Basic Information

Insect: Nemotelus pantherinus
Gene Symbol: -
Assembly: GCA_963978885.1
Location: OZ022266.1:85946565-85950700[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.2e-05 0.011 18.3 2.9 1 23 420 442 420 442 0.98

2 18 1.1e-05 0.0028 20.1 0.4 1 23 448 470 448 470 0.97

3 18 5.7e-05 0.015 17.8 1.7 1 23 476 498 476 498 0.98

4 18 8.4e-05 0.022 17.3 3.4 1 23 504 526 504 526 0.97

5 18 0.00026 0.069 15.8 4.9 1 23 532 554 532 554 0.98

6 18 9.4e-05 0.025 17.2 5.7 1 23 560 582 560 582 0.97

7 18 4.4e-07 0.00012 24.5 4.3 1 23 588 610 588 610 0.98

8 18 1.6e-07 4.4e-05 25.8 2.4 1 23 616 638 616 638 0.97

9 18 0.00022 0.059 16.0 5.7 1 23 644 666 644 666 0.97

10 18 8.8e-05 0.023 17.2 6.4 1 23 672 694 672 694 0.98

11 18 2.4e-05 0.0063 19.0 4.7 1 23 700 722 700 722 0.98

12 18 1.7e-05 0.0046 19.5 7.1 1 23 728 750 728 750 0.98

13 18 1.2e-06 0.00033 23.1 7.2 1 23 756 778 756 778 0.98

14 18 0.002 0.53 13.0 10.1 1 23 784 806 784 806 0.97

15 18 0.00031 0.082 15.5 9.5 1 23 812 835 812 835 0.95

16 18 0.00015 0.041 16.5 0.4 1 23 841 863 841 863 0.97

17 18 0.0016 0.42 13.3 3.3 1 23 873 895 873 895 0.98

18 18 1.7e-05 0.0045 19.5 1.1 1 23 901 924 901 924 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.2e-05	0.011	18.3	2.9	1	23	420	442	420	442	0.98
2	18	1.1e-05	0.0028	20.1	0.4	1	23	448	470	448	470	0.97
3	18	5.7e-05	0.015	17.8	1.7	1	23	476	498	476	498	0.98
4	18	8.4e-05	0.022	17.3	3.4	1	23	504	526	504	526	0.97
5	18	0.00026	0.069	15.8	4.9	1	23	532	554	532	554	0.98
6	18	9.4e-05	0.025	17.2	5.7	1	23	560	582	560	582	0.97
7	18	4.4e-07	0.00012	24.5	4.3	1	23	588	610	588	610	0.98
8	18	1.6e-07	4.4e-05	25.8	2.4	1	23	616	638	616	638	0.97
9	18	0.00022	0.059	16.0	5.7	1	23	644	666	644	666	0.97
10	18	8.8e-05	0.023	17.2	6.4	1	23	672	694	672	694	0.98
11	18	2.4e-05	0.0063	19.0	4.7	1	23	700	722	700	722	0.98
12	18	1.7e-05	0.0046	19.5	7.1	1	23	728	750	728	750	0.98
13	18	1.2e-06	0.00033	23.1	7.2	1	23	756	778	756	778	0.98
14	18	0.002	0.53	13.0	10.1	1	23	784	806	784	806	0.97
15	18	0.00031	0.082	15.5	9.5	1	23	812	835	812	835	0.95
16	18	0.00015	0.041	16.5	0.4	1	23	841	863	841	863	0.97
17	18	0.0016	0.42	13.3	3.3	1	23	873	895	873	895	0.98
18	18	1.7e-05	0.0045	19.5	1.1	1	23	901	924	901	924	0.96

Sequence Information

Coding Sequence: ATGAATACGGTTGATCGTTCGGTTGCCCACGAGAACCCAGGGGCGGATTCTCAGATTAGACAGTCGCCATCGCAGCCACAGCAGGCGCATccacagcagcagcagcaacaccCTCAACATCCTCGACATTTGCATCAGCAGCATATCGAGGAGCAAAATCGacagcaacagcagcagcagcaaaaCCAACATCAGGCGCAGAGTGGCAGTCATCAAGAGCAACAACGAATTGGAGGAGTTATACAACCGGTGAGCGAAGCGGAGATCAAACATCCTTTACCTTTGGCCAATGCGCCTCATCTTGGCAAATACTGGGTTGTCACGAATCTTTTCCAAGGACCCGGACAGAATACTACCTACAATGTGGCGGCGGCACAGCCAACTTCGTCATCGGGCGGCGTGGTCATCCCAACTGCACAGCCTATTCAAACCCATACGACAATCAAGTCGGACGGTATTAAGCAAGAAGAGGCAAATCTTCACCAACACCAACGACAGCATTTGCAGCAGCAAATCGTCACGGTCAGTGCGCCAAACACTATTCAAATACCCAACTCAATGATCGTGACACAACAAGGATCGCAGCAATTAACAAACGCCGCACTAATTCAAACCGGCCAACAAGCTGAGCATATTCAGGTCGCTGTGAATCCCGAGAGCAGTATTATGATAATGGACACATCCGGTAAGAGCGAAAAGATTGTTACGAACCAGAACATGGGCAGCGGTGAGCCGATGCAAGGAGTGGACCGTGTAAAGGAGGAGAAGCCTTTTATCAACTGCAAAATGTTACCGCAACAACAAATGCACGGCCACCAATTAACGGACCAGAAGATGCACATACCGCACTTGTTGGACGTGCGAAATGCCGATGGGTCCTTGATCAAAATACAGTCCCAAGACCAAGAGATGGGCAAGCCGCTGGGCGTAGAGATGTATAAAGTAAACATTGAAGACTTGAGTCAGTTCCTCTCATATCACGAAGTGTTCGGGAAACTGCACGGAGGTGATGTGATCACTCATCCTATATCGCATTCGGGCACTCATGTCGTGAACACAATAAGTAATGTTCCAGCGGCGGTGAAAACGTCGACAGCGTCGAATGTAGTAACCTCAGGGGCGAATATCGCAACATCGACTGGAGAGTTGTTGATGCCAAAGATGGAAAACATTACGCCCATGCCCGGGGTGAGTCAAGTTCCTGGCGCAACAGCGACTCTGACCAATGCTGACGGGACCACAATAACGCCTGCCACGCATACCTGCGACATTTGTGGCAAAATGTTCCAATTTCGTTACCAATTAATCGTGCACAGACGATACCACAGCGAACGGAAGCCGTTCATGTGCCAGGTTTGCGGACAGGGCTTTACAACATCACAGGATCTAACTCGACATGGAAAAATCCATATTGGTGGACCGATGTTCACGTGCAACGTATGCTTCCACGTATTCGCGAACGACGCAAGCTTGGAACGTCACATGAAGCGTCATTCGGCTGATAAGCCGTTTGCCTGCACCCTTTGCCAGAAAACCTTTGCGCGAAAAGAACATCTTGATAATCATTTTCGCAGTCACACTGGCGAGACACCGTTCCGTTGCCAGTTCTGTGCCAAGACGTTCACGCGCAAAGAACATATGGTAAATCATGTGAGAAAACACACTGGTGAAACTCCGCATCGTTGCGATATCTGTAAAAAGTCGTTTACACGGAAAGAGCATTACGTCAATCACTATATGTGGCATACTGGCGAGACACCGCATCAATGTGAGGTTTGTGGCAAGAAGTATACGCGGAAAGAGCATCTGGCAAACCATATGCGATCCCATACCAATGACACTCCATTCCGTTGCGAGATTTGTGGCAAGAGCTTCAGTCGGAAGGAGCATTTCACAAATCACATTTTGTGGCATACAGGAGAAACACCCCATCGCTGTGATTTCTGCGCCAAAACGTTTACTCGAAAAGAGCATTTGCTTAATCATGTTCGACAACATACAGGCGAGTCGCCTCATCGATGCACTTATTGTCTCAAGACTTTCACACGCAAGGAACACCTGGTCAATCACGTGCGCCAACATACTGGTGAGACGCCGTTCAAATGCACTTTCTGCACTAAGGCCTTTACTCGGAAAGATCACATGGTCAATCATATTAGACAACATACCGGTGAGTCGCCGCACAAGTGCACCTACTGCACGAAAACTTTCACAAGAAAAGAACATTTGGTAAATCATGTCAGGCAGCATACTGGCGAATCGCCACATCGATGCTCTTACTGTAACAAAACGTTCACACGTAAGGAGCATTTGACTAATCATATTCGTTTGCATACGGGCGATTCGCCGCATAAATGCGAATGTTGCCAGAAGACGTTCACGCGCAAAGAACACTTGAATAATCACATGAAACAGCATTCAAGCGACAATGCTCATTGTTGCAATGTATGCAACAAGCCGTTCACGCGTAAAGAACATCTCATCAATCATATGTCACGCTGTCATACCGGTGATAGGCCGTTTGCTTGCGAAACTTGTGGAAAGTCTTTTCCGTTGAAAGGAAATCTGATCTTTCATCAACGAAGCCACACCAAGGGACAAGATGTCGAACGACCATTCCGTTGTGAAAAATGTCCGAAAGACTTCATATGTAAAGGGCATTTGGTATCGCATATGCGAGCTCATTCGGGAGAGAAGCCCCATATATGTGCGCTGTGTAGTAAAGCCTTCGTAGAGAAAGGCAATTTGAAGCGTCACATGAAGATGAATCATCCAAATGTGATCATTCCGCCGCTGGGGCTTGTTACAAACATAAAAACAGAGGCGAACCCTACAACCGTCACGACCGTGGTCTCGCAATACAACACGATCAAGACGGAAACGAATCCTACTACGATGGCCACAGCTCCCCAGTACATGAACGAACGGATTCAACTACTTAAAGCAAATCTACTACCCATTAACCCTCTGATACCACATCAAGCACCTACAATGCATACAATACAGCAAATAACTGCAACGTCGGCCAATTCGACAACTGGACTTGTGCCTATCGTCACTTCCACGATAACTTCACATGGAAAtcaacagcaacagcagcagcaacaacaacacgTCCAGATGCAGCAGCAGTCGCAACAGCAACAACATCCACCACCGCAACAGCAACAGCCAAACAACCAGCAGCCCGGAGATCCGACACAAACTGTCCCAATCGCAATCATTCAGGCTGGTGATCCAGCGACCATTACACGGGCTTCCATTCAGTTGCAGCATTTGCCACCGGGTGTTGATCACTCGGTAGTTTACTAA
Protein Sequence: MNTVDRSVAHENPGADSQIRQSPSQPQQAHPQQQQQHPQHPRHLHQQHIEEQNRQQQQQQQNQHQAQSGSHQEQQRIGGVIQPVSEAEIKHPLPLANAPHLGKYWVVTNLFQGPGQNTTYNVAAAQPTSSSGGVVIPTAQPIQTHTTIKSDGIKQEEANLHQHQRQHLQQQIVTVSAPNTIQIPNSMIVTQQGSQQLTNAALIQTGQQAEHIQVAVNPESSIMIMDTSGKSEKIVTNQNMGSGEPMQGVDRVKEEKPFINCKMLPQQQMHGHQLTDQKMHIPHLLDVRNADGSLIKIQSQDQEMGKPLGVEMYKVNIEDLSQFLSYHEVFGKLHGGDVITHPISHSGTHVVNTISNVPAAVKTSTASNVVTSGANIATSTGELLMPKMENITPMPGVSQVPGATATLTNADGTTITPATHTCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCNVCFHVFANDASLERHMKRHSADKPFACTLCQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCNKTFTRKEHLTNHIRLHTGDSPHKCECCQKTFTRKEHLNNHMKQHSSDNAHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLIFHQRSHTKGQDVERPFRCEKCPKDFICKGHLVSHMRAHSGEKPHICALCSKAFVEKGNLKRHMKMNHPNVIIPPLGLVTNIKTEANPTTVTTVVSQYNTIKTETNPTTMATAPQYMNERIQLLKANLLPINPLIPHQAPTMHTIQQITATSANSTTGLVPIVTSTITSHGNQQQQQQQQQHVQMQQQSQQQQHPPPQQQQPNNQQPGDPTQTVPIAIIQAGDPATITRASIQLQHLPPGVDHSVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01376054;
90% Identity: iTF_00793687;
80% Identity: -