Nswa034642.1
Basic Information
- Insect
- Nematopogon swammerdamellus
- Gene Symbol
- ttk
- Assembly
- GCA_946902865.1
- Location
- CAMPPV010002393.1:959578-984851[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.9e-09 1.6e-06 29.1 0.0 1 71 21 113 21 113 0.91 2 5 0.0054 2.2 9.4 0.0 28 71 114 161 114 161 0.87 3 5 0.0024 0.98 10.5 0.0 28 71 162 209 162 209 0.88 4 5 0.0024 0.98 10.5 0.0 28 71 210 257 210 257 0.88 5 5 7.6e-13 3.1e-10 41.1 0.0 28 100 258 334 258 336 0.91
Sequence Information
- Coding Sequence
- ATGTTGCCGCAACAGTATTGCTTGAGATGGAAACATCACCATACGAATGTCCAGAGCATGTTTTCTCAGCTCCTGGAGAAAGAGAGGTTCTGCGACGTGACGCTGTACTGCTCTGCGAGCTTCGGCTCCTCGTTGGGCCGCGACCCCGGAGACGAGACGGACAGCCTTCGAGGGGTGTCGTTACGCGCGCACAGGGTGGTGCTGGCGGCGTGCTCGGAGCTGCTTGGCTCGCTGCTCGGCGCTCACGACGTGGACGGCGGCAGCGGGCCGGCGACTGAGCCGGTGCTCGTGATAGACGGCGCCGAGCCGAGGCACATGCGGGCGCTCCTCGACTACATGGTGGTGCTGGCGGCGTGCTCGGAGCTGCTCGGCTCGCTGCTCGGCGCTCACGACGTGGACGGCGGCAGCGGGCCGGCGACCGAGCCGGTGCTCGTGATAGACGGCGCCGAGCCGAGGCACATGCGGGCGCTCCTCGACTACATGGTGGTGCTGGCGGCGTGCTCGGAGCTGCTCGGCTCGCTGCTCGGCGCTCACGACGTGGACGGCGGCAGCGGGCCGGCGACCGAGCCGGAGCTCGTGATAGACGGCGCCGAGCCGAGGCACATGCGGGCACTCCTCGACTACATGGTGGTGCTGGCAGCGTGCTCGGAGCTGCTCGGCTCGCTGCTCGGCGCTCACGACGTGGACGGCGGCAGCGGGCCGGCGACCGAGCCGGAGCTCGTGATAGACGGCGCCGAGCCGAGGCACATGCGGGCACTCCTCGACTACATGGTGGTGCTGGCGGCGTGCTCGGAGCTGCTCGGCTCGTTGCTCGGCGCTCACGACGTGGACGGCGGCAGCGGGCCGGCGACCGAGCCGGTGCTCGTGATAGACGGCGCCGAGCCGAGGCACATGCGGGCGCTCCTCGACTACATGTACACCGGCGAGATGAACGTACACCATTCGCAGCTGGCGTCGCTGCTGAAGACGGCCGAGGAGCTGCGGATCAAGGGGCTCTCGGACATACGGTGGAGCGGGAAGGACGAGCCGCCCGACTCCAAGAGCGGTGCGGTGACAGCTATAGCCGCGCCGCCAGAGCGCCTGCGCGCCGCCGCCCCCGCTCCCGCCCCCGCTCCCGCGCCCGCACCCGCACCCCACCACGACACCGGCAAGATCGGCGATAAGTTTAACGTCAACGGTGGACCCCCGCCGCTGATCAAGCTGCCCGTTAAGAACCTAGCGGACAAGATGAGCCCGGGACGCAAGCGGGAGCAGGCAACCGACACAGGAGAACGCGAACCGGAGTGGCATCACGGAAATTTGCAGGACATAACGGCGGAGAAGGTGGGCGCGTGGGGCGCGGGCGGCGAGGCGGAGAACAGCCGCGGCTCGTGGGAGAGCGGCGCGGGGAACTCGGACGAGGACGAGTGGGCGGACGCGCCGCACGACATGGCCTCCTTCCTGCACACGCGGCTGCAGGTCGACGGCGACAACAGCGGAGATAAGCGGGAAGGGGGAGAGTGGAAGGAGGGAGAGAGGAAGAGGGAGAGGGGGGAAGAGAGGGGAGAGTGGAAGAGGGAGAGGGGGAAGATAGGGAGAGAGGGGGGTGAGTGGAAGAGGGAGAGGGGGGAAGAGAGGAAGAGGGAGAGGGCGGAAGAGTGGGGAGAGTGGAAGAGGGAGAGGGAAGGAAGGGGGAGAGAGGAAGAGGGAGAGGTGGGGGGCAGAGCCCATGCTCCGATCACCCAATATCACCAGAAGAGCGGAGCGGCGAACTCGGACGAGGACGAGTGGGCGGACGCGCCGCACGACATGGCCTCCTTCCTGCACACGCGGCTGCAGGTCGACGGCGACAACAGCGGAGACGAGGAGCAACTGGACAACGGCTTGAGACTGGACGGCAAAGCGGAGATAAAGCCGGAGGTGACCGTGAAGCCGATCAGCCAACTGATGCCGGCCAATCGCACTCCGCCCAGAACGAGCAACGCGTCCAGTGTGGCGGGCGCGGGCGCGAGCGTGCTGACTGTCGGCCGGCTGAGCGGGCCCAACGACCCGCGCTTCTCCGACGTCATCAAGCTGAACGAGTACCTGCTGCACGGCCGCCGGCCCCAGTTCTGGGAGGAGGAGTACGTTCGGCGGGTGATGGAGGCGGTGCGACTGAAGGAGCTGGAGATGAAGCAAGCGGCGGAGATCCTCGGCGTGAGCTACGGCACGCTGTACGGCCGCTACCGCGACGTCTACGGCTGCATCAACAGACCTTATCGGTAA
- Protein Sequence
- MLPQQYCLRWKHHHTNVQSMFSQLLEKERFCDVTLYCSASFGSSLGRDPGDETDSLRGVSLRAHRVVLAACSELLGSLLGAHDVDGGSGPATEPVLVIDGAEPRHMRALLDYMVVLAACSELLGSLLGAHDVDGGSGPATEPVLVIDGAEPRHMRALLDYMVVLAACSELLGSLLGAHDVDGGSGPATEPELVIDGAEPRHMRALLDYMVVLAACSELLGSLLGAHDVDGGSGPATEPELVIDGAEPRHMRALLDYMVVLAACSELLGSLLGAHDVDGGSGPATEPVLVIDGAEPRHMRALLDYMYTGEMNVHHSQLASLLKTAEELRIKGLSDIRWSGKDEPPDSKSGAVTAIAAPPERLRAAAPAPAPAPAPAPAPHHDTGKIGDKFNVNGGPPPLIKLPVKNLADKMSPGRKREQATDTGEREPEWHHGNLQDITAEKVGAWGAGGEAENSRGSWESGAGNSDEDEWADAPHDMASFLHTRLQVDGDNSGDKREGGEWKEGERKRERGEERGEWKRERGKIGREGGEWKRERGEERKRERAEEWGEWKREREGRGREEEGEVGGRAHAPITQYHQKSGAANSDEDEWADAPHDMASFLHTRLQVDGDNSGDEEQLDNGLRLDGKAEIKPEVTVKPISQLMPANRTPPRTSNASSVAGAGASVLTVGRLSGPNDPRFSDVIKLNEYLLHGRRPQFWEEEYVRRVMEAVRLKELEMKQAAEILGVSYGTLYGRYRDVYGCINRPYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -