Nasi001652.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- Hr39
- Assembly
- GCA_030068015.2
- Location
- CM061524.1:61833430-61840135[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.051 3.6e+02 0.5 2.3 142 184 45 87 3 96 0.67 2 4 0.29 2.1e+03 -2.0 0.4 119 160 207 252 138 285 0.42 3 4 3 2.1e+04 -9.8 11.7 55 144 361 386 241 480 0.55 4 4 2.4e-98 1.7e-94 317.8 3.8 1 408 573 952 573 952 0.87
Sequence Information
- Coding Sequence
- atgtcctccACAAAGACAGAGAACGCTACTGCTGCTGGCGCCAATTCCACAGTGACCGCCTTTGGCACAACGTTGGCCAGCAGTGTATTCCAAATGCCCGTGAATATGCACAGCCATCCACAAGTAATTGCGAATGGTAGTAATAATAGTCACAGTAGTActaatggcacaacaacaacatcaacaactacCACTGCCACCACCACTACAACACGCAACAATATTTCTGTCACGAATATCAAATGTGAAATGGATGAGAGTATAGCGGCATCGTTGATGCCTAATGGCAATATTGTGCCCGTTATAGCATCGACGGGGGCAGTAGCAGCTAGTTATTATAACGGTGTCAGTGCGGGGAGCGGGAGTGGTGTAGGTGCCGGCGTTCTCGGCGTGGGCATACGTATACCAGTGACGAAAGCGGAAGATTCCGATTCAGAGACTGAGTTGacgaatattgaaaatttgaaggTGACGCGTCGTGTGCATAACAGTGCGGAGAACACCACGTCTGACAACTCTACCAGTGTTGGTGGCAGCTGTTTTAATGGAAGTCACAATAAGAATGGACCGCGCCCTATGTCCTGGGAGGGCGAACTCTCCGAAACGGAGACGACTGAAACAGAGCTCATGGAGACGGAAAACTCGTTAAGCAACAGCGGCATGACGCACATGAATGATATGAACGCGTCTAGTACCGGTGCCGGTGGTAGCATGGGTATGACGGTAATCAAGAGTGAGGCGACCACAACAACGCCTGGACATCCGTTGGCGCCAACACCTACACATCCCATAAAACCTGAGCAGATGGAACAGTTATCTGTTGAAGTGCACGGTGGTGCTTCCGTAGCGGGTATAGGCCCCACACCTGTGCGCAATGGTTTAGGCAGTAGTAGCAGCGCAGGTAGTCTCTATTCTGCCACACACACAAAACTCGCGCCTACGCAAAGTGATCCGATAAATCTAAAGTATGAACCCGATACCTCCGCTACAGGTTCATTTTCAGCTGGCGCTAATGTTAATTCGCCACTTTTGACACGCAACAAATCAGCTACATTGCCACTGCCTGCCAATCCCAGCCCAGATTCTGCCATACATTCCGTCTATACGCACAGCTCACCGTCGCAATCGCCACTAACGTCACGGCATGCACCCTACACACCGTCGCTTAGTCGCAACAATAGTGATGCGTCGCATAGCTCTTGCTACTCCTACAGTTCCGAGTTTAGCCCAACACATTCACCTATACAGGGTCGACATGCGCCACCCGCACCTGCACTCTATGGCAACTTCAACGGTGGATCGTTGCATCATTCGGTCATTTATCGTCCCATCACGGTAGCGGAAAATGCCGCTGCCGGAGCGTCTGCTAATGGCAGTGCTGGCGTTAACTGCAGTGCGGAAGCGCAAAATCTTAGTATGGATTCGAAAGTCTCGCCACTCAATATTGGACTCGAAGGCTTGCCAGCTTCACCAGCTGGTATTTCACGTCAGCAGCTCATCAATTCGCCATGCCCCATTTGTGGTGATAAAATTTCAGGCTTCCATTATGGTATTTTCTCATGTGAATCTTGTAAGGGCTTCTTCAAGCGCACTGTCCAGAATCGTAAAAACTACGTGTGCGTACGTGGCGGTCCATGTCCGGTTAGTATTTCGACGCGTAAGAAATGCCCGGCATGTCGTTTCGAGAAGTGTCTGCAGAAGGGCATGAAGCTCGAGGCGATACGTGAGGATCGTACACGTGGAGGACGTTCCACATACCAGTGCTCATATACGTTACCCAATTCGATGCTCAGTCCGCTGCTGAGTCCGGAACAGCAAGGAGTAGCGGCGGCAGTGGCGGCTGCCGCAGTGGCTGCGGCCAGTCAACAACAACCACATGGCCGTCTGGGTGCACAGATGTCGCATGGATTaactgcacaacaacaacaacagcatgcaATGAATGGTCTGGCTGGATGTCTCGGCGGTGGCACAACGCAAGCCACAATTAAATCGGAGCAGTGTGAGGAGAGTAGCGCCTCAGCGCGGCCAACTAACATTCCATTACTACTACAGGAAATCATGGATGTTGAACATCTATGGCAATACAATGAAGCTGAATTGGCACGTCTCAATCAACCAATCTCCACATCGTCTTCTTCCTCTTCCAATGCCTCTTCAACGTCTTCATCGTCCGCCGTGAATGGCGGTGTTGGTGGTGGCACAACCAATCCGCAAATGACAAATCCTCTCCTAGCCAGTGCTGGTTTTGGCAATGGTGAGAATACCAATCCCGATCTGATTGCACATTTATGTAATGTGGCCGATCATCGATTGTATAAGATTGTGAAATGGTGCAAGAGTTTGCCGCTATTCAAACATATTTCGATCGACGATCAAATTTGCCTACTAATCAATTCATGGTGTGAATTGTTGCTATTTTCGTGCTGCTATCGTTCAATCGATACGCCAGGCGAAATTAAGATGTCGCAAGGCAAAAAGATTAGTTTAGCGCAGGCAAAATCAAGTGGCTTACAGGCCTGCATTGAACGAATGTTGAACCTGACGGAAAACTTGAGACGCTTACGTGTCGATCGCTATGAATATGTTGCCATGAAAGTGATTGTGCTGTTGCAGTCGgACACCACCGAGTTGCATGAACCAGTCAAAGTACGTGAATGCCAAGAGAAGGCGTTGCAAGCCTTGCAGGCTTACACTCTGGCACACTACCCTGATACGCCGTCTAAATTTGGTGAACTGTTGCTGCGTATACCAGATCTGCAAAAGACATGCCAGCTTGGCAAGGAGATGCTCACAATTAAATCACGTGATGGCGGTGATTTCAATTTACTTATGGAGCTGCTGCGTGGAGAACATTGA
- Protein Sequence
- MSSTKTENATAAGANSTVTAFGTTLASSVFQMPVNMHSHPQVIANGSNNSHSSTNGTTTTSTTTTATTTTTRNNISVTNIKCEMDESIAASLMPNGNIVPVIASTGAVAASYYNGVSAGSGSGVGAGVLGVGIRIPVTKAEDSDSETELTNIENLKVTRRVHNSAENTTSDNSTSVGGSCFNGSHNKNGPRPMSWEGELSETETTETELMETENSLSNSGMTHMNDMNASSTGAGGSMGMTVIKSEATTTTPGHPLAPTPTHPIKPEQMEQLSVEVHGGASVAGIGPTPVRNGLGSSSSAGSLYSATHTKLAPTQSDPINLKYEPDTSATGSFSAGANVNSPLLTRNKSATLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHAPPAPALYGNFNGGSLHHSVIYRPITVAENAAAGASANGSAGVNCSAEAQNLSMDSKVSPLNIGLEGLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPEQQGVAAAVAAAAVAAASQQQPHGRLGAQMSHGLTAQQQQQHAMNGLAGCLGGGTTQATIKSEQCEESSASARPTNIPLLLQEIMDVEHLWQYNEAELARLNQPISTSSSSSSNASSTSSSSAVNGGVGGGTTNPQMTNPLLASAGFGNGENTNPDLIAHLCNVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCYRSIDTPGEIKMSQGKKISLAQAKSSGLQACIERMLNLTENLRRLRVDRYEYVAMKVIVLLQSDTTELHEPVKVRECQEKALQALQAYTLAHYPDTPSKFGELLLRIPDLQKTCQLGKEMLTIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00082980;
- 90% Identity
- iTF_01045537;
- 80% Identity
- iTF_01045537;