Nasi010026.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- dl
- Assembly
- GCA_030068015.2
- Location
- CM061527.1:15679733-15681208[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1 6.4e+03 -2.8 0.3 119 135 28 41 16 73 0.52 2 3 8.2e-70 2.5e-66 223.1 0.1 1 169 78 247 78 247 0.99 3 3 3.2 9.7e+03 -3.4 0.1 98 131 398 432 388 437 0.61
Sequence Information
- Coding Sequence
- ATGTATCCCCATCATAGGGCCGTCAACAACTGTGAATGGCCAAACGCGAATACAAATGAAGAGCggatacaacaacaattttatcaacaacaaacacaatacCAACAAAAATCGGAATATGACAATCATAACAATGTGGTTAAAATGGAGCAAGAACATACAGACATACCACAATCTGCATCATCTAATAAACGATCACATATGAGAGAGCTAATCATAAAAACCGCATATGTCCGAATTGTGGAGCAACCCGCCAGCAAAGCATTGAGATTTCGTTACGAATGTGAGGGCCGCTATACTGGTACACTGCTGGGACAGAGTTCCACATCGAAATTGAAAACCTACCCCACCATCGAAATTGTTGGTTATAAAGGACGCGCAATTGTAGTGGTCTCCTGTGTGACCAAGGATGCGCCATATCGCCCACATCCGCACAATTTGGTGGGTAAAGAAAGTTGCAAGAAAGGTGTTTGCACTATGGAAGTCAATCGTGACACAATGCGTGCAGTATTCAACAATTTCGGCATACAGTGTGCTAAAAAGCGTGATGTGGAAAGTTCTTTGAAGGCACGTGAAGATATACGCGTTGATCCGTTTAAGACGGGATTTTCACACCGTTCCAATGCAGCAAGCATAGATCTCAGCTGTGTGCGCTTGTGTTTTCAAGTATTTCTGGAAGATGAAATGCGACGCTTCACAATACCACTATCGCCCGTCGTTTCCGAGCCTATATACGATAAGAAATCTTCGCCTGATCTTACAATTATACACATTTGTAGTTGTTCTGCCAGTGTTTTAGGCAATACTGATATTATTTTGATGtgtgagaaaattttaaaaaacgatATTGCCGTACGATTTTTCGAAGAGAAGGGCGATATTACACTGTGGCAGGCGTTTGGTGCATTCGAGCCGAGTAAAGATGTACACAAGCAGACGGCTATTGCATTTAGAACACCCAAATATCATAAAACAGATATAACGGAACCCGTTCAAGTATATATCCAACTGCAACGACCATCAGATGGTGCTGTTAGTGagcccatcaaatttgaatatgtGCCGGCCGAGTTGGGATCAGACGAGTTAAAGCGAAAACGTCGGAAACTCAATAATGAGAGGTTACGAAAACTCCAAGCGGGACAATGTGGTACTAATTTTGCTAGTCAAATGACAAGTTCCAGCACATACATCAGATGTCAAAAGGCGTCTGACATTAAAATGGAATCTTCCTCACAGCTTTCACAACCCCATCAAGCACGATACCCACGGCAGTTTCAACaaacacagcagcagcagcaaatacCGCAGCCACTTTGCAACAACAGTTTATCAGCGGCTGTTAGTGAATCAGGTCCAACGGCGAGCGAACTATTGGACTTAGATAGTGGGCAACTAGTGCAGGTGGACTCAGAGGAACAATACCTGCTACAGCTCACAACCGAGGAACTTAGGCTCTCTAATCTTTCCCTATAA
- Protein Sequence
- MYPHHRAVNNCEWPNANTNEERIQQQFYQQQTQYQQKSEYDNHNNVVKMEQEHTDIPQSASSNKRSHMRELIIKTAYVRIVEQPASKALRFRYECEGRYTGTLLGQSSTSKLKTYPTIEIVGYKGRAIVVVSCVTKDAPYRPHPHNLVGKESCKKGVCTMEVNRDTMRAVFNNFGIQCAKKRDVESSLKAREDIRVDPFKTGFSHRSNAASIDLSCVRLCFQVFLEDEMRRFTIPLSPVVSEPIYDKKSSPDLTIIHICSCSASVLGNTDIILMCEKILKNDIAVRFFEEKGDITLWQAFGAFEPSKDVHKQTAIAFRTPKYHKTDITEPVQVYIQLQRPSDGAVSEPIKFEYVPAELGSDELKRKRRKLNNERLRKLQAGQCGTNFASQMTSSSTYIRCQKASDIKMESSSQLSQPHQARYPRQFQQTQQQQQIPQPLCNNSLSAAVSESGPTASELLDLDSGQLVQVDSEEQYLLQLTTEELRLSNLSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -