Basic Information

Insect: Nasonia longicornis
Gene Symbol: -
Assembly: GCA_000004795.1
Location: GL280857.1:143292-146333[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-09 4.3e-06 26.1 0.2 15 74 807 862 804 865 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-09	4.3e-06	26.1	0.2	15	74	807	862	804	865	0.90

Sequence Information

Coding Sequence: atggaGCAGAACAATTCGTCACCGTTTGCGAATTTTGTGAAATTAAATGCAGAAAATTACGATAGCTGGAAATTAGACATGAAAGTTTTATTGATAGACAGAGGATCATGGGAATTTGTTGACGGCAGTGCGGTGGCATTAGAGGATAACGCGTCAAATACAATAAAAGTCGATTATAAGAGAAGGAAAGAACGTGCCTACACTACTATTTACCAAGGAATAGAGAAACAATTCCATACGTTAATCGCAAATACGCTCGACGGGAAAGAAGCGTgggaaattttaaaagagaatttCGAACCAAAATCGAGAGCAAGACTTGCTGGGCTCGTGGACGAATTCTATGAGATGAGATTTGATCANGAGAAAGAAAGTATTGgcatattttgcaaaaaagttaatgaaaaagCAATGTTGATAAAAGATGCAGGTTTTGAAATACCGGAGATTTTGAGGTGCTTTCAATTAATAAGAAGACTACCAGGAGATTACGACAACCTAGTGCAAATTCTGTATAGATCTGAAGAAAGTGACTTTAAGTTTGCGAATATTGAAAAGCAATTAATAGCAGAAGAAGGCAGAGTTAAACAGAAAAGGAAAGATGAAGGACTGAACGACGTAGCGAACGCATACTATANAAGTGGAAATAAAGAAgcaaagaataataatactaatatGAGATACAACAAAAGCAACAATAGGAGTGAGAATAAGCAGAACAAAGAGCAGCAATACAAGAAAAACTATAGAGACGAGGTATGTCACTATTGTAAACAGACTGGTCATATAAAAAGGTATTGTCCTACtttaaagagaaaagaagaaggtaAGAGAAATTTTCACCGCAATGATGATAACAAAGCCAATAATAGTAAAGCCTTCTATATAGaggataaaattaatacatcaGAAATGAACGAATGTCAAGAAGTACAATTGAATAATGTAGCAGAAGACAAGTCTGATGAGTGGCTGATCGATAGTGGAGCAACGTCTCATTTTTGTGTGAATAAATCACTTTTTACGAATTTCTCAGAATTGCCACGCACGGAGGTCTTAGTAGGAGATAAAAATGCAACATCATACGTAACTGGAAAAGgaaacattatattttacttGAAAGAAAATGGAAGATTGATAGAAATAAAGCTGAAAGATGTCTTGTACCCGCCGAACATGCGGAGAAATCTGATTAGCGGAGCATGTATGGACATAGCGGGCTTCAAAAACATATGGAAAGATAATAAGATGGaaatttacaatgaaaaaggtaaatattattttactgcacacaggaaagaaaaattttacagaattGAAGCTTAttatgatttaaataataacaacgaaGTATACAATGTGAGTCAAAGTGACGCAATGAAAGTACATAGAAAATTCTGTCACATGAGTATAAATACTATCAGTCAAATGGAGAAGAAAGGAGTTGTAAGAGGCATTGAAAAGGTAAATAATGAAGAATTTTCATGTAAGATATGTCCTGTAAGTAAAGCAACGCGTTCATCCTTTAAGACGATAACAAGGGTAATGACAAGAGATATACTAGAAAAGGTATACATGGATGTATGGGGACCGGCTCCAGTAAAAACAGTAGGTGGaagtaattactttttttcaataattgacGATTACTcaagaaaagtttttatatatacaatgGAGAGAAAATCAGaggtattcaaattttttaaattatttctcaCTGAAGCCGAAAGACAAACANGTAGAAGAATCAAAACGGTACGTACGGATAACGGCATGGAGTTTTGCCACAGAgaatttgaagattttttgAAGAATATGGGAATAGTACCAGAGAGGACGTCAACGTATACACCAGAGCAGAACGGAGTCGCAGAAAGATTTAACCGTACAGCATTAGAAGGTGTGAGATCAATGCTACAAGATAGTGGTTTGCAAAAGAGGTTTTGGGGAGAAGCGTTACACGCATTTGTGCATGTGAAGAACAGATGCACGCATACGCTTCTGAAGGATCAAACACCAGAAGAGAAATGGTGGGGAAGGAAACCTTCTGTTCAACATTTGAAGATTTTTGGATCGCTCACTTACGTTTATACGCCAAAACCAAAGCGAAATAAATTAGAACCAAATGCAGAATTAGGAATTCTGGTCGGATATGCAGTGAAAACAAAAGGATATCGAGTATGGTTGCCAAAGACGAGACAAGTTGTAGAGTCTATTCATGTAAAGATAGAAGAGAATCAAAATGGAGTAGATACATTGTTTGGTAGAGATAAAAAGTatgctaataaaaataatttgattaattttgatgACGAAGAAATAATTGAAGATGAAATCGAAAGAGACAAAACAATTAATGATACAGAGAGGCAAAGTAAACAAGATAATATACCAAACGAGATAGATATATCGGCATGGAAAAGAGTTGAAAGACCAAGAAAATCAGAGAGTCGAACcgacgtttattattatactccaGGTGACAATATTAGAATCCGATCACTCAATGAAGCTAAGAAATATTGTGAAGATAGATCATTACATTTTGATCCAAGCAAATTCTGTTTTAAACCTATGACACCGACGGATGAATCAANAGAAGAAGATATAAATCAAAGAATAAATTTGGAAGAGATTGAAACTGTAATGTATAAAGAAGAAGTCCTGTACGTCGATATGCCCAGAACATATGAAGAATGTCAACTGTCGCCGCAGAAAGAAGAGTGGAACAAGGCGATGCAAGGAGAAGTAGACACAATGAATGCACGAGCAGTGTGGATTCTCGTAGACCCACCTCCAGGATGTAAGGTCATAGGAAGTAAGTGGGTATACACTGTAAAAACCGatgacaaaaataatataaagaaatataaaGCAAGGTTGACTGCTCAAGGGTTTAATCAAAGACTTGGTATTGACTATTGTGATGTCTTTTCTCCCGTTATAAATTTCTCattaattagatttttcttcatattATTTGTACCGGTTTTAGCGTGGAAACATAGACAATTAGATGTAAAAGCGGCATACTTATAA
Protein Sequence: MEQNNSSPFANFVKLNAENYDSWKLDMKVLLIDRGSWEFVDGSAVALEDNASNTIKVDYKRRKERAYTTIYQGIEKQFHTLIANTLDGKEAWEILKENFEPKSRARLAGLVDEFYEMRFDXEKESIGIFCKKVNEKAMLIKDAGFEIPEILRCFQLIRRLPGDYDNLVQILYRSEESDFKFANIEKQLIAEEGRVKQKRKDEGLNDVANAYYXSGNKEAKNNNTNMRYNKSNNRSENKQNKEQQYKKNYRDEVCHYCKQTGHIKRYCPTLKRKEEGKRNFHRNDDNKANNSKAFYIEDKINTSEMNECQEVQLNNVAEDKSDEWLIDSGATSHFCVNKSLFTNFSELPRTEVLVGDKNATSYVTGKGNIIFYLKENGRLIEIKLKDVLYPPNMRRNLISGACMDIAGFKNIWKDNKMEIYNEKGKYYFTAHRKEKFYRIEAYYDLNNNNEVYNVSQSDAMKVHRKFCHMSINTISQMEKKGVVRGIEKVNNEEFSCKICPVSKATRSSFKTITRVMTRDILEKVYMDVWGPAPVKTVGGSNYFFSIIDDYSRKVFIYTMERKSEVFKFFKLFLTEAERQTXRRIKTVRTDNGMEFCHREFEDFLKNMGIVPERTSTYTPEQNGVAERFNRTALEGVRSMLQDSGLQKRFWGEALHAFVHVKNRCTHTLLKDQTPEEKWWGRKPSVQHLKIFGSLTYVYTPKPKRNKLEPNAELGILVGYAVKTKGYRVWLPKTRQVVESIHVKIEENQNGVDTLFGRDKKYANKNNLINFDDEEIIEDEIERDKTINDTERQSKQDNIPNEIDISAWKRVERPRKSESRTDVYYYTPGDNIRIRSLNEAKKYCEDRSLHFDPSKFCFKPMTPTDESXEEDINQRINLEEIETVMYKEEVLYVDMPRTYEECQLSPQKEEWNKAMQGEVDTMNARAVWILVDPPPGCKVIGSKWVYTVKTDDKNNIKKYKARLTAQGFNQRLGIDYCDVFSPVINFSLIRFFFILFVPVLAWKHRQLDVKAAYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -