Nasi009195.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- KLHL2
- Assembly
- GCA_030068015.2
- Location
- CM061526.1:87855673-87857266[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.9 6.4e+03 -2.8 0.0 23 39 111 127 109 132 0.70 2 4 5.4e-15 8.9e-12 44.8 0.0 2 44 338 380 337 381 0.94 3 4 0.0038 6.3 6.8 0.0 23 37 406 420 396 426 0.83 4 4 2e-17 3.2e-14 52.6 0.0 3 41 448 486 446 488 0.92
Sequence Information
- Coding Sequence
- ATGAATCATTTGAAATGGATGGGTCATTCGGCAACAATATTTGATATTCAAAGAAATCTTCGAAATGATCCACAAAGCTGCGAGGTGACGCTAGTAGCCAAAGATCACTCAGTGCGAGCTCACAGGTTTGTACTATCATCATGTTCGGATTTGCTACGAAATTTGCTGGTAGACGTACCAATGGGGCAGGAAGCTACAATTGTTGTGCCGGACATAAAAGGGTCTCTGTTGGAAAGTGTATTGGCATTTATATACATTGGTGAAACAAGTCTCACATCAACTAATTTGTCTGAGTTCTTAGAGGCAATAAATACCTTGGGTATCAAATCGGCAATTAGTTTTGAATGCAATAATGCTACATTATCTAGTGCGGTACAAGCAACTGTTCCAATTAAAACATTAAGTAATATACAAATTGCCCAAGAAGAACTAATTGAACAGCAAGAAAATATCGCCGTAGAGAAAATTGAGacacaACACGTAATACAACATGAAAGAGAATTAGAATTTTTGGATGTTTACAATGAAACTCAGCACAGTAAGATCACCTACTCTATAGAGCATATGCCGGTTGCCAATACTGCAAATGAGTATATTTTGACTGAAAATTCTGGGACATTTACTTTGACgcaaaataaacttgaaaatgCTTCTAATTCGGATACAGAAAAGTTGGTTGAAATGGAAGATACCACCGAAGATGGCCACATCATAGAAGAGTATAGCAATAACAGCTCTGATCCTATTATTGAAATATCAGCAAGTACTTCAGCCACTAGCACTCCAAAAGTAACTGCCACTACAACGTCAAGTTCTCAAGTGCCACAAccaattatacaaattaaaccAACCAAcccaaaaatgaaaacaatcaaAATCAAATCCCAATCCTCTGCTGAAACTGAAGAAATAAACCAACCAATGTTTACAACTATTGACCCAACCACCGACCCAATTTCAGTGTTAAAGACTGAGGATACATTTGCAGCATTGAATGCACCTGGAACACCAGAGGATTCACTATATTATGCCGTACAGGCGGTAATCAACGAAGGCATGAGTTTGCAGAAGGCCGCCTTAAAGTATGATCTTTCAAAAACCGTTCTTTGGCGAAGAGTACGcaaacatccaaattatatGAAAACCACTAGAGAGAATCCTGTTCTAACAATGGCCTATGAACGCTTAAAGGGAGGCGACTCCTTAAAGAATATCAGTCGTGAATTGGATATACCCATGTCAACACTCCATAGACATAAAGTTCGTTTAGCGCAACAAGGTCGATTGCCGGATTATGTTTCCTTTAAAAAACGTGATGTCAATTCGAAAATACAACTAAAAGACAAACTAACTAAAGCGCTACATGCTTGCGTTCACGAAGGAATGTCACAGAATCATGCTGccaatttattcaatataccGAAGAGCACACTGTGGCGTCATTTGCAAAAACGGGTAGCAGAGGCAGAACTTTCACAGAAACTTGAGCAAGGCCAGATTAAGGAGGAAGTAATATTATCATAA
- Protein Sequence
- MNHLKWMGHSATIFDIQRNLRNDPQSCEVTLVAKDHSVRAHRFVLSSCSDLLRNLLVDVPMGQEATIVVPDIKGSLLESVLAFIYIGETSLTSTNLSEFLEAINTLGIKSAISFECNNATLSSAVQATVPIKTLSNIQIAQEELIEQQENIAVEKIETQHVIQHERELEFLDVYNETQHSKITYSIEHMPVANTANEYILTENSGTFTLTQNKLENASNSDTEKLVEMEDTTEDGHIIEEYSNNSSDPIIEISASTSATSTPKVTATTTSSSQVPQPIIQIKPTNPKMKTIKIKSQSSAETEEINQPMFTTIDPTTDPISVLKTEDTFAALNAPGTPEDSLYYAVQAVINEGMSLQKAALKYDLSKTVLWRRVRKHPNYMKTTRENPVLTMAYERLKGGDSLKNISRELDIPMSTLHRHKVRLAQQGRLPDYVSFKKRDVNSKIQLKDKLTKALHACVHEGMSQNHAANLFNIPKSTLWRHLQKRVAEAELSQKLEQGQIKEEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357850;
- 90% Identity
- iTF_00303738;
- 80% Identity
- iTF_01045602;