Basic Information

Insect: Nasonia vitripennis
Gene Symbol: -
Assembly: GCA_009193385.2
Location: NC:2175052-2203431[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.22 19 5.5 5.8 1 23 341 363 341 363 0.97

2 19 6e-05 0.0051 16.7 0.2 1 23 412 434 412 434 0.98

3 19 0.0079 0.67 10.1 0.5 1 20 491 510 491 512 0.94

4 19 0.0072 0.6 10.2 2.6 2 23 553 574 552 574 0.97

5 19 0.0027 0.22 11.5 0.4 1 23 620 642 620 642 0.97

6 19 0.00022 0.019 15.0 0.1 1 23 648 670 648 670 0.98

7 19 0.0011 0.09 12.8 4.0 2 23 710 732 709 732 0.90

8 19 0.33 28 4.9 0.8 2 15 741 754 740 763 0.78

9 19 7.7e-05 0.0065 16.4 1.2 2 19 796 813 795 818 0.89

10 19 2.8e-05 0.0024 17.8 0.2 1 23 851 873 851 873 0.93

11 19 0.1 8.5 6.6 0.0 2 20 930 948 929 948 0.95

12 19 0.00051 0.043 13.8 0.1 2 23 967 988 966 988 0.97

13 19 0.0021 0.18 11.8 5.0 1 23 1012 1034 1012 1034 0.97

14 19 0.004 0.34 11.0 4.4 1 21 1053 1073 1053 1077 0.89

15 19 0.014 1.2 9.3 0.4 2 23 1136 1158 1135 1158 0.93

16 19 0.003 0.26 11.4 1.0 3 23 1187 1208 1186 1208 0.90

17 19 0.00054 0.045 13.7 0.2 1 23 1215 1239 1215 1239 0.93

18 19 0.05 4.2 7.5 0.8 1 23 1244 1267 1244 1267 0.94

19 19 0.008 0.68 10.0 0.4 3 23 1299 1320 1297 1320 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.22	19	5.5	5.8	1	23	341	363	341	363	0.97
2	19	6e-05	0.0051	16.7	0.2	1	23	412	434	412	434	0.98
3	19	0.0079	0.67	10.1	0.5	1	20	491	510	491	512	0.94
4	19	0.0072	0.6	10.2	2.6	2	23	553	574	552	574	0.97
5	19	0.0027	0.22	11.5	0.4	1	23	620	642	620	642	0.97
6	19	0.00022	0.019	15.0	0.1	1	23	648	670	648	670	0.98
7	19	0.0011	0.09	12.8	4.0	2	23	710	732	709	732	0.90
8	19	0.33	28	4.9	0.8	2	15	741	754	740	763	0.78
9	19	7.7e-05	0.0065	16.4	1.2	2	19	796	813	795	818	0.89
10	19	2.8e-05	0.0024	17.8	0.2	1	23	851	873	851	873	0.93
11	19	0.1	8.5	6.6	0.0	2	20	930	948	929	948	0.95
12	19	0.00051	0.043	13.8	0.1	2	23	967	988	966	988	0.97
13	19	0.0021	0.18	11.8	5.0	1	23	1012	1034	1012	1034	0.97
14	19	0.004	0.34	11.0	4.4	1	21	1053	1073	1053	1077	0.89
15	19	0.014	1.2	9.3	0.4	2	23	1136	1158	1135	1158	0.93
16	19	0.003	0.26	11.4	1.0	3	23	1187	1208	1186	1208	0.90
17	19	0.00054	0.045	13.7	0.2	1	23	1215	1239	1215	1239	0.93
18	19	0.05	4.2	7.5	0.8	1	23	1244	1267	1244	1267	0.94
19	19	0.008	0.68	10.0	0.4	3	23	1299	1320	1297	1320	0.95

Sequence Information

Coding Sequence: ATGGAGGACGTCGTCGAGATCACTGCTGGCTTGGAAAATGCCTGCCGCCTCTGCCTGACCACCGAGCAAACGAGGTCTTCGATATTTGGCGTGCCGCACGTCTCCGTGCCCTTCGCTGAGAAAATACGCGCTTGTCTGTCTATACAGGTTTCTTCTAATGACAAATTGCCGACACTAGTATGCAATACTTGCATCAAAAATATCAACCACTGGCACTCGTACAAGGATACCTGTCTGCGCTCCCAGGAAAAACTCCAACAATGGCTGATGTCAAAGCAGAACACGACAGCTGTGcCAACGGTGACCATAAAAGAAGAGCCAATGGATGAAGCTGCTCCAAATAATGCACAAAATGAATCTAGTGCTACTAATCATGCTGTACAAAATGGTATGGATGTTGACTCCGAAACTAATCCTACACTTACCACTGGTCCGGAACTGGAGAAATCCTCAAAAATTAGTGAGATGGATAGGGCGATGATTCCAGAGATACAAATCAAAACTGAACCTTTAGATACAGAAGATGAAGATGattgcaacgtggatgtagaGTCAGTAAATAGTGGAGAACTACTAATCAACCCAATGGCAGTGGCAGCCAATAATGTGAACACTGACAGAATAATGGAAGCAGATTCTACACAAAAATTTGGCGCAAGAAGGTTTGCAACAAGAAAGAAATATCGACGTGGACCTCATACACACTTTAGAGGAGCCAAGCTATTCAAGAAAAAATGTGTGCATTGTAAAATTTACTTGCATTCAAAACACTCATTCATGCAACATATGTCTCGATACCATGGCATTGTCAATAGTTTAGGATCAAATGAAACCGTCAAAGTTGTTAATCAACCATCAGTGAACAAGCAAAAATCAAAACTCTCTGAGCATCCCGATAACGTGGAACTTTTGGCAGAGATTCAGCAAGAAAGTAATCCTGAAGACGCGGAATTTGAGCAGATGATAAAAACTGATCCTCTAACACCAATTCAAAAGAACATTATTGGCCAGTTGAAAACTTTCTCTTGCTACTCGTGCAAACAAACTTTCTTTGATAGAAGACACACTTTAAATCATATCAGACAGCATATGCCAGATTTACGTCCATACACTTGCATTGCTTGCCTTACTGAGTTCTCTGACAGATCAATGTACAAACTTCATTGCGGTGCATCttttgaatgtgctatgaaaattGCTCTTGTAGTGCCTAAAGGAGGCAATGAAAAGTACTTTACATGTAACATGTGTCTTCGACCTTTTGCTAATCGAAGTGAATTGTTAACGCACTTAGCCATGCATGCTGATAAGCAACACAAGCAGCTAGCCCAACAACCTGTGAGGTCGCCGCCAAAGTCAAATCCTATTGCGTCGCCTTCACTAGCTCCTACAGCGGAGTCTTCGCCTTCAAAACGTTCCATTACTAACAAAATTGCAGGACCATACATGAATGGTGATCCAGCCCACAATCACACATGTGACCTGTGTGGTATGATCTACAGGTACAAGCCTAACATGTTCAAGCATCGCGAACTATGCTCTTCTCTGGCAGAAAATATTCGCACATCCTACAGATGTGCTCACTGTAGCATGACCTACCTTGTGTACAAAAAGTTCTATTCGCACGTGTTCAGCGATCACAAGAAGCGTGAGATCACTTGCTTTACATGCCACGAAAGATTCCCCACAGCCGATGAATATCTCACACATCACGAGACGCATCGCGTTTTTTCAAAGGACAAAGAAACGGCCAATGAAGTCGCGAGtgagcagcaacagcaacaacaggaGAACGACAGCCCGAAGTTGAGCGACACGAAAGCTTCCGAGGATCCTTTGAATGCCATTGAAAAGCCATTTAATTGCGCTCTTTGTAGCGAAAGATTCGCTACAAAACTTGAACTCACGGAGCATCGCAATCTCCACCTTAAGGTAAAGATCTACTCGTGCGTCATATGTCGTAGCATGTTTAGCAGCTCCGGAGCTCTTGAGATTCACATGAAGGAGCACGGTATTGATGACGCGGTCGAGCAGAACGCCAATAGCTCATGCATCGAGTACAACTCGCAGAGCAGTATGAATGAGTCTTCTATGTCGGCTACGTCTGATCCAGGAGGAAAATTCCATCATTGTTACCCGTGCGGTAAAAACTTTTCTAACTATGCGAATCTGAAAAGACACGAGAGGAATTTGCATATTAAGAACATGAAGCGCCGCTGGAGCTGCGACGTTTGTAAGCGACGTTTCAAGTCATCCCAAGCTCACGACGAGCATGTATTGTCGACTCACGGAATGCATCCATCTCAATTACAGCGTCAGTCGCAAACGCCACCACAGGTCGTACCGACACCCCAGTTTTCTGCTGCCACTGGCAAACCCTTGATGCAGTGTCCGAAGTGCCCGAAGACCTTTACCTACCAAGGAAATCTCATTCTTCATTGTCAAAATGTCCACAAAGAGAGTCCTTACGAACGTCCGCAATCCAGTGCTATGCGACAGTCAGCTCCACCGGCTCCCCGCCGTGCATTACCTATCGTAACAGCGCGTGGTTACGCTTGTGACATCTGCGGTAAAAGCTTCCGCGAGGAACAGTCTCTTAAGACTCATCGTGGTTGGCATTTGCGTTCCAACTACCGATTGAAAGTCGACCAAAACGCTAGTCTCAACGAGAAGGCTATGAGTTCTCCTGGCTACACGATGACTTCGGCTATACCAAAGCCAGCCAAGGCTAGAAAGTCTTTTCCCAACAATCCATCTCAGAAGCAGCTGAGTGCCCTCGCGAGTTTGCAATGCCAGGTTTGTGACGACCGCTTTGCTGACGTGGAGATGCTGAGGAAACATCTTTGGGACGTGCACTGTGCTCGCAATAAACCCGAGAAAACCTTCACTACAGATCTGCAGTGCGAACTCTGCACTAACAAGTTCCCAGACGAAGAAGAATTAGAGAATCATATGAAGTGGCATGCTCAGAATCCCATACTCGGTGGACCGATAAATAATAGAGTTCCagtttctgaagtccctaaaAAGACTTTTTGTTGCGACGTTTGCGGTAAGTACTACAGCAATCGTAAGCTCTTCTTGCGTCATAAAAAACTACACAAGGTCTTACCTGCTAGCACCATGATGAACTTGCATTCACTGCAAACTCGACGTCATTACTGTCACGCTTGCCAAAAGAGCTTCGCCACCGAAGCTTCACTCCGGCGACACAAGGCTTCGCCTTGTCATCAGAGCGCAACGCGTTCACAGATGCAAGCATCAAAGAAAATAACGACGACAGCACTGGTGCATCATCCACCGCCGGATCCTATGCCTGAAATCAAAGACGAGCCTCCCGAGATGGATTACTCCAATCTACCAACACATGGCGCTCATGGGCAACTTTTAAAGAAAAGACCGGTTACTTGCCACATTTGCAATATGATATTCCCGAATATGAGTGTACTCTACCAGCACAAGCAGCTTGCGCACAAGCAATCCGCTGTTTCCAGTAAAAGTCCGGCCCCGCAGCAGAAGGATTGCGTACCGGTCGCCAGCAACCAAGGTCTCGTCGCCTGTAACCTATGTGGCAAACAATTCCCTGGAATTTCGAATCTGAAGCAGCACTTCGCCCATAAGCACAAGACCAAGGGAGCCTCGTTCCCGTGCTATGCGCCCGGTTGCAAGCTAGTTTTCAGCAGCCTTAGTTCGTTGAAGAACCACGAAACGACGCATTCGAGCATGATATTCAACTGTCTGTTGTGCGACCGACACGTGTTCTCCAGGGCCGCAATGACCAAGCATATGCTAGCCATGCACAAGCCCATCTACCAATCAGGGGCAGACAAGAGTACTCTCTGGACTGAGACGGATCTGACGAATTATACTATAAAGAACTGTCAGAGCACAGCTTGTCCCAAGTGCAAAGTTAAGTATCCTAATTTGCGAGCACTAAAGATTCACTATCTCAAATTCCACGATAACAAGGCGCAGTGA
Protein Sequence: MEDVVEITAGLENACRLCLTTEQTRSSIFGVPHVSVPFAEKIRACLSIQVSSNDKLPTLVCNTCIKNINHWHSYKDTCLRSQEKLQQWLMSKQNTTAVPTVTIKEEPMDEAAPNNAQNESSATNHAVQNGMDVDSETNPTLTTGPELEKSSKISEMDRAMIPEIQIKTEPLDTEDEDDCNVDVESVNSGELLINPMAVAANNVNTDRIMEADSTQKFGARRFATRKKYRRGPHTHFRGAKLFKKKCVHCKIYLHSKHSFMQHMSRYHGIVNSLGSNETVKVVNQPSVNKQKSKLSEHPDNVELLAEIQQESNPEDAEFEQMIKTDPLTPIQKNIIGQLKTFSCYSCKQTFFDRRHTLNHIRQHMPDLRPYTCIACLTEFSDRSMYKLHCGASFECAMKIALVVPKGGNEKYFTCNMCLRPFANRSELLTHLAMHADKQHKQLAQQPVRSPPKSNPIASPSLAPTAESSPSKRSITNKIAGPYMNGDPAHNHTCDLCGMIYRYKPNMFKHRELCSSLAENIRTSYRCAHCSMTYLVYKKFYSHVFSDHKKREITCFTCHERFPTADEYLTHHETHRVFSKDKETANEVASEQQQQQQENDSPKLSDTKASEDPLNAIEKPFNCALCSERFATKLELTEHRNLHLKVKIYSCVICRSMFSSSGALEIHMKEHGIDDAVEQNANSSCIEYNSQSSMNESSMSATSDPGGKFHHCYPCGKNFSNYANLKRHERNLHIKNMKRRWSCDVCKRRFKSSQAHDEHVLSTHGMHPSQLQRQSQTPPQVVPTPQFSAATGKPLMQCPKCPKTFTYQGNLILHCQNVHKESPYERPQSSAMRQSAPPAPRRALPIVTARGYACDICGKSFREEQSLKTHRGWHLRSNYRLKVDQNASLNEKAMSSPGYTMTSAIPKPAKARKSFPNNPSQKQLSALASLQCQVCDDRFADVEMLRKHLWDVHCARNKPEKTFTTDLQCELCTNKFPDEEELENHMKWHAQNPILGGPINNRVPVSEVPKKTFCCDVCGKYYSNRKLFLRHKKLHKVLPASTMMNLHSLQTRRHYCHACQKSFATEASLRRHKASPCHQSATRSQMQASKKITTTALVHHPPPDPMPEIKDEPPEMDYSNLPTHGAHGQLLKKRPVTCHICNMIFPNMSVLYQHKQLAHKQSAVSSKSPAPQQKDCVPVASNQGLVACNLCGKQFPGISNLKQHFAHKHKTKGASFPCYAPGCKLVFSSLSSLKNHETTHSSMIFNCLLCDRHVFSRAAMTKHMLAMHKPIYQSGADKSTLWTETDLTNYTIKNCQSTACPKCKVKYPNLRALKIHYLKFHDNKAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286670;
90% Identity: iTF_00287503;
80% Identity: -