Ning017440.1
Basic Information
- Insect
- Nebria ingens
- Gene Symbol
- Bgb
- Assembly
- GCA_018344505.1
- Location
- JADQWA010000492.1:155109-158184[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-48 7e-44 149.4 0.7 1 99 35 130 35 136 0.92
Sequence Information
- Coding Sequence
- ATGCACCATTCGATGAACGATCCGACGGCTGCCCTCGCGGGTATGCTGCCGTTCGATTCAATCGGATTATACGAGCAACCGAAACCGCGGTTTATATTTAAAATGCCCCGGGTTGTGCCCGAACAGAAAACAAAGTTTGAGTCGGATGAACTGTTTCGGAGGTTGAGTCGTGAAAGTGAGGTGAGATACACAGGATATAGAGATCGACCTCAAGAAGAACGTCAAGTTCGGTTTCAGAATGGATGCCGAGAGGGACACACCGAAATCGCATTCGCGGCTACTGGAACCAACCTACAACTTGTCTTCGCCACACCGAATACCGCTGGGTATACTCAAGACCGGGAGTGTGATTTCGACAAAGAACACGGCAAGTCGCGCATGCATCCCCAGTTATTACATCGAAAATCAACCCTTCCCGATAAATGTAGTCGATTTGTGTCGGTTGCATCACCTGGTTGTCCCCCGACGCACCAGATTCAATATCGAAAGAGTGATTTGTCATTGAGCCCCCTTCTTGGTTGTTTATTAAAAAAAATAGAAGAAGAGGAAGTGTTGATCCTTTGTAGTAAACGAGTAGGCGCCCGACGGTAA
- Protein Sequence
- MHHSMNDPTAALAGMLPFDSIGLYEQPKPRFIFKMPRVVPEQKTKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNGCREGHTEIAFAATGTNLQLVFATPNTAGYTQDRECDFDKEHGKSRMHPQLLHRKSTLPDKCSRFVSVASPGCPPTHQIQYRKSDLSLSPLLGCLLKKIEEEEVLILCSKRVGARR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -