Nsal002225.1
Basic Information
- Insect
- Nebria salina
- Gene Symbol
- BTBD9
- Assembly
- GCA_944039265.1
- Location
- CALUEJ010000013.1:1445494-1449963[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00045 0.19 12.8 0.1 9 108 130 222 123 224 0.86 2 3 1.5e-15 6.3e-13 49.7 0.0 22 106 626 712 622 715 0.92 3 3 0.031 13 6.9 0.0 72 109 710 747 710 748 0.91
Sequence Information
- Coding Sequence
- ATGGCTGCGTATGCTTTTATTGGATCGTGGGAGgTAGTGGCTGTTCTTAACAACCATAATGACAAAACAGGTCTTGAAGGGGTTAGATTCCGGTTGGATGAAAGCGGTGATGTGACTTGGACGGCACCGGAAGAAGTGAAAACTAACCCGCTCTTCAGTTGTGAAACGTATGAAGTCTACAGTACTTCAGTTCTAGGAGTAATCTTACGTTTCGGGGCTTATGCTGGgcatataattgaatttaaatcTGATCAAATCGAACCACGCGATTCGGTGGTTTTAACTTGTGAAGGCTGGTGTATGGTTCAATGTAAGCGAATTACAGAAGAACAAATCGAACCCATCGTAAACCCAATCTTTTCATTATTACCCGCACTAGAAGATAGTTACTTTCATGATTTAAGTATATCAGCCTCCAATAAAAaacaatTCAGAGTTCATTCAACAATACTACAACTTCAAGGGTCGGATTTAGCGTGGCTGTCGCAACCGCCGCCGCTCCAAGGACTTCCTGAGGAAGTCCTTGGGACGATTTTGCATTTTTTGTACGCGGAATGTCTACCACCGGACCTAACCGAGGGTACGGCACGGCAAGTTGTGACAGCTGCGCAATCTTATCcttgtttaacaaaattggTAAATATGTGCCGAGCGTATTTGAAGAACATGGCGCTCAAACAACAAATTATTGGACTTGTGAGTGATATGCACACTTGTGCCAATCAAATTATCGAACATTTTCATAACAGACACTGCCAAAGTGTGTCTGATAATATCACATCGAATCCCGCGAAATTGTGTAATGTTGTTAAACAATCTGTTATGGAAACAGCAGTTGCTGGTGCAAAACTCTTATTACTCTGTGACCTTTTCACGAAACGAAAAGGTGAATTGTCACGTGAAGAACGTCACGAAATAATACGTTACGCGCGCTCACGTTTACCGATTTTTATGTCGCAACTGCACCGCTTCTTACAGGCGGTAAAAGCAACCTTTAGCAACATGTCCGCCACACAAAGACAAGAAGTTGCTACGTATTTAGTGCCAGAGATTGAAATAATCTTGGACACAATTTCTGCACTTATTGTCGAAGTTAAAAGCGCGTTAGAGAAAATAATACGAGTGCTTTCACCTGGGGAAAGCTGTCGGATAAAGTCTGGTGTTGGGGATATGTTAGGGAAGTCGTTGAGGAACGTTTTGCATATTCGGGAATTaactaaattgaaaaattttcATGAACATGTTACTTGTAGTTTGGGATTGCTTTTGCATAAAAAGGAGAGTTTTAATGAAATGACGGGGGCGCAAAGGGCTAGATCTGTTGCTAAAAACTTAGAACAACTCATAGAAGAACTTCCAATATTTTTGCTTCGCCTTGAAGAAGTAACGGCTGCTCTAGACGACAGATTAGAGTGGCGAgagtttaaattttgttttaaagtcGGAACTAGTAAAGTAtcaggaattttacaaaaattgttgTCTCATCGTTCAACTTTAAACGAAGTCATTACCCAAATATGTGATTTAGTTCAGAAGGACTCTTTCACCCAGAGCATGCACACGTTAGGTCTGCTTGACCCGACCGCGAACGCGAGTCAAAGCGGAACGGAGTGTGCGCAAAGACCTGGTGCACGACCTCCAATAAACACTACCCCAAAAACGCAACAGGGTTGTAAGTTGAATTTAGTTGAGTCTTTGTGCGTTTCGCCTTCAGCGAATTGTAGCGCGTTGTCCAAATTAAgtttgcaattattaaaaagtgGCATTGGCACCGATATGGAATTTGAGGTGATGGTCACTGTTGGGTCTGTGGATGCTTTACACCAAGAGTCTGGGGATAGTGGGACTGAAACTCCTGAAGCAGATATTTGTACTATTCGAGCACATAGGGTCATTGTTGCGGCTAGGTGCGATTGGTTCAGGAGAGCCTTACTTAGCGGTATGCGAGAAGCTATCGATAAGAAAATAATAATCCATGATTCAAATCCGTTTTTATTTCGCACTTTCTTGGAATATTTATACAGTGGACGTTTGCGGCATTCTTTACTAACCACAGATCAACTAGCAGAGCTTCTCTTGCTTAGCGATAGGTACGAAGTCGACTCATTGAAGCAAGTCTGTGAATATGCTTTACGATTGAACATGGACgaagaaaatgttttatatctcCTAAGTATGGCTGATCAATTTAACGCAACTCTATTAAGAgaTGGTTGTTTTACGTACATATCGCAACATCCAGAAGTAGCAGACTCTGAATTGTTTTCCGAGCTACCACCATCACTACAAACGGAAGTTTATGAATTAGTGTTATGGGCAGGACCTCCACGCAAATCAACAACAACGGAACAACTACTACCATCTACCGGTACACCTCCAAGTCCCACCGACTTGGAGGACACTGCTGATATGTATGGGCGAATGCGTTTTGGTCCCAATAAAATTGAACTTCCATCTGATACGAGTGCACTAGAGGAAATACCGATTCCGCAAGACACTGCTCGTTTAGAGTTATGCCTATCGCATCTTAGAGATATTTTAGGGGATGAAGCACCTCGAGAGAGGCTTGTGCAGTTTTTACTAGCTGCGGATTACGATATAAATCGCGCTATTAACTTTTACTATTCTAGTATGTCCCAGTAA
- Protein Sequence
- MAAYAFIGSWEVVAVLNNHNDKTGLEGVRFRLDESGDVTWTAPEEVKTNPLFSCETYEVYSTSVLGVILRFGAYAGHIIEFKSDQIEPRDSVVLTCEGWCMVQCKRITEEQIEPIVNPIFSLLPALEDSYFHDLSISASNKKQFRVHSTILQLQGSDLAWLSQPPPLQGLPEEVLGTILHFLYAECLPPDLTEGTARQVVTAAQSYPCLTKLVNMCRAYLKNMALKQQIIGLVSDMHTCANQIIEHFHNRHCQSVSDNITSNPAKLCNVVKQSVMETAVAGAKLLLLCDLFTKRKGELSREERHEIIRYARSRLPIFMSQLHRFLQAVKATFSNMSATQRQEVATYLVPEIEIILDTISALIVEVKSALEKIIRVLSPGESCRIKSGVGDMLGKSLRNVLHIRELTKLKNFHEHVTCSLGLLLHKKESFNEMTGAQRARSVAKNLEQLIEELPIFLLRLEEVTAALDDRLEWREFKFCFKVGTSKVSGILQKLLSHRSTLNEVITQICDLVQKDSFTQSMHTLGLLDPTANASQSGTECAQRPGARPPINTTPKTQQGCKLNLVESLCVSPSANCSALSKLSLQLLKSGIGTDMEFEVMVTVGSVDALHQESGDSGTETPEADICTIRAHRVIVAARCDWFRRALLSGMREAIDKKIIIHDSNPFLFRTFLEYLYSGRLRHSLLTTDQLAELLLLSDRYEVDSLKQVCEYALRLNMDEENVLYLLSMADQFNATLLRDGCFTYISQHPEVADSELFSELPPSLQTEVYELVLWAGPPRKSTTTEQLLPSTGTPPSPTDLEDTADMYGRMRFGPNKIELPSDTSALEEIPIPQDTARLELCLSHLRDILGDEAPRERLVQFLLAADYDINRAINFYYSSMSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01039410; iTF_01040259; iTF_01229872; iTF_00873198; iTF_00470101; iTF_01275536; iTF_01225977; iTF_00029469; iTF_01104883; iTF_00768931; iTF_00767344;
- 90% Identity
- iTF_00873198;
- 80% Identity
- -