Nbre009584.1
Basic Information
- Insect
- Nebria brevicollis
- Gene Symbol
- Nfat5
- Assembly
- GCA_944739395.1
- Location
- CALYJC010000149.1:438729-441175[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.03 3.5e+02 2.0 0.0 85 113 114 144 81 171 0.78 2 2 1.3e-32 1.5e-28 100.8 0.9 1 168 180 339 180 340 0.94
Sequence Information
- Coding Sequence
- ATGAAGATGACAATTGCGACAACACCGACTATGACTCAAAGGATTCATCACAGAAAGGTCCTTCGGCTTGCCGGCAAACGACCTGGTACACACCATCACAGATCCTTTGGGCTTGGTACCGGCAAAGGACGACAGTCCAGAGTTCCCGTGGACACCACTTGCGAAAATAGCGATGATAGTGGATTAGGATTTGACCATCATATGGACATGCGGTCGCACTATGGTGACCGTAATGCCTGGACTGACGAAGCTCCTGAAATAAAACGACGTAAACTGGACCTGAAAGTTGAAAATGACGACACAAATGACGGTTATTGTTTTCCTGAATCACTTAAGACTTGCAAAGAAAATAACTCAATTATACGCACTATTCCTTGTTCTGGTATACAAAATGTGACTAGAAACACTGTACAAAATGTTAGTtctaataaaagtataaatcGATGTTTACCACTGGTAGGCAGACGAGCCCCGGTTACTGGTCCGGTTACACTAACAACACAACTGAGTAGTACTTCCAGAAATAgtaaagtatatttacaaattatgtGCCAACCTGAACAACAACACAGAGCTCGATATCAAACAGAGGGAAGTCGCGGCGCGGTGAAAGACCGAACCGGCAATGGTTTTCCAATCGTTAAACTTATCGGTTACGACAAACCCACCACCCTACAAATTTTTATTGGAACTGACTTAGGAAGAGTTGCACCACATATGTTTTACCAAGCTTGTAGAGTTAGCGGAAAAAATTCCACATCGTGTATAGAGAAGAAAATTGATGGGACAATTGTTATCGAAGTCGAGTTAGAGCCTACTAAAGAAATGGTTGCcacttgtgattgtgttgGTATTTTAAAAGAGCGAAACGTCGATGTTGAACACCGGTTTCCCGAGCAATTGAGTCCGCGTAGTAAAAAGAAGTCAACGAAGTGTAGGATGGTGTTTCGGACTTCCATTACACATGATGATGGAAGTACGGAAATGCTTCAAGTTTGCTCCCAACCTATAGTTTGCAcACAACCACCAGGTGTTCCTGAAATTTGTAAGAAATCCTTGAGCACTTGCTCCGTTACTGGAGGTTTAGAGTTGTTCATCTTAGGGAAGAATTTTCTAAAGGACACCAAAGTCATTTTCCAACAGGCCATCTACGAACCAAGTGGAGAACGTTCAGAAATCCTGTGGGAAGAAATCGTAGTTCCTGATAAGGAGTTTCTACAACAGACGCATTTGGTATGCGTGGTACCGCCTTATAAGCCACAGGACATAGCAGATCCTGTGCAAGTGCGTTTGCTAGTCATGTCCAGTGGTAAACGCAGCGAAGCACATGCCTTTCAATATACTCCAGTTGTAAACACAGTTGTGGTTGCAACCACCACCCAACCCACGGTAACGGGCGACACTGGTAAGATCCATTATGTTTACTTCAAATCGTCTCGAAACAATTTCAGTTTGGTGATGCATCGATAA
- Protein Sequence
- MKMTIATTPTMTQRIHHRKVLRLAGKRPGTHHHRSFGLGTGKGRQSRVPVDTTCENSDDSGLGFDHHMDMRSHYGDRNAWTDEAPEIKRRKLDLKVENDDTNDGYCFPESLKTCKENNSIIRTIPCSGIQNVTRNTVQNVSSNKSINRCLPLVGRRAPVTGPVTLTTQLSSTSRNSKVYLQIMCQPEQQHRARYQTEGSRGAVKDRTGNGFPIVKLIGYDKPTTLQIFIGTDLGRVAPHMFYQACRVSGKNSTSCIEKKIDGTIVIEVELEPTKEMVATCDCVGILKERNVDVEHRFPEQLSPRSKKKSTKCRMVFRTSITHDDGSTEMLQVCSQPIVCTQPPGVPEICKKSLSTCSVTGGLELFILGKNFLKDTKVIFQQAIYEPSGERSEILWEEIVVPDKEFLQQTHLVCVVPPYKPQDIADPVQVRLLVMSSGKRSEAHAFQYTPVVNTVVVATTTQPTVTGDTGKIHYVYFKSSRNNFSLVMHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01040626;
- 90% Identity
- iTF_01040626;
- 80% Identity
- -