Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: -
Assembly: GCA_963978885.1
Location: OZ022263.1:212671221-212678566[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00012 0.033 16.8 0.2 3 23 175 195 174 195 0.97

2 14 2.4e-06 0.00065 22.1 1.2 1 23 201 223 201 223 0.99

3 14 4.1e-06 0.0011 21.4 2.6 1 23 229 251 229 251 0.98

4 14 6.9e-05 0.018 17.6 1.5 1 23 261 283 261 283 0.99

5 14 2.2e-06 0.00059 22.3 1.4 1 23 289 311 289 311 0.98

6 14 1.7e-05 0.0046 19.5 0.8 1 23 318 340 318 340 0.98

7 14 1.1e-05 0.0029 20.1 1.1 1 23 346 368 346 368 0.97

8 14 9.4e-05 0.025 17.2 0.7 1 23 375 397 375 397 0.99

9 14 3.2e-06 0.00085 21.8 1.2 1 23 403 425 403 425 0.98

10 14 1.3e-05 0.0034 19.9 0.5 1 23 432 454 432 454 0.99

11 14 4.3e-06 0.0011 21.4 2.3 1 23 460 482 460 482 0.98

12 14 0.00046 0.12 15.0 0.3 1 20 488 507 488 510 0.93

13 14 1.3e-05 0.0034 19.9 1.1 2 23 517 538 516 538 0.97

14 14 3.3e-06 0.00087 21.7 1.5 1 23 544 567 544 567 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00012	0.033	16.8	0.2	3	23	175	195	174	195	0.97
2	14	2.4e-06	0.00065	22.1	1.2	1	23	201	223	201	223	0.99
3	14	4.1e-06	0.0011	21.4	2.6	1	23	229	251	229	251	0.98
4	14	6.9e-05	0.018	17.6	1.5	1	23	261	283	261	283	0.99
5	14	2.2e-06	0.00059	22.3	1.4	1	23	289	311	289	311	0.98
6	14	1.7e-05	0.0046	19.5	0.8	1	23	318	340	318	340	0.98
7	14	1.1e-05	0.0029	20.1	1.1	1	23	346	368	346	368	0.97
8	14	9.4e-05	0.025	17.2	0.7	1	23	375	397	375	397	0.99
9	14	3.2e-06	0.00085	21.8	1.2	1	23	403	425	403	425	0.98
10	14	1.3e-05	0.0034	19.9	0.5	1	23	432	454	432	454	0.99
11	14	4.3e-06	0.0011	21.4	2.3	1	23	460	482	460	482	0.98
12	14	0.00046	0.12	15.0	0.3	1	20	488	507	488	510	0.93
13	14	1.3e-05	0.0034	19.9	1.1	2	23	517	538	516	538	0.97
14	14	3.3e-06	0.00087	21.7	1.5	1	23	544	567	544	567	0.97

Sequence Information

Coding Sequence: ATGTTCGAGCAGCAAATCAAATCCGAGCCGATGTCCTTTTATTCAACATGCCCGCCACCACCACAAATGGCCCAGCAAATGCAAGCTAGGACAGATAATAATGCACAACAACCCCAAtcgcaacaacaacagcagcagcaacaacagcagcagcatcaTCAGCAACATCAACAAtcacagcagcagcaacaacaacaacagcagcaacaacaacagcagcaacaacaacaatcccAACACCAACAACAATCGGTGATTGCAATGATCGACAATAAAAGTAACGTGATTCATCCGCAAATATTGATTAGCAATGCCGCCGCCGGCTTACAAGATTGGCGACCAAGACTTCCAGATAATGATCAGACCAGTGATGAGGTCCAACAGTCAACAACCCCATTGTCTAACGTATCGGATGGTACAAAGCAAGAGCTTCAAGCAGGTCCTCATGGAATTCCAATTACTATCACTACTCAGCCAACAACCAATAGTACCACTAGCAGTTCAAGGAGCAAACCACAGGCTTGCAAAGTGTGCGGGAAGATGCTGTCATCAGCGAGCAGTTATTATGTTCACATGAAGCTGCATTCGGGGACGAAACCGTTTCAATGCACGGTTTGTGAAGCTGCATTTTGTCGGAAACCATACTTAGAAGTTCATATGCGCACCCATACTGGAGAACGCCCATTTCAATGTGACTTATGTCTAAAGCGATTTAGTCAAAAATCATCTTTGAACACCCACAAACGAATACATACAGGTTATTGGAGCATGCACAAACCGTTCCAGTGCACACAATGCAGTGCTGCATTCTGCCGGAAACCATATCTAGATATTCATATGAGAATTCATACGGGCGAGAGACCATTCGAATGTGATATCTGTTTGAAACGATTTACGCAAAAatcaacattaaatattcataagAGAATTCATACGGttcaggAACGACCATTCCATTGCGAACAATGTCCGGCAGCATTTTCCCGAAAACCCTATCTCGATATTCATATGCGAACCCATACGGGCGAACGACCGTTTGAATGCGACATCTGTCTCAAGAGATTCACGCAAAAGTCTTCACTAAATATACACAAAACTATACACACAGTAGGGATTCGACCATTTCAATGTGCGTTATGCCCGGCTGCGTTCTGCAGGAAGCCATACCTTGATATACATCAGCGCACGCATACCGGAGAACGTCCTTTTGAATGTGACATTTGTTTGAAACGGTTTTCACAGCGGTCCACGTTAAATATACACAAAAGAATTCATACAGTGCAAGGACGTCCGTTCCAGTGCGATCAGTGTCCGGCGGCTTTCTACCGGAAGACGTATCTCGATATTCATATGCGGATGCATACGGGCGAAAAGCCTTTTCAGTGTGATATGTGCTTGAAGCGATTCACTCAAAAgtcaacattaaatattcacaaAAGAATTCATACAGGTGAACGCCCCTATGCTTGTGATATATGTAACAAGACATTTGCTGTCAAGAGCTATGTTACTGCTCATAGaTGGTCACATGTTTCTGAAAAACCACTTAGCTGTGATCGATGTTCGATGACGTTTACGAGCAAATCGCAATTCGCAATTCACATAAGGACACACTCGACGGGGCCGAACTTCGAGTGCAACGTCTGTGGACGAACATTTATTCGTGATAGTTATTTAATACGTCATCATAATCGAGTTCACCGAGATAATAGAATCACAGCAAATAGTATAGCGACCATAAACAGTGTAGCAACTGGTGAGGTTGGTGGCTCGAATAGTACTCCGGAACCGAATGATGTTTATGAATCAAGCAATTCGCAAGTCTGTGACTTAAGATATGTTTCAGACCTGCAAATGAGTGCATCGCCAGCTGTATCGCAAATGTCCTCTCCGGGTGTAGGAAGTGATAGTCGACTTATGAACGATAGACCAGAGTCATTAACGATGAGCAGTCAGGATGGAACTAGGAATGCAATAAGTGAGCTTGAATAA
Protein Sequence: MFEQQIKSEPMSFYSTCPPPPQMAQQMQARTDNNAQQPQSQQQQQQQQQQQHHQQHQQSQQQQQQQQQQQQQQQQQQSQHQQQSVIAMIDNKSNVIHPQILISNAAAGLQDWRPRLPDNDQTSDEVQQSTTPLSNVSDGTKQELQAGPHGIPITITTQPTTNSTTSSSRSKPQACKVCGKMLSSASSYYVHMKLHSGTKPFQCTVCEAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFSQKSSLNTHKRIHTGYWSMHKPFQCTQCSAAFCRKPYLDIHMRIHTGERPFECDICLKRFTQKSTLNIHKRIHTVQERPFHCEQCPAAFSRKPYLDIHMRTHTGERPFECDICLKRFTQKSSLNIHKTIHTVGIRPFQCALCPAAFCRKPYLDIHQRTHTGERPFECDICLKRFSQRSTLNIHKRIHTVQGRPFQCDQCPAAFYRKTYLDIHMRMHTGEKPFQCDMCLKRFTQKSTLNIHKRIHTGERPYACDICNKTFAVKSYVTAHRWSHVSEKPLSCDRCSMTFTSKSQFAIHIRTHSTGPNFECNVCGRTFIRDSYLIRHHNRVHRDNRITANSIATINSVATGEVGGSNSTPEPNDVYESSNSQVCDLRYVSDLQMSASPAVSQMSSPGVGSDSRLMNDRPESLTMSSQDGTRNAISELE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00793690;
90% Identity: iTF_01127714;
80% Identity: -