Basic Information

Insect: Nemapogon koenigi
Gene Symbol: -
Assembly: GCA_963924495.1
Location: OZ004655.1:5939454-5945939[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.56 39 5.5 0.4 1 23 444 467 444 467 0.94

2 8 0.044 3.1 9.0 0.3 2 23 489 510 488 510 0.92

3 8 2.5 1.8e+02 3.5 0.0 1 23 530 552 530 552 0.94

4 8 0.019 1.3 10.2 1.6 1 21 556 576 556 577 0.94

5 8 5.7e-06 0.00039 21.3 0.1 1 23 583 605 583 605 0.96

6 8 0.49 34 5.7 2.0 1 23 611 634 611 634 0.95

7 8 0.064 4.5 8.5 0.7 1 23 641 664 641 664 0.96

8 8 0.0018 0.12 13.4 2.0 1 23 670 693 670 693 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.56	39	5.5	0.4	1	23	444	467	444	467	0.94
2	8	0.044	3.1	9.0	0.3	2	23	489	510	488	510	0.92
3	8	2.5	1.8e+02	3.5	0.0	1	23	530	552	530	552	0.94
4	8	0.019	1.3	10.2	1.6	1	21	556	576	556	577	0.94
5	8	5.7e-06	0.00039	21.3	0.1	1	23	583	605	583	605	0.96
6	8	0.49	34	5.7	2.0	1	23	611	634	611	634	0.95
7	8	0.064	4.5	8.5	0.7	1	23	641	664	641	664	0.96
8	8	0.0018	0.12	13.4	2.0	1	23	670	693	670	693	0.96

Sequence Information

Coding Sequence: atgagCATTGATGAAGGGTCCTGTAGATGCTGCCTCCTTGTAGGTTCATTTTCCGATATGTGGCAAGAATATAACTGGCTTGGAGAAGTCGAAGTTTATGGAGACATGATAAAGGAATGTTTTGGTGTGTCGTTATCTCGATTTAATTCATCAATAACAAGGGACCAGATATGTGAAGATTGTATAATGCGTTTGCGAGACGCTTGGACTTTTAAAGAACAGATATTAAATTCCAATCAGCAATTGATTGAGCACATGACCaTAAACAACATGCAGTCAGATAATGAAGAGATTGAACACTTAGAAAGTAATGGTGATGGTTCTTGTAGTGATAAATCTGATTATAATTTAAGTGATGGCAGAGATGAGGCAGCAGACAGTGAAAAAACTTATGAGGTGATtgaatatttagaaaataaagAATCTGATGAAGTTAATGATGAATTACCAAAAGTAAGCAATAACAATGTATCCACTTTGAGATATACTGAAGAACAACTCAAATTATGCTTAGAAGCTGTTAAAGCTGGGCATCTAAACCAAGTACAAGCCGCAGAAACATTTAACATTCCTCGACAAACAATATGTTTCAGACTAAAACAAGAAACTGGTGATAATTATAAAGAAGTTGTATCCAGATGGAAGAAGGAGtccaaaataaaagaaaacgaTAGTAAAAAACTTAAGCTCCTAGAGAAAGAATCGAAACTGCATGAGTGCTTGGAACATGTAAAAGAAGGAAGTATATCAATGAAGGCAGCTTcaataaagtataaaatatccataaacactataaagaaAGCATGGCGCAAAGAGTACGGGCCTAATTATAATGACGCAATTACAgagattaaaaagaaatatgttGAGTATAAAAGGAATCACCAGGAGCCGAAGACCAGAAATCGATCAAATGGATGTGTAACTAAAATACTCAGACCGAGTAAACTTACTCTAATGCAAGCTGTAACTGATGTTAAAGACAAGAAGATATCAATACTTTCAGCATCTGCTCATTACAATATTCGTAGCAAATTACTGTCCAAAATAATTTCGCAAGACATTGATGTGTTTAAGACCGAGCCAGACCATATATTTTGGAACAGAGTTTTGAATAATTACACTGAAAGTGAATTAGCTAATTGTGTGGAAATGGTAAGAAAAGGTGTTATGACACAGAAAAAGGCTTCTGAGGTGTATCTTATACCTGAGGCTGTTATATCAAAGagtgtaataaaaagtattaacgATGGATTTATTAAAGAAGACTGTCTAAATGTAGTTCTACAATATACGAACGCAATCCCTTTTGAAGTTACCAAGAGTGGGTTTATGTGTGCTTACTGTTCAATTATTATCGATAATTGTGAAGAACTGAGATTGCATACACAGTTAGACCACAGCAACGCAAAAGACAACGAAATTAATAAAGCAGATATTATTAGATTAGacattttagatttaaaatgtGTAATTTGCGACAAATATATAGACCAATGGCACGAATTACAACTGCATTTCGcagaacataaaattaaaattattaattcggATAAAATAATTCCATATACGTTGTACCATGGGACGTATATATGCGCGTTGTGTGAAGAAATTTATCCTGACTTTAAAGTTCTTGATATGCACATGGATGAGcattttattaattatgtcTGTCAGAATTGTGGGCAGCCATTTTTTAATCTTACCAGACTGCATAGACACAAGCAATactgtaattataataaatatatatgcgATATTTGTGATAAAGAATTTAATGTGAAATATAATTTGAGAATTCATATAGAAGATCATATGCGGCCTTTGAAATTTTCTTGTAGCTACTGTACAAGTTCATTTGGTTCTGCATGCGAAAGGTATgtgcatataaaaaatgtgcatTCTGAAAAGCTGCGTCAATATCCTTGCAAGTTGTGTAATAAATTATTCAGTTGGAAGCCGTTTTATATGGCACATTATAGAATAATGCATGTTAGGAATAGTCGGTTTCAATGCAGTTCTTGTAGAGAAAAGTTTTATACACAGATTTCGTTGGAGAAACATACTATAAGACAACATCGCGTTTCAGTCAtaactttgtaa
Protein Sequence: MSIDEGSCRCCLLVGSFSDMWQEYNWLGEVEVYGDMIKECFGVSLSRFNSSITRDQICEDCIMRLRDAWTFKEQILNSNQQLIEHMTINNMQSDNEEIEHLESNGDGSCSDKSDYNLSDGRDEAADSEKTYEVIEYLENKESDEVNDELPKVSNNNVSTLRYTEEQLKLCLEAVKAGHLNQVQAAETFNIPRQTICFRLKQETGDNYKEVVSRWKKESKIKENDSKKLKLLEKESKLHECLEHVKEGSISMKAASIKYKISINTIKKAWRKEYGPNYNDAITEIKKKYVEYKRNHQEPKTRNRSNGCVTKILRPSKLTLMQAVTDVKDKKISILSASAHYNIRSKLLSKIISQDIDVFKTEPDHIFWNRVLNNYTESELANCVEMVRKGVMTQKKASEVYLIPEAVISKSVIKSINDGFIKEDCLNVVLQYTNAIPFEVTKSGFMCAYCSIIIDNCEELRLHTQLDHSNAKDNEINKADIIRLDILDLKCVICDKYIDQWHELQLHFAEHKIKIINSDKIIPYTLYHGTYICALCEEIYPDFKVLDMHMDEHFINYVCQNCGQPFFNLTRLHRHKQYCNYNKYICDICDKEFNVKYNLRIHIEDHMRPLKFSCSYCTSSFGSACERYVHIKNVHSEKLRQYPCKLCNKLFSWKPFYMAHYRIMHVRNSRFQCSSCREKFYTQISLEKHTIRQHRVSVITL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01041666;
90% Identity: iTF_01041666;
80% Identity: iTF_01041666;