAAAGTGTTGGATCAGAATTTGTTCTCACAAGTGGATTGGGCTAGAAACACAGTCTTCTTCAAAGATCTTAAGGTCGATGACCAAATGAAATTGCTGCAGCATTCCTGGTCCGATATGCTTGTACTCGATCATTTACATCAGCGAATACACAACGGACTACCCGATGAAACGCAATTGAATAACGGACAAGTATTTAATTTGCTCTGGCTTGGCCTATTGGGCGTGCCACAGCTGGCGGACTATTTCAATGAGTTGCAAAATCGCTTGCAGGATTTAAAATTCGATATGGGCGattatgtgtgtatgaaatTCCTAATACTACTCAATCCAGATGTACGTGGCATTGCTAACAAGAAGACGGTCTTAGAGGGACAAGAAAATGTGCAAGCAGCGCTACTGGACTACACGCTAACCTGCTATCCATCAGTGACgGATAAATTTCGGCGACTGCTTAGCATACTGCCCGATATACATGCATTGGCTTCGCGAGGCGAAGATCATCTCTATTCAAAACACTGCGCCGGTAGTGCGCCCACCCAGACGCTACTCATGGAAATGTTACATGCAAAAcgaaaagcataa
Protein Sequence: MRVFNVVTVFMSLTTVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRTSIGSVEMKSSPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNTSGGVITTPMNGGNGGGGGGGGSGGGGGGGSAGGGGGSGNGINAGVNNNNNSNNTSDGLNRSSSGNCHDTGTGSLQNASESKLCFDSGTHPSSTADSIIEPLRVSPMIRDFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHQRIHNGLPDETQLNNGQVFNLLWLGLLGVPQLADYFNELQNRLQDLKFDMGDYVCMKFLILLNPDVRGIANKKTVLEGQENVQAALLDYTLTCYPSVTDKFRRLLSILPDIHALASRGEDHLYSKHCAGSAPTQTLLMEMLHAKRKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357984;
90% Identity: iTF_00192122;
80% Identity: iTF_01045538;