Npan072499.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nemotelus pantherinus
Gene Symbol
ZNF219
Assembly
GCA_963978885.1
Location
OZ022266.1:65634930-65644648[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0085 2.3 11.0 2.7 1 23 106 128 106 128 0.97
2 20 4.1e-05 0.011 18.3 0.2 1 21 134 154 134 155 0.94
3 20 1.2e-07 3.1e-05 26.3 0.7 1 23 166 188 166 188 0.99
4 20 7.8e-07 0.00021 23.7 2.7 1 23 194 216 194 216 0.99
5 20 0.004 1.1 12.0 2.3 1 23 222 244 222 244 0.97
6 20 1 2.7e+02 4.4 1.0 1 20 251 270 251 272 0.89
7 20 0.096 26 7.7 1.3 1 22 294 316 294 318 0.90
8 20 7.4e-05 0.02 17.5 3.6 1 23 324 346 324 346 0.97
9 20 0.00013 0.035 16.7 2.5 1 23 352 374 352 374 0.98
10 20 0.0012 0.32 13.7 3.7 1 23 387 409 387 409 0.99
11 20 0.00023 0.062 15.9 0.5 1 21 415 435 415 436 0.95
12 20 0.0073 1.9 11.2 3.4 2 23 444 465 444 465 0.97
13 20 0.61 1.6e+02 5.2 1.3 1 19 471 489 471 491 0.81
14 20 0.99 2.6e+02 4.5 0.2 1 21 504 525 504 528 0.88
15 20 2.2e-06 0.00058 22.3 1.7 1 23 535 557 535 557 0.96
16 20 0.089 24 7.8 2.4 1 23 563 585 563 585 0.94
17 20 0.00018 0.048 16.3 5.5 1 23 598 620 598 620 0.97
18 20 1.4e-07 3.7e-05 26.1 0.9 1 23 626 648 626 648 0.99
19 20 0.2 52 6.7 1.5 1 21 674 694 674 695 0.94
20 20 7.2 1.9e+03 1.8 0.0 8 20 715 727 707 729 0.87

Sequence Information

Coding Sequence
ATGAGTGGTTTATGTAACTTGCCTCCTCAATCCAACAGTATTTTATCCATAAAAGAGGAAATTGAAATCGGCGAAAGGCAATTGCAAGAGCAGATTTTCCATGAATGCGAAGTGAAACAGAGTGGTGCTGATCAAAGCGCTAATTTCGGGAAACGGAGTGGAATTATCAATAGTCTATGCGACGATGCCGAAGATGCTCAACCTGGATTAAAGGATTGTGAAATGAAAAGTGGGACGATTAAGGAACAACTCTTTGAGCACAACTTAAGTTCGAAAAATTCTATTAATTCAACTCAAATACTCCGAGAAAAGAATCACACTTGTTCGATTTgtgcaaaaaaatttaggtggcGTTGTGAACTGGAAGCGCATATGATCTCTCATTGTGGTACTCGACCGTATGCATGCACAATATGTCCTAAACGCTTCACCGCTGCCCGTAGCTTAAACAGACACATGTTCACTTGTGGCGATAATGGAAAGTTTCGTTCCAGATACAAATGCACAGTATGTGAAAAATCTTTTTCTCGAAGTGAAGGATTAAACAGTCACATGAATATTCATCGTGGCGAACGTCCTTTCAAGTGTGATATCTGTAACAAGTCGTTTGCGAGGAAAAGCACGCTCTATTCACACAATAGGACACATTCACGTGACAAGAAATTTGAGTGTGCATTGTGCaataaaacattcatttacGCTTCGAATCACCGTAGGCACGAAAAGTTGCACTCCAATGGCCGTTTGAAATATCAATGTGATATATGTAAACATTATTTTTGGTCCGATTATCAGTATCGTAGCCACTTGGAAGGTAATAAGTGTAAAGGAAATCCGCAAGAGTCCAATATGCACACGGTCCGCGCCACAGAAACGCGATTTCAATGTTCTAAGTGTGATCATGAGTCATTCGCAAGCATTGAGCTTCTCAACCGGCACAAAGTTCAAAGTCATCTACCCTCGAAAACTCACTCATGCTCAGTTTGTGGAAAAGCATATACGCATAAATTTCGGCTTGAGATCCATATGAACTCTCATACTGGCAGCCGACCGTATACATGCACAATATGTCCAAAATCGTTCTTCTCGCTCCAAAGCTTATACAAGCACAATAAGTCTCACGATATCTTAAGTGCAAAGGCGGATAACTGTTCCAGGTTCAAATGTACACTCTGTGAAAAGCTTTGTAGTTCAAGGGACCGACTGAATAGTCACATGAATATGCATCGACGCAAACGTCCTTTCAAGTGCGACACCTGTCCCAAAACGTTTATGAGCCCAGATACACTCTCGTCACACAAAAAACTGAATGCAGATGATGGGGTAGGTGAGTGCACGTTATGCAATCAAAAATTTACGGACAGTAATAAGCGGCGGAGGCACGAGAAGACGCACACAAATATCAGCAAATATCAGTGTGCAAAATGTAAAAAGTATTTTAGATTGGAAGATCAGCACCGCAGTCATTTGGAAGATAATAAATGCAAAGGATATGCTTCAGAACAGCTATTTGAATGTTCCAAGTGTGAAAATGAATCATTCATAAGCGTTGAGCTCCTAAATCAGCACAAAGTCGAAGTTCATCCACCcccgaaaaaaaatcatgcatgCTCGATTTGTGAGAAATCATTCAGGTCGAGTTCAAGGCTTAAAGTGCATATGAACGTTCATACCGGCAATCGACCGTATAAGTGCACAGTGTGTCCTAAAAAGTACGGCTGCCCCCAGAGCTTACGCCAGCACAAATTAGATCACAACTTCTTAAGCGCAGATGGGAAGATTCGTGGCAGATTCAAATGTACGCTCTGTGAAAAGTCTTACTACTCAAAAACCAATCTGAATAGTCACATGCATTTTCATCGTGGCGAACGTCCTTACAAATGCGAAATATGTCCCAAGTCGTATACGAGCGCAAAATCACTCAGATCACACATAAAAACGCATTCTGATGAGAGAAAATATGAGTGCAATTTTGATCGCCGTGTGGACGAGAAATCGCATACAAATAGCCGTATGAAATATCGAtgtgaaaaatgtaaaatgtatTTTAGATTGAAGAATCAGTACGGCAGCCATTTGAAAGACAATAAGTGCAAAGGATATGCTCTGGATAAGCCATTTCAATGTTCCAAGGGTGATAATGAATCATTCGCAACCATTGAGAATCTCATTCGACACAAAGCTAAAGATAAGTGCAATAGAAATTGCCAAGAGTCCGATCATATTCGAGAAAATAAGAAGTGTGAAACACAAGTTCGTAGTGAaatcaaaaacattcaaaatgatGAGCAATCACAGAAGAATTATGCGTTCGAGAAGAACAGTGGTTTATCTGTAAAGAAGGAAGTTGAAATCAACGAAATACAATTGCAAGAGCAGATTTTCGATGGAGCCGAAGTGAAGAAAAGTCTGCTTGACCACAGCGCTAATGCCGAGAAACGGAGTGCAATTGTAAATGGACTACGCAACGAAGTAACCCTGTATTTTACGAAGGCGAAGAATCGATCTTAA
Protein Sequence
MSGLCNLPPQSNSILSIKEEIEIGERQLQEQIFHECEVKQSGADQSANFGKRSGIINSLCDDAEDAQPGLKDCEMKSGTIKEQLFEHNLSSKNSINSTQILREKNHTCSICAKKFRWRCELEAHMISHCGTRPYACTICPKRFTAARSLNRHMFTCGDNGKFRSRYKCTVCEKSFSRSEGLNSHMNIHRGERPFKCDICNKSFARKSTLYSHNRTHSRDKKFECALCNKTFIYASNHRRHEKLHSNGRLKYQCDICKHYFWSDYQYRSHLEGNKCKGNPQESNMHTVRATETRFQCSKCDHESFASIELLNRHKVQSHLPSKTHSCSVCGKAYTHKFRLEIHMNSHTGSRPYTCTICPKSFFSLQSLYKHNKSHDILSAKADNCSRFKCTLCEKLCSSRDRLNSHMNMHRRKRPFKCDTCPKTFMSPDTLSSHKKLNADDGVGECTLCNQKFTDSNKRRRHEKTHTNISKYQCAKCKKYFRLEDQHRSHLEDNKCKGYASEQLFECSKCENESFISVELLNQHKVEVHPPPKKNHACSICEKSFRSSSRLKVHMNVHTGNRPYKCTVCPKKYGCPQSLRQHKLDHNFLSADGKIRGRFKCTLCEKSYYSKTNLNSHMHFHRGERPYKCEICPKSYTSAKSLRSHIKTHSDERKYECNFDRRVDEKSHTNSRMKYRCEKCKMYFRLKNQYGSHLKDNKCKGYALDKPFQCSKGDNESFATIENLIRHKAKDKCNRNCQESDHIRENKKCETQVRSEIKNIQNDEQSQKNYAFEKNSGLSVKKEVEINEIQLQEQIFDGAEVKKSLLDHSANAEKRSAIVNGLRNEVTLYFTKAKNRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01044118;
90% Identity
iTF_01044118;
80% Identity
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