Basic Information

Insect: Nebria salina
Gene Symbol: stc_1
Assembly: GCA_944039265.1
Location: CALUEJ010000376.1:81263-88432[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.51 8.6e+03 -2.2 2.8 3 8 625 630 621 631 0.80

2 10 3e-06 0.05 14.5 13.7 2 18 670 685 669 686 0.91

3 10 2.1e-08 0.00036 21.4 11.8 1 18 722 739 722 740 0.97

4 10 3.1e-07 0.0051 17.7 14.4 1 18 780 797 780 798 0.98

5 10 1.4e-05 0.24 12.4 12.2 4 19 846 861 839 861 0.88

6 10 0.073 1.2e+03 0.5 9.2 1 11 901 911 901 923 0.90

7 10 1.1e-10 1.8e-06 28.7 14.3 1 19 928 946 928 946 0.98

8 10 2 3.3e+04 -4.7 10.6 9 19 992 1003 983 1003 0.81

9 10 1.4e-06 0.023 15.6 11.2 1 15 1039 1053 1039 1060 0.94

10 10 0.14 2.3e+03 -0.4 20.7 3 19 1072 1090 1071 1090 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.51	8.6e+03	-2.2	2.8	3	8	625	630	621	631	0.80
2	10	3e-06	0.05	14.5	13.7	2	18	670	685	669	686	0.91
3	10	2.1e-08	0.00036	21.4	11.8	1	18	722	739	722	740	0.97
4	10	3.1e-07	0.0051	17.7	14.4	1	18	780	797	780	798	0.98
5	10	1.4e-05	0.24	12.4	12.2	4	19	846	861	839	861	0.88
6	10	0.073	1.2e+03	0.5	9.2	1	11	901	911	901	923	0.90
7	10	1.1e-10	1.8e-06	28.7	14.3	1	19	928	946	928	946	0.98
8	10	2	3.3e+04	-4.7	10.6	9	19	992	1003	983	1003	0.81
9	10	1.4e-06	0.023	15.6	11.2	1	15	1039	1053	1039	1060	0.94
10	10	0.14	2.3e+03	-0.4	20.7	3	19	1072	1090	1071	1090	0.92

Sequence Information

Coding Sequence: ATGGCCCAGTGGAACCCGTTTTTTGGTGTTCCAAATCAAGATAAGTTCGACGAACAACAACAAAGCATAAGCTCGCCGAATATTTATAACGCCCAACCACTTGCGTACGCCAGTGCGCCGATTCCACAGGTCAATTATAACGGGTACTATTTACCGAATCACTTCACAGCGAATTATGGGGGCGAAACGGTGTATAATGTTCAAGATTTAGAGGCGCATCATATTCGGCAGGCCAGCTCCATGAAGAATGCTTCAATCATGTATGACAAGCCGGAGGAACTATTAAGCAACTCAAAATTAACACCGACCGCGGCAGAATTTAAGCCGGGCTCCAGCACAAATTATCAGTTGAATTCACAGACTTTTTACGGGAAATCGCAAAAGTCTGCAGATGAAATTCACAAAGGAGCTATACGTAAACACAATAGCACTAAGGGTAAATTTGTAGAGGCGTCTTCAtcttcttttattaaaaacactgATGAAACGCAAAAATTGTCGTACGGTAAAAATAATCCAAATCCAAAGTATAAGAAATATGATCGAAATGCACAACAAAAACGAGACGAAAACGAAGACGTTGCAAATTACGTAAAACCAAGCGataacaaattcaataatggaagaaattataaaattactgacaaatcaaatagtttttacgATAACAGTTCAATTTCCAAGTACATCAAGCgtgaaaataacaattcaaGGCAAACGCACTCTTTAGACCAGCAAAATGAATCGCCAAAGCTTCACAAACTAGAATATCGCGATATTAATTTCGCTAATTCAAACTTAAAAAGTGAACCCTCAAATAATGAGTTCACTAAGACAGACACGCGACCGGTCAAGTATgaaaattcaattcaaaacGAGACAGAAAATCGCCCTCacaacaaatatgaaaatcgtaacaataaaaatgagccGAATTCGTCACGAAGTGAAAACCGTTACAATAAATACGACAAACGTGAACAGAGTTTCAGAAAACTCGGCGACAACCGATACTCAAATGAATCGACAAGAAGTGAACACCGGTACAATAGACATCGTGAAAACGAGCTagaaaatcaatcaaaacctgaaaatcgatataaaaaatttgaaaatcgcGATACCTTAAATCAAAATGATGATTCATCATACAAAAATGAGCATCGGAATAACAATAATAAGTATGATAAAAAAGAGAATTGCCCGCAGAACGACGAGAGACCCGGGAAAACCGAAAGCAAGTACCAAAAATCGGAACATTTCAATCCGAATGACACGAGAAAAGAGAACCGTTACAATAAACGTGAGAATGACGCAGACAACCGTTACCAATCGTACCGCGAATCGTTCGCGTCGAATGAACCAAAAATTGATGCGCGCTACCAAAAGTTTGAAAATCGCGACACATACAGCCGCAATTATCGAAATGCCGCAGATGGAAATCAATACCAACGCGACAACTATAATCGATCAAACCAAAAGAGTTATCGGACCAATAACAGATACGATAAAACGTACGAGAATTGGCGTAGCACAGATTCGAGAAATCAACTTGATAAACCTCTAGAGAAAGAACAAAATGATTATAAAGATGATCAAATTAAAGATCGTAAAGATAATAAGAAGGtgtttcataataataacagtGATGTTTCTAGGAATTATaaagCTTTAGATGATGTTTCGCAACGAGATCGGTTAACGGAGCAAGTGAATCGAGGCACTCTGGAGTGTTTAGTGTGCTGTGAACGCGTTAGACAAACAGATAAAATCTGGAACTGTCGAAATTGCTATCATATCTTCCATTTGCGGTGCATTACAAAATGGGGAAATACTTCAAAAGATGACAATGGTTGGCGTTGTCCGGCATGTCAACACACCTGTACCGAGATCCCCACGGGTTATTATTGTTACTGTGGCAAAGCATACGATCCACAATACATACCGGGCGACACGGCGCACGGATGTGGCGATATGTGCGCCAGATTGGGCGTGAAGCTCGGTTGTGCGCATCGCTGCACTCTCTTGTGCCACCCCGGTCCATGTCCGAAATGCGAAGCATTAGTATCCAAACACTGTAACTGTGGTGCAACAACTCAAATGGTGAAATGTAGTGCAGAAACAATTCTAATATGTACGGCAGTCTGTAGTAAACTGTTAAATTGTGGCGTGCACAAGTGTACCAAAGTTTGTCACGGCGGAGACTGCGACCAGTGTCTCGAAATTATTGACCAAGAATGCTTTTGCGGTCACAGCACTCGCACAATTCCATGCaataaaatgcaatataaTGTGAAGAACTACAGCTGCGAAAGCAATTGTGGTCAGTTGTTGACGTGCGGCAACCACCAGTGCAAGGAGCTATGCCATCCGGAAACTTGCCCACCGTGCGTACGAGCCGTGGATCAAGTTCAGACGTGTCCATGCGGAAAGAGTCCATTAGAGATTGTTCGCGTCTCTTGTCTAGATGCGATACCCTCTTGTGGAAAGGTTTGCGGTAAACGATACACACTTTGCGGCACATCTGCAGAACCTCACGTTTGTAAATCAGAGTGCCACGAAGGAGACTGTTCGCCGTGTCCGTTGAGTAGTTTTGTGCGCTGCCGCTGTGGTCACATGAGTTGTGAAATTAAGTGCTCTGTCTTGAATACTCGCACGGACGATGCACGCTGCGAGAAACGCTGTACTAAGAAAAGGTCTTGCGCGAAACATAAATGCAACCAATTGTGCTGCATTGATATCGATCATATCTGCCCACTACCGTGCAACCACATGCTGACATGTGGTCAACACCGTTGCGAGCAAACATGCCACAAGGGCCGGTGTCAACCGTGTTGGAGAACTAGTTTCGAAGAACTGTATTGTGAATGCGGGGCGAATGTTATCTACCCGCCGGTCCCGTGCGGTACCAAGCGTCCTGCGTGTGCACGATCGTGCAAGAGAGCTCATGACTGCAGTCACGAAGCATTGCACACATGTCACAATCAACCTGAATGTCCACCGTGCACCGTACTAACGACCAAAGTATGCTATGGGGGTCACGAGAAACGTTCAACAATCCCATGTCATCAGAAGGAATTTTCGTGCGGACTACCATGTGGTAAAGAGTTATCATGTGGCAAGCATAAATGCCTGTCGCCTTGCCATAGAGGCGCGTGCCTGAAAGAGGGGCAAGTGTGTGCGCAGGCGTGCACGATAGTGCGCAGCGATTGCGAGCATGCGTGCTGTCTCCCCTGCCATCACGGTCCCTGTCCGGAATCCCCATGCAGACAAACGGTGAAAGTGACTTGTCAATGCGGCCTACGTTCATCAACACGCGCATGCGTCGACATGAGTGGGGAATATCAACGGATTGTTACCTCAATGCTTGCTTCGAAAATGGCCGATATGCAACTGAGTCATTCGGTTGATATCGGTGATATTAATGGGGCTATCACACGGAAAACATTGAAAACATTAGATTGTAATGACGAGTGTCGCCTGATAGAAAGAAACCGACGTTTGGCGATCGGTTTGCAAATCCGGAATCCAGACTTGAGTGCCAAATTAACACCGCGTTATTCGGATTTCATGCGGCAATGGGCGAAAAAGGACTCACATTTCTGTCAACTGGTGCATGATAAATTAACCGAACTGGTTCAACTTGCGAAACAATCGAAACAAAAGTCTCGCAGCTATTCGTTCCCATCGATGAATCGCGATAAACGACAATTTGTACACGAATATTGCGAGCATTTTGGGTGTGAGAGCGCTGCGTACGATTCGGAACCGAATAGAAATGTTGTTGGAACGGCTGTTCGTGATCGCGCGTGGTTGCCAAGTTGCAGCCTGTTGGAATTAATACAACGCGAAAGTGGACAACGTAAAGTGCCTGGCCCTATTCTGAATCGTCCGTTGGGCGTGTCGAAAGGCGTGTCCGACATCGTTTCATTGAAAATCAACTCTTTCGCAATGAAGCCGGCAACGACGGCTTCCGTTGTTGCACAAGCTGCCTCCATTTCAACAACTGCAACCACTAATCAAACACAACCACAAACATCAGATACTTCAGAAACTATAGATTATTTCAATTTCCCtcctttaaataaataa
Protein Sequence: MAQWNPFFGVPNQDKFDEQQQSISSPNIYNAQPLAYASAPIPQVNYNGYYLPNHFTANYGGETVYNVQDLEAHHIRQASSMKNASIMYDKPEELLSNSKLTPTAAEFKPGSSTNYQLNSQTFYGKSQKSADEIHKGAIRKHNSTKGKFVEASSSSFIKNTDETQKLSYGKNNPNPKYKKYDRNAQQKRDENEDVANYVKPSDNKFNNGRNYKITDKSNSFYDNSSISKYIKRENNNSRQTHSLDQQNESPKLHKLEYRDINFANSNLKSEPSNNEFTKTDTRPVKYENSIQNETENRPHNKYENRNNKNEPNSSRSENRYNKYDKREQSFRKLGDNRYSNESTRSEHRYNRHRENELENQSKPENRYKKFENRDTLNQNDDSSYKNEHRNNNNKYDKKENCPQNDERPGKTESKYQKSEHFNPNDTRKENRYNKRENDADNRYQSYRESFASNEPKIDARYQKFENRDTYSRNYRNAADGNQYQRDNYNRSNQKSYRTNNRYDKTYENWRSTDSRNQLDKPLEKEQNDYKDDQIKDRKDNKKVFHNNNSDVSRNYKALDDVSQRDRLTEQVNRGTLECLVCCERVRQTDKIWNCRNCYHIFHLRCITKWGNTSKDDNGWRCPACQHTCTEIPTGYYCYCGKAYDPQYIPGDTAHGCGDMCARLGVKLGCAHRCTLLCHPGPCPKCEALVSKHCNCGATTQMVKCSAETILICTAVCSKLLNCGVHKCTKVCHGGDCDQCLEIIDQECFCGHSTRTIPCNKMQYNVKNYSCESNCGQLLTCGNHQCKELCHPETCPPCVRAVDQVQTCPCGKSPLEIVRVSCLDAIPSCGKVCGKRYTLCGTSAEPHVCKSECHEGDCSPCPLSSFVRCRCGHMSCEIKCSVLNTRTDDARCEKRCTKKRSCAKHKCNQLCCIDIDHICPLPCNHMLTCGQHRCEQTCHKGRCQPCWRTSFEELYCECGANVIYPPVPCGTKRPACARSCKRAHDCSHEALHTCHNQPECPPCTVLTTKVCYGGHEKRSTIPCHQKEFSCGLPCGKELSCGKHKCLSPCHRGACLKEGQVCAQACTIVRSDCEHACCLPCHHGPCPESPCRQTVKVTCQCGLRSSTRACVDMSGEYQRIVTSMLASKMADMQLSHSVDIGDINGAITRKTLKTLDCNDECRLIERNRRLAIGLQIRNPDLSAKLTPRYSDFMRQWAKKDSHFCQLVHDKLTELVQLAKQSKQKSRSYSFPSMNRDKRQFVHEYCEHFGCESAAYDSEPNRNVVGTAVRDRAWLPSCSLLELIQRESGQRKVPGPILNRPLGVSKGVSDIVSLKINSFAMKPATTASVVAQAASISTTATTNQTQPQTSDTSETIDYFNFPPLNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01040529; iTF_01039803;
90% Identity: iTF_01039803;
80% Identity: -