Npan029845.1
Basic Information
- Insect
- Nemotelus pantherinus
- Gene Symbol
- dl
- Assembly
- GCA_963978885.1
- Location
- OZ022264.1:73748187-73750025[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.4e-70 1.2e-65 222.7 0.0 1 169 59 226 59 226 0.98 2 3 0.4 6.8e+03 -1.0 0.3 116 130 475 490 447 522 0.60 3 3 1.4 2.3e+04 -2.7 0.6 112 137 557 582 549 584 0.66
Sequence Information
- Coding Sequence
- ATGTATAGTACAAACACAGCTCCTGCGGGAGGTGGCGGAGGCGGTGCCGAAAGCAATATGGATCAACAAGAACAAATGCAACATCCTGgtcaacagcagcagcagcaacaggACTCAACGCAGACAACGCAACAGGCTGCCAATATAGCACGGAGCATGCGACGACGTGCACATGTACGAATTGTCGAACAACCTGCCAGCAAAGCCTTACGATTTCGCTATGAAAGCGAAGGACGATCGGCAGGCTCTATTCCCGGAGTGAATAGTACGCCCGAAAATAAAACCTTTCCAACTATCGAAATTGTTGATTACGTAGGACTAGCTATTGTAGTTGTATCGTGCGTTACAAAAGATCCACCATATAGACCTCATCCCCATAATTTAGTTGGCAAAGAAGGATGTGAAAACGGTGTATGTCAGCTAAAAATTAAACCTGGCATAATGCGAGCAGTATTTAGTAATTTAGGCATACAATGTGTTAAAAAGAAAGATATCGAAAGTGCGCTTTGTGCTCGAGAAAAGATTGCTGTTGATCCTTTTAAGACTGGATTTTCACATCGATTTGAACCTGCTAGTATAGATTTAAATTCAGTTCGGTTATGTTTTCAAGTTTTTCTGGGGGATACAAAGGGACGTTTTTCACTGAACCCAGTCGTTTCCGATCCAATTTATGATAAGAAAGCAATGTCTGATTTAGTGATATGCAAATTATGTAAATGCTCAAGTACAGTTGCCGGTGGTAAAGAGATTATTCTTCTTTGTGAGAAGGTTACGAAAGAAGATATAGCTGTAagatttttcgaagaaaaggaTGGTCAAGTTATTTGGGAGGCTTATGGTGAATTTCAGCACACCGATGTACATAAACAAACAGCGATAAATTTCCGTACACCGAAATATCGAACACGTGATATAGAACAACCTGTTAAAGCTTACATTCAACTGAAACGGCCATCGGATGGTGCAACCAGTGAGCCTCTACAATTTGATTTTCTTCCACTCGATTCAGAACCAGGCTGTTTAAAACGAAAACGACAAAAATTTGCCGTTGAAGCTAGTTCCCATTTGTTCAGATTTCAAGCACAGGAACAGAAAAACCTCCAAGACCAACATCAACCTCAAGATGGTCATCATCATATGGGCTTTCTAAACCTGAATCAAAGAACGGCGATAAAAGCTGAACCACGAGATATATCACCACTCCTTTACGGGCTATTCCCAAACTCAACAGCGTACTGCTTACCCgaaaataataatcaacaaTACGGTGGAGGTGCAGCTGCGGCTGGCAGTTTAAGTCCCAACATGACAGTAGACATGAACGATTTAGGAGGACAATATCACGCTCAATATCAACCTCAACCAAGTCATAGTATGTCAAACTATAATCAGATGCCTCctcaaattcaacaacaacCGCAGCatcaacaacagcagcagcagcaacaacaacaacagcagcaacaacagcaacatcaTTGGAATATTTCGCCAGCCACAACAACGAGCACAATGAACAACCTTCGGACAACCAATTCCACCTTGGTTGCTAGTCAGCCTCAATGGAGTATGCCCAGTGGTATCAAACAAGAACAAATGCAGACAGTCAACAGTCTATCGACGAATCCGTTCATGATGGGAGCAAGTGGAGCACAGCATCATCAACCCCAACATCACCAACAAAATCACCATCAACAACCCCAACAACCACATCACCAACAGACGACAAGCAACATGAATTTGAATGAAGCACCCAATATTAGTAGTTTATTGGACATGGACAGCGAACTACTGATGCAATTCAACTCAGCCGAATTATCTGGTCTATCACTATCTTAA
- Protein Sequence
- MYSTNTAPAGGGGGGAESNMDQQEQMQHPGQQQQQQQDSTQTTQQAANIARSMRRRAHVRIVEQPASKALRFRYESEGRSAGSIPGVNSTPENKTFPTIEIVDYVGLAIVVVSCVTKDPPYRPHPHNLVGKEGCENGVCQLKIKPGIMRAVFSNLGIQCVKKKDIESALCAREKIAVDPFKTGFSHRFEPASIDLNSVRLCFQVFLGDTKGRFSLNPVVSDPIYDKKAMSDLVICKLCKCSSTVAGGKEIILLCEKVTKEDIAVRFFEEKDGQVIWEAYGEFQHTDVHKQTAINFRTPKYRTRDIEQPVKAYIQLKRPSDGATSEPLQFDFLPLDSEPGCLKRKRQKFAVEASSHLFRFQAQEQKNLQDQHQPQDGHHHMGFLNLNQRTAIKAEPRDISPLLYGLFPNSTAYCLPENNNQQYGGGAAAAGSLSPNMTVDMNDLGGQYHAQYQPQPSHSMSNYNQMPPQIQQQPQHQQQQQQQQQQQQQQQQHHWNISPATTTSTMNNLRTTNSTLVASQPQWSMPSGIKQEQMQTVNSLSTNPFMMGASGAQHHQPQHHQQNHHQQPQQPHHQQTTSNMNLNEAPNISSLLDMDSELLMQFNSAELSGLSLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -