Nsal009925.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nebria salina
Gene Symbol
jarid2b
Assembly
GCA_944039265.1
Location
CALUEJ010000075.1:320294-325810[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-22 5.9e-19 69.1 0.0 6 89 1084 1164 1079 1164 0.92

Sequence Information

Coding Sequence
ATGGTTGTAAGTCGGAATGATGTCAAACGCAAGAGAAAAGATAGTGATACCACAGTTGATACTCTTCCAGAGAGCCCTAAAAGGACTAAAGTTCATGCCCAGAGAAAATTCGCACAGGGCTCAAACGTAAGCAGCCCTGTAATAACACCAGTCAAAGAAATAGATAGGGACAAAGTTAAAATCGACGTACTTCCAACACCCTCAGAACTGTTACCGATTAAACGACCAAACACCGAAGACTTCCTAACATTTCTATGTTTTCGCGGCACACCAATCCTACcaccaaaattaaattacttcaaCACCACAAGCACACTAGCCTCCCAAAATGTCGCAACAGAAACAGAAGCGAAAACAAACGAAGCCACCACGGCATCAACAACAAACGACAGTCAAGAGAACGAGTCGTCCGAGCGACCATTCATTGCATTCGGAGTTCGAAAACGAGCGGATCcattcataaataacaaactcGAGAAAAAGCGGCGACATGCAATTGCTCTGCAGGCCTTACGGCGCAAATACCAAGAACAACGTATGGCGAAAATCCGCGCGGTTACAATCGAAAAAATGTCGGAAGGGATTAAAATCAAAAGTAAAAACTTGGTACAAACTCGGTCGGTTACGAAACAAGTGCGACAAGCAGCACCAACAGAGAAGCGAAAACTTAAAGTTGTCACAAAAcgcgttaaaataacaaatagaaCGGCTGTTAAAAGACCTATTTTAAAACAGAAAATGTGTTTGAGAAGTCGCACCCGTTTAATACCTAGAGATATACCAGTTCCAGtgaagaaaaaaattactaaagttGTAATTCCAACCAAAATTCAAACAGTTAAAAAGGATAGCTCATCTGAATTTTCATCAGATGATGATCAACCTCTAGTCAAAACTATTAAGAAACCAACAAAGCCAGTAATTAAAACAACGCCGCAATTAGTGCGAAAAATTCCTACATCGAAAAAAGCGAATTTAATCCGTCTTACGCGCAGCACCCAACCATCAATGCGTTTAGAAACTCACACGGCTCGTCCTATTCGATTAGAATCGCACACAACGCAACGTCCGTCGCGAAAGACGAAAGAAGCTGCCGCTCTTTATATGGAATTGTTAGGCCGTAAACTGGTCAATGATGCCGAAGTCGATGAAGACAATGCGTCAATTGATAGTTTCCCTGAATTACCAAACGTACGACGTACAGAACAACGCGAAAACGAAATGAAAGCAAAAGTGAAAACTACGAAAGTAGGTAAAATTAACACACGAAAAATGTCGGCAACTATTAAAGAAAAACTTCAAGATAAGTGCAACAAAACTAAACcgaaattaatcaaaaaacttCCCGTCGAAACACTTATTGACACCGACGTCGAGAAAATTGTGGACAAAGAGGACGTTGAggaaaaagaaacaaaaaaagtaTTACGTTCAAAAGTAGATCGCAAAACGAATACGCAAAAAGCAAAGACGGAGAAAACGATTATTGCAGCAACAAAAAATGTTGATAGTTTTAGCGATTCTGATGAGGAACCACTAGTGAAATTAACAATTCAAAAGAAAGTATTGAAAACGTCTAAAAAGCCTACACCACTAATTGCAGATTCAAAAATATCTCCAGTTAAGAAAGTTGAATCAAATTCAAAGACTTGTTCAATGataaagaaagaaacaaaaattgtgcCAAAATTAGAATCAGACGATGAGGAAAAAGCATTTAGAGGATTTATTAAAACTGATGAAGTTAAAACGATTAAAAAGATACAGGAAGCAAATTCCACTTCTGAGATTACTTCTTCACCTTGTGCCGATCTTCTCTGCAAAGATATTGGACGTCGTTTCGGTAAAGGTAAAGTTAATATGTCAACGGAACAAATCGAGAAATGGCTAAAAGACAGCGCATTAGCGGGCGAGTGTATCAAAAAAGAAGAGTTTGACAAGAAGTATGAAGATGATATATTGAAGTATGAAGAAAAGGATGAATGTAAATCTGATAGTAAAGCAAGTACAATCGAATCACCTATCGTAAAAATTGTTCCGCAGTCGAAAGCTAGGGCAATTAAAGTGACTCCAAAATCAAAAAAAGTATTGAAAACATCGCCCGTACAAAGTATAAAAACATGCACGATTACtccaataacaaataaaatccaGTTGGCAAACGAGCGGAAATACACATTTCAACAACGTCGTTCTATTTTAAGCAAAGATCGGAAAGATATATCGCCAAATACCAAAGCGTTTTCACCGGATAATGAAAGTAGTGTTTACGCATTTGAAGCAGAAATGGAGATGCCTGTTAACACTCCATTTAGAAGCCATGTCCGAAGACCTTCCAGTACAGCAACATCTCGTTCAGAAGATGAAGTAATAAAAATCGAGGATGAAGACCGAAGAAAGTCACATGACGGAAAATTCAGATTGCCTGCAGTTGTGAAAACAACTAAAAAACAAGAAGTCTCTTTGACGCTCTCCGCAGATGAAGCCAACAGCGCTTCAATAGCGGTACAAGTAAACTTAGATTCGACATTCGGGGAAAGTAGTATGGAGTGTTCGACGCAAACCGACGCCGGAGAAGATGACggccatttattttatataccatTGCAACCTACTTCTAAAACAACCAATGCACATATAATACAAGGAGTCGCTGTGAAGTTGGGAACTGAAGGTTCTGACGGACTCAATCAACGTGTAGTAATGCGAGCGAAATTAGTCACCGATCGGTTACCTATAAAACCCTTAGCCCaatcaacaaatatgtatCCTCCAATTGGAACAGTTCAACCCACTTACCGTTCGCGATTTGAATTATCAAAACCAATCGGCAAAACCATGCTGGAACTGAAATGTGATAATTTCAGTACTGATAGTAAAGTAACAGTGCCAAGTTCGCCAAGCGCGTCGTCATCATCGAGTACTAAAATCTATAAACGTGCTGTAAAACCTCGAGCTCGATCGTTGGATATGTGTTTGCCCATCAATAATACTGAATTCCCTGGTTTGAATCAACCCGCACAACTGGTTGAAGCCCCGACGTTTCATCCGTCGGAACGCGAATTCCAAGATCCGATTGAGTTCATTGAAAAGATTAGGCCGTACGCGGAAAAGTTTGGAATCTGTCGGATTATTCCTCCAGCGAATTTCAAACCAGAGTGTAAAGTTAGTGATGATATGAGGTTTACTGCGTATAATCAGTACATCCATAAAATGCTGCATCGATGGGGTCCcaattttaaagaatttatgGCCATCAAGAAATACTTAGCAACCCAGAGTATCACATTCACACATCCGCCATGGattggTGGTATGGAAGTAGATCTACCGAGACTCTACCAAACTGTCCAATCACTTGGTGGTTTAAAAGAAGTTATAGAAAAGAAACGTTGGCCTAGAGTGGCGGAAGGTATGAAAATACCAAAATCCGCCCAAGATCGGGTCACAAAACTAGatgatatttattgtaaatatttactgcCATACGACACTCTATCACctgCTGAACGTCAAAAACTCTTCGACGACGTTGAAACAGAATGGGCACAGCGGGAATCGCGCAATTTGTTAAGATCCCAACAACAAAACAGCACCAATGTATCAGTAGTAAATTCAAATGACTCGGATTCTGAGTCAGGTGATGAAGAAACCGACGAATGCATGGTGAAAGGACGCAACATGGCGCTAAACGCGTTTTACCGTATTGCTAGGAATACAATGAGCATGTGGTTCAAATCGTCTGAACCAAGTGCTCAAGAAGTTGAACAAGAATTCTGGAAACATGTCACTACAAGACAGAATCATTTGTGCGTTAATTCGGGCTCAATTGATTCAAGTGGTTGGGGCTATGGGTTTGCGAGTAGTAAAAATAGTCCTTTCGGGAAGCATCCATGGAATTTGAAGATTCTCACCAATAATAGTGGATCGGTTTTACGAACAATGGGACCAATCATGGGTGTAACAGTTCCAACACTTCATGTCGGTATGGTATTTAGTGCATGTTGTTGGTACCGGGATCCTCACGGCTTACCATGGATCGAATATCTACATACAGGCGCCAATAAAATCTGGTACGGTATACCGTCTTCGTTAAGCGACCTCTTCCGGGCAGCTTTAACAAAAATCGTACCAAGTTATTGTCGCAACAAAACCTTATGGTTAACATCCGACACAGCTATGGTACCGCCGAGTTTACTAGTTCAAAATGGTGTTAGCTTATGTCGAACAGTCCAAGAACCTGGTCAATTCATAATAGTTTTCCCGCGAGCATTTACATCTAGTATTTGTAGTGGTTACGTAGTATCGGAAAGTGTATATTTCGCGCCGCCGAGTTGGTTGCAAACCGCACAGCAAGCGTTCAAAGACATTCGGGAAAGTTGTGAATCGTCCATGTTCTCGTTTGAGCGTTTGTTGTTAAGTATTTCCACGGATTCGCGGTCGAGTTCGGACGTTCTAAAGCGAATCCTGCCAATTATGTTAGAATTAAAAGCACGTGAACAAGACGGCCGAGAGAAATTGAATGCGCTTGGATTGAAACTGATGGAGCGCTTACCGAATTCTAGTAATGCTAATgcgaagaagaaaaagaaaatacaggAAGATGATGGCGAATATGAGTGTGAAATTTGCCGAAGTAGTCTATACGTATCTCTAGTCATTGATTCTCAAGAAGAAGGCGTCTTTTGCTTAGAACACGCCATTGACCACATCAAATCTAAACCCGATCAACTAAAacattgcaaattattattcacTTACGATACACAAGACCTTGATAATTTACTggagaaaattaaattaaatatcgaaACAAAATCTATTAAGCGGCCAGGTAAAGTTGCATATAAGGTTCCAATCTctttacttaaataa
Protein Sequence
MVVSRNDVKRKRKDSDTTVDTLPESPKRTKVHAQRKFAQGSNVSSPVITPVKEIDRDKVKIDVLPTPSELLPIKRPNTEDFLTFLCFRGTPILPPKLNYFNTTSTLASQNVATETEAKTNEATTASTTNDSQENESSERPFIAFGVRKRADPFINNKLEKKRRHAIALQALRRKYQEQRMAKIRAVTIEKMSEGIKIKSKNLVQTRSVTKQVRQAAPTEKRKLKVVTKRVKITNRTAVKRPILKQKMCLRSRTRLIPRDIPVPVKKKITKVVIPTKIQTVKKDSSSEFSSDDDQPLVKTIKKPTKPVIKTTPQLVRKIPTSKKANLIRLTRSTQPSMRLETHTARPIRLESHTTQRPSRKTKEAAALYMELLGRKLVNDAEVDEDNASIDSFPELPNVRRTEQRENEMKAKVKTTKVGKINTRKMSATIKEKLQDKCNKTKPKLIKKLPVETLIDTDVEKIVDKEDVEEKETKKVLRSKVDRKTNTQKAKTEKTIIAATKNVDSFSDSDEEPLVKLTIQKKVLKTSKKPTPLIADSKISPVKKVESNSKTCSMIKKETKIVPKLESDDEEKAFRGFIKTDEVKTIKKIQEANSTSEITSSPCADLLCKDIGRRFGKGKVNMSTEQIEKWLKDSALAGECIKKEEFDKKYEDDILKYEEKDECKSDSKASTIESPIVKIVPQSKARAIKVTPKSKKVLKTSPVQSIKTCTITPITNKIQLANERKYTFQQRRSILSKDRKDISPNTKAFSPDNESSVYAFEAEMEMPVNTPFRSHVRRPSSTATSRSEDEVIKIEDEDRRKSHDGKFRLPAVVKTTKKQEVSLTLSADEANSASIAVQVNLDSTFGESSMECSTQTDAGEDDGHLFYIPLQPTSKTTNAHIIQGVAVKLGTEGSDGLNQRVVMRAKLVTDRLPIKPLAQSTNMYPPIGTVQPTYRSRFELSKPIGKTMLELKCDNFSTDSKVTVPSSPSASSSSSTKIYKRAVKPRARSLDMCLPINNTEFPGLNQPAQLVEAPTFHPSEREFQDPIEFIEKIRPYAEKFGICRIIPPANFKPECKVSDDMRFTAYNQYIHKMLHRWGPNFKEFMAIKKYLATQSITFTHPPWIGGMEVDLPRLYQTVQSLGGLKEVIEKKRWPRVAEGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDDVETEWAQRESRNLLRSQQQNSTNVSVVNSNDSDSESGDEETDECMVKGRNMALNAFYRIARNTMSMWFKSSEPSAQEVEQEFWKHVTTRQNHLCVNSGSIDSSGWGYGFASSKNSPFGKHPWNLKILTNNSGSVLRTMGPIMGVTVPTLHVGMVFSACCWYRDPHGLPWIEYLHTGANKIWYGIPSSLSDLFRAALTKIVPSYCRNKTLWLTSDTAMVPPSLLVQNGVSLCRTVQEPGQFIIVFPRAFTSSICSGYVVSESVYFAPPSWLQTAQQAFKDIRESCESSMFSFERLLLSISTDSRSSSDVLKRILPIMLELKAREQDGREKLNALGLKLMERLPNSSNANAKKKKKIQEDDGEYECEICRSSLYVSLVIDSQEEGVFCLEHAIDHIKSKPDQLKHCKLLFTYDTQDLDNLLEKIKLNIETKSIKRPGKVAYKVPISLLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01039013; iTF_00872843;
90% Identity
iTF_01039013;
80% Identity
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