Hill011281.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hermetia illucens
Gene Symbol
-
Assembly
GCA_905115235.1
Location
NC:112657255-112740344[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00012 0.0064 16.5 0.2 3 23 167 187 166 187 0.97
2 15 2.3e-06 0.00013 21.9 1.2 1 23 193 215 193 215 0.99
3 15 4e-06 0.00022 21.1 2.6 1 23 221 243 221 243 0.98
4 15 6.6e-05 0.0036 17.3 1.5 1 23 253 275 253 275 0.99
5 15 3.8e-06 0.00021 21.2 1.4 1 23 281 303 281 303 0.98
6 15 3.3e-06 0.00018 21.4 0.2 1 23 310 332 310 332 0.99
7 15 1.9e-05 0.001 19.0 1.1 1 23 338 360 338 360 0.97
8 15 9e-05 0.0049 16.9 0.7 1 23 367 389 367 389 0.99
9 15 6.3e-07 3.5e-05 23.6 1.4 1 23 395 417 395 417 0.98
10 15 3.9e-05 0.0021 18.0 3.7 1 23 423 445 423 445 0.98
11 15 1.2e-05 0.00067 19.6 0.5 1 23 453 475 453 475 0.99
12 15 4.1e-06 0.00022 21.1 2.3 1 23 481 503 481 503 0.98
13 15 0.00044 0.024 14.7 0.3 1 20 509 528 509 531 0.93
14 15 1.2e-05 0.00068 19.6 1.1 2 23 538 559 537 559 0.97
15 15 3.1e-06 0.00017 21.5 1.5 1 23 565 588 565 588 0.97

Sequence Information

Coding Sequence
ATGCCCGTACCCCCGACAAGTGATCTGCTTGCTACGATCAGCATGTTCGAGCAGCAAATCAAATCCGAGCCGATGTCCTTTTATTCGGCATGTCCACCACCACCACAAATGGCCCAACAAATGCAAGCACGGGCGGATAATACTACACAACAGCCTCAACCCCAACAACACtcacaacatcaacaacaaccgcaacagcaacaacaacaaccacaaCACCAACAGCAATCGGTTATTGCTATGATCGACAATAAAAGTAATGTGATACATCCACAAATATTAATCAATAATTCAACTGGCATGCAAGATTGGCGGACAAGGCTTCCAGAGAATGACCAAACAAGCGATGAGGCCCAACAGTCCAGTACATCATTGTCCACAGTATCCGATGGTACAAAGCAAGATATTCAAACAAATTCCCATGGAATTCCAATTAGTATCTCGACTCAGCCAACTACGAACAGCACCACTAGCAGTTCAAGGAGCAAGCCGCAAGCATGTAAAGTGTGTGGAAAGATGTTATCTTCTGCCAGTAGCTACTACGTTCATATGAAGCTACATTCAGGGACAAAACCATTTCAATGCACGGTTTGTGAAGCTGCTTTTTGTCGAAAACCATATTTGGAAGTTCATATGAGAACGCACACAGGCGAACGGCCCTTCCAGTGTGATTTATGTCTGAAGCGATTCAGCCAGAAATCATCTCTAAATACACACAAAAGAATACACACAGGTTATTGGAGCATGCACAAACCGTTCCAGTGCACGCAATGCAGTGCtgcattctgtcggaaaccatATCTTGATATCCATATGAGAATTCATACAGGCGAGAGACCATTCGAATGTGATGTTTGTTTGAAAAGATTTACGCAAAAATCTACATTGAATATACATAAGAGAATTCATACGGTTCAGGAACGACCATTCCAGTGTGAACAATGTCCGGCAGCATTTTCCCGAAAGCCCTATCTTGATATTCATATGCGAACTCATACGGGTGAGCGGCCTTTTGAATGTGATGTCTGTCTGAAGAGATTCACGCAAAAGTCTTCACTAAATATACATAAAACTATACACACAGTAGGGATTCGACCATTTCAATGCGCTTTATGCCCGGCCGCGTTCTGCAGGAAGCCATATCTCGATATACATCAGCGTACGCATACCGGAGAGCGTCCTTTTGAATGCGAAATTTGTTCGAAAAGGTTCTCACAGAGGTCCACATTAAATATACACAAAAGAATTCATACAGGTCATAGACCTTTCCAGTGCACAACATGCCTAAAGAGTTTCTCGCAGAAGTGCGCTTTAAATTTGCATATGCTCAGTCATACATCCGTGCAAGGACGTCCGTTCCAGTGCGATCAATGTCCTGCGGCTTTCTATCGGAAGACGTACCTCGATATTCATATGCGGATGCATACAGGCGAGAAGCCTTTTCAATGTGATATGTGTTTAAAAAGATTCACACAAAAATCAACATTAAATATTCACAAAAGAATCCATACAGGTGAACGACCCTATGCTTGTGATATATGTAATAAAACATTTGCTGTTAAAAGCTATGTTACTGCACATAGatgGTCGCATGTATCTGAAAAGCCGCTTAGCTGTGATCGATGTTCGATGACTTTTACAAGTAAGTCCCAGTTCGCTATTCACATAAGGACACATTCAGCTGGACAGAATTTTGAGTGCAATGTTTGCGGTAGAACCTTCATTCGTGATAGTTATTTAATACGCCATCATAATCGAGTGCATCGGGACAATAGGATAACCGCGAATAGCATAGCCACCATAAATAGTGTAGCGACCGGAGAAGTAGGTGGCTCAAATAATACTCCAGAACCTAATGATGTTTACGAATCGAGCAATTCTCAAGTCTGTGACTTAAGGTATGTGTCAGATTTGCAGATGAGCGCCTCACCGGCAGTTTCACAGATGTCGTCCCCTGGTGTAGGAAGTGATAGTCGACTTATGAATGACAGGCCTGAATCTTTAACTATGAACAGTCAGGATGGGACTAGAAATGCAATAAGTATGAATGAAGCCAACGGTTTGAGTATGAATGAACGCTTAATTCACGATAGATCTACGTTGCAAACGCGTACAATTCATGAACAACGTGCCATTCAGGAGCGCGCTTTGCAGGAGCGTGCTATTCAAGAACAACGCGTTCTACAGGAGAGGGCAATTCAAGAGCGGGCTCTTCAAGAACGCGCCCTCCAGGAACGTGCCTTGCAAGAACGCGTCCTGCAGGAACGTGTCATGCAAGAACGAGGCCTCCATGCCCCGCTCGTTATCCAGCAAGGTCATGTTATGCAGCAGCACGACGGTCGATTAGATCAAAAGGTTATGGGCGGTACGATCGCAAGTCCTGGTCCAGTCTGA
Protein Sequence
MPVPPTSDLLATISMFEQQIKSEPMSFYSACPPPPQMAQQMQARADNTTQQPQPQQHSQHQQQPQQQQQQPQHQQQSVIAMIDNKSNVIHPQILINNSTGMQDWRTRLPENDQTSDEAQQSSTSLSTVSDGTKQDIQTNSHGIPISISTQPTTNSTTSSSRSKPQACKVCGKMLSSASSYYVHMKLHSGTKPFQCTVCEAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFSQKSSLNTHKRIHTGYWSMHKPFQCTQCSAAFCRKPYLDIHMRIHTGERPFECDVCLKRFTQKSTLNIHKRIHTVQERPFQCEQCPAAFSRKPYLDIHMRTHTGERPFECDVCLKRFTQKSSLNIHKTIHTVGIRPFQCALCPAAFCRKPYLDIHQRTHTGERPFECEICSKRFSQRSTLNIHKRIHTGHRPFQCTTCLKSFSQKCALNLHMLSHTSVQGRPFQCDQCPAAFYRKTYLDIHMRMHTGEKPFQCDMCLKRFTQKSTLNIHKRIHTGERPYACDICNKTFAVKSYVTAHRWSHVSEKPLSCDRCSMTFTSKSQFAIHIRTHSAGQNFECNVCGRTFIRDSYLIRHHNRVHRDNRITANSIATINSVATGEVGGSNNTPEPNDVYESSNSQVCDLRYVSDLQMSASPAVSQMSSPGVGSDSRLMNDRPESLTMNSQDGTRNAISMNEANGLSMNERLIHDRSTLQTRTIHEQRAIQERALQERAIQEQRVLQERAIQERALQERALQERALQERVLQERVMQERGLHAPLVIQQGHVMQQHDGRLDQKVMGGTIASPGPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01127714; iTF_01044103;
90% Identity
-
80% Identity
-