Nswa030163.1
Basic Information
- Insect
- Nematopogon swammerdamellus
- Gene Symbol
- Su(H)
- Assembly
- GCA_946902865.1
- Location
- CAMPPV010001451.1:17286-18173[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 2.1e+04 -3.5 0.0 24 44 186 206 178 210 0.43 2 2 5.4e-31 9.3e-27 94.5 0.0 1 62 224 285 224 287 0.98
Sequence Information
- Coding Sequence
- ATGCCGCACCAGTACGGGCCGGGTGGCGTGGCGCAGTCGCCGCCGTCGCCTCCGCCGCACGGCGGGCACGGCGCGCTGTATCCGCGCTACGCGACCGCCGCGGGCCCCGGTGCCGGCGCCTACCGGCCCGAGGAGCGGCGGCTGACGCGCGACGCGATGGAGCGCTATCTCCGCGACCGCTCCGACATGGTGATCGTGATCCTGCACGCAAAGGTCGCGCAGAAGTCATACGGTAACGAGAAGCGGTTCTTCTGCCCGCCGCCGTGCATATATCTGTTCGGGGAGGGCTGGCGGCTGCGGCAGGAGCGTATGGTGCGCGAGGGCGAAACAGAGCAGGCGTCGCAGCTGTGCGCGTTTATCGGCATCGGAAACTCCGACCAGGACATGCAGCAGCTGGACCTCAACAATGGCAAGCAGTATTGCGCGGCCAAGACTCTCTACATCTCCGACTCGGACAAGCGCAAGCACTTCATGCTCTCCGTGAAGATGTTCTACGGCTCGGGGCACGACATCGGCGTCTTCAACAGCAAACGGATCAAGGTGATCTCGAAGCCGTCGAAGAAGAAGCAGTCGCTGAAGAACGCGGACCTGTGCATCGCGAGCGGTACGAAGGTGGCGCTGTTCAACCGGCTGCGCAGCCAGACGGTGTCGACGCGCTATCTGCACGTGGAGAACGGCAACTTCCACGCGTCGTCCACGCAGTGGGGCGCCTTCACCATCCACCTGCTGGACGACAACGAGTCAGAGTCGGAGGAGTTTGCGGTGCGCGAGGGCTACGTCCACTACGGCTCCACCGTCAAGCTCGTCTGCTCTGTAACCGGCATGGCCCTGCCGAGGCTCATCATCAGGAAGGTAATCATCTGCACAGGGCCAGCTCCGCTGTGGTAG
- Protein Sequence
- MPHQYGPGGVAQSPPSPPPHGGHGALYPRYATAAGPGAGAYRPEERRLTRDAMERYLRDRSDMVIVILHAKVAQKSYGNEKRFFCPPPCIYLFGEGWRLRQERMVREGETEQASQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGSGHDIGVFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVREGYVHYGSTVKLVCSVTGMALPRLIIRKVIICTGPAPLW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086067;
- 90% Identity
- iTF_01086067; iTF_00178933;
- 80% Identity
- -