Basic Information

Insect: Nematopogon swammerdamellus
Gene Symbol: -
Assembly: GCA_946902865.1
Location: CAMPPV010000111.1:374882-392668[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.58 1.5e+03 0.2 0.3 12 29 226 243 222 253 0.76

2 13 0.65 1.7e+03 0.0 0.8 6 22 278 292 275 294 0.84

3 13 0.044 1.1e+02 3.8 2.8 16 38 313 332 304 344 0.76

4 13 3.7e-05 0.096 13.6 5.6 2 44 464 505 463 505 0.92

5 13 0.0055 14 6.7 8.1 4 44 497 536 496 536 0.86

6 13 0.001 2.7 9.0 6.8 4 44 528 567 527 567 0.87

7 13 1.7e-05 0.045 14.7 0.7 14 44 574 598 569 598 0.89

8 13 0.00019 0.5 11.3 0.4 14 44 605 629 601 629 0.87

9 13 8.2e-05 0.22 12.5 0.2 14 44 636 660 632 660 0.88

10 13 0.053 1.4e+02 3.5 2.4 14 29 667 682 663 696 0.74

11 13 0.86 2.3e+03 -0.4 0.7 6 40 687 718 682 720 0.69

12 13 3.6 9.5e+03 -2.4 0.2 15 26 724 735 715 738 0.70

13 13 0.071 1.9e+02 3.1 0.2 10 43 748 777 739 778 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.58	1.5e+03	0.2	0.3	12	29	226	243	222	253	0.76
2	13	0.65	1.7e+03	0.0	0.8	6	22	278	292	275	294	0.84
3	13	0.044	1.1e+02	3.8	2.8	16	38	313	332	304	344	0.76
4	13	3.7e-05	0.096	13.6	5.6	2	44	464	505	463	505	0.92
5	13	0.0055	14	6.7	8.1	4	44	497	536	496	536	0.86
6	13	0.001	2.7	9.0	6.8	4	44	528	567	527	567	0.87
7	13	1.7e-05	0.045	14.7	0.7	14	44	574	598	569	598	0.89
8	13	0.00019	0.5	11.3	0.4	14	44	605	629	601	629	0.87
9	13	8.2e-05	0.22	12.5	0.2	14	44	636	660	632	660	0.88
10	13	0.053	1.4e+02	3.5	2.4	14	29	667	682	663	696	0.74
11	13	0.86	2.3e+03	-0.4	0.7	6	40	687	718	682	720	0.69
12	13	3.6	9.5e+03	-2.4	0.2	15	26	724	735	715	738	0.70
13	13	0.071	1.9e+02	3.1	0.2	10	43	748	777	739	778	0.75

Sequence Information

Coding Sequence: ATGTGTGACGTGAGAGTGTGCGTCGCGTGCCTCGCTACCGACGTGAGGATGTACAGCATGAGCGCCAGCAGTCTGCTGCAGCCCTACCAACTGCTCACAGGAAATGAGTTCCAGACGATAGATAAAATGCCTCAGAAGTTGTGCTGGGAGTGTGCGGCACTCGTGAACAAGTTCAACTTGTTCAGACACAAGTGTGAGAGAGCCTATCTACTGCTGCAGGACATCTACAACCAACATGATGAGAAGTTGTGCTGGGAGTGTGCGGCACTCGTGAACAAGTTCAACTTGTTCAGACACAAGTGTGAGAGAGCCTATCTACAGCTGCAGGACATCTACAACCAACATGATGAGAAGTTGTGCTGGGAGTGTGCGGCACTCGTGAACAAGTTCAACTTGTTCAGACACAAGTGTGAGAGAGCCTATCTACTGCTGCAGGACATCTACAACCAACATGATGAGATTGAAATTGAAAGAAAGAACAAGGCGAAAAAGAAGGAAAAGAAGAAGAAGAAGAATAAGAAGAAGCAGATAAAGGAACTAAAGAATGGGGTGAAGGTGGACGTTAAAAGAGAGCCGTTGAATAAGAAGGTGGATTTTGCAGATTTTGCCACAGCTGTTATTCTTACACAGGAACAACAAATGGAAGAGATCAGAAAGAGACGGGAGACAGCGAGCTATAAGGAGGCGTTCTTCAAGTGCTCGCTCTGTTACAAAGGGTTTGTCAATGACAAAGCGTATGGCAATCATATGAGAAAGCACGATCCGGCGACGGGCGAATATCAGTGCGACGTGTGCAAGAGCAGGTTCAAGAAGCGTTACTACGTCGCGGACCACATATATAAAGTACACATGACCAAATATGTGTGCAAGTTCTGTCCGTTTGTCAGTCAGTGCGTGTACCAAGCCAGCACACACTACAAGTGGCATAAAGGAGTTGTGTACAAATGTAACATTTGCACGGAGCAATTCACCACCAAGTCAACGTTCCTGAGTCACAGACGTATTAAACACGCGTCGGAGCATGTGTGTCCTGCTTGCGGAGAGTCATTCGTCAGCAGACTAGGTCTACTGCAGCATAATAGCAGGCTGCATAAGAACGCGTCAGCATCGGAGGCAAGCGGGCCCTATTGCGAGGAGTGCAAGGTGCAGTTTGCGTCGCACGAGGCGTTCACCAAGCACACCGTGATATCACCACGACACGCCGCTGATCCTCAGTtacaGAGCGGGTGCCGCGACTGCGGCGCGACGTTCGGCTGCGCGAAGGAGCTGCGCGCGCACCGCGCCGCGCGCCACCGCCGGCTGAAGGTGCGCGCGGCGCGCCGCGGCGGCCACGCCGACGGATACCCGGTCAAGTGCGCTCAGTGTTCGGAGATAATGGAGAGCGCACGCCGGTACTGGCAACACTTCCGCCGGTCGCATCCCACAGAGCAGTACCCGTCCAGCAAGCCGGCTATCTGCGAGTACTGCGGCAAGGGTTTCAAGAGATACTGGCAACACTTACGCCATTCGCACTCCACCGAGCAGTGTACCTCCAGCAAGCCGGCTATCTGCGAGTACTGCGGCAAGGGTTTCAAGAGATACTGGCAACACTTACGCCATTCGCACTCCACCGAGCAGTGTACCTCCAGCAAGCCGGCTATCTGCGAGTACTGCGGCAAGGGTTTCAAGAGATACTGGCAACACTTACGCCATTCGCACCCCACCGACCAGTGTCCCTCCAGCAAGCCGGCTATCTGCGAGTACTGCGGCAAGGAGTTCAAGAGATACTGGCAACACTTACGCCATTCGCACCCCACCGAGCAGTACCCCTCCAGCAAGCCGGCTATCTGCGAGTACTGCGGCAAGGGGTTCAAGAGATACTGGCAACACTTACGCCATTCGCACTCCACCGAGCAGTACCCCTCCAGCAAGCCGGCTATCTGCGAGTACTGCGGCAAGGGGTTCAAGAGATACTGGCAACACTTACGCCATTCGCACCCCACCGGGCAGTATACCTCCAGCAAGCCGGCTATCTGCGAGTACTGCGGCAAGGGGTTCAAGTGCAAGTCGGTGCTTGCCTACCACCGCAACACGCACACCGGCAAGCGTAACTACACGTGCAGCGTCTGCCCGAAGACATTCTTCACTCCGCAGAACCTGGACAACCATCTCAAGTCGCACTCGGACAGCCGGCCGTACGTCTGTGACTTGTGCAGCAAGGGCTTCAAGTTTAGTGTGGCCCTGCTGCGACATCGAAGGATCCACACGGGTGAGAAGCCGTACGTTTGCGACGTTTGTGGAAAGGGCTTTACGGACTCGAGCGGTCGGAAGGTCCACGTGCGAACCGTTCATCTCAAGGAGCCGACGCCGTACGTCAGCAAAGCGCGGCTGGAGAAACGACGCCAAGCTGACACGGCCAAGAGCACGCAAGAACAAAACTAG
Protein Sequence: MCDVRVCVACLATDVRMYSMSASSLLQPYQLLTGNEFQTIDKMPQKLCWECAALVNKFNLFRHKCERAYLLLQDIYNQHDEKLCWECAALVNKFNLFRHKCERAYLQLQDIYNQHDEKLCWECAALVNKFNLFRHKCERAYLLLQDIYNQHDEIEIERKNKAKKKEKKKKKNKKKQIKELKNGVKVDVKREPLNKKVDFADFATAVILTQEQQMEEIRKRRETASYKEAFFKCSLCYKGFVNDKAYGNHMRKHDPATGEYQCDVCKSRFKKRYYVADHIYKVHMTKYVCKFCPFVSQCVYQASTHYKWHKGVVYKCNICTEQFTTKSTFLSHRRIKHASEHVCPACGESFVSRLGLLQHNSRLHKNASASEASGPYCEECKVQFASHEAFTKHTVISPRHAADPQLQSGCRDCGATFGCAKELRAHRAARHRRLKVRAARRGGHADGYPVKCAQCSEIMESARRYWQHFRRSHPTEQYPSSKPAICEYCGKGFKRYWQHLRHSHSTEQCTSSKPAICEYCGKGFKRYWQHLRHSHSTEQCTSSKPAICEYCGKGFKRYWQHLRHSHPTDQCPSSKPAICEYCGKEFKRYWQHLRHSHPTEQYPSSKPAICEYCGKGFKRYWQHLRHSHSTEQYPSSKPAICEYCGKGFKRYWQHLRHSHPTGQYTSSKPAICEYCGKGFKCKSVLAYHRNTHTGKRNYTCSVCPKTFFTPQNLDNHLKSHSDSRPYVCDLCSKGFKFSVALLRHRRIHTGEKPYVCDVCGKGFTDSSGRKVHVRTVHLKEPTPYVSKARLEKRRQADTAKSTQEQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01042927;
90% Identity: iTF_01042927;
80% Identity: iTF_01042927;