Basic Information

Insect: Nasonia giraulti
Gene Symbol: zfh1
Assembly: GCA_000004775.1
Location: GL277752.1:1367598-1372569[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.059 3.9 7.8 0.7 2 23 93 115 93 115 0.90

2 7 2.7e-05 0.0018 18.4 0.6 2 23 138 159 137 159 0.97

3 7 6.3e-06 0.00042 20.3 7.8 1 23 168 190 168 190 0.99

4 7 0.00028 0.019 15.2 2.5 1 21 196 216 196 217 0.95

5 7 9.3e-05 0.0062 16.6 4.7 1 23 756 778 756 778 0.94

6 7 2.2e-05 0.0015 18.6 8.1 1 23 784 806 784 806 0.98

7 7 0.0017 0.11 12.7 4.3 1 21 812 832 812 833 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.059	3.9	7.8	0.7	2	23	93	115	93	115	0.90
2	7	2.7e-05	0.0018	18.4	0.6	2	23	138	159	137	159	0.97
3	7	6.3e-06	0.00042	20.3	7.8	1	23	168	190	168	190	0.99
4	7	0.00028	0.019	15.2	2.5	1	21	196	216	196	217	0.95
5	7	9.3e-05	0.0062	16.6	4.7	1	23	756	778	756	778	0.94
6	7	2.2e-05	0.0015	18.6	8.1	1	23	784	806	784	806	0.98
7	7	0.0017	0.11	12.7	4.3	1	21	812	832	812	833	0.96

Sequence Information

Coding Sequence: ATGTGCCGCACGCGCCCGAACAATGGCAGTCCTGAAAATCGTCATATTATGCGCATTGACGAGAGACACCTAGTGACCTTTGGTATAATCACCGGGTGCAGCGAGGACGAAGCAGGTGCCGACGCGGAGGTGGGCGGCTGCGCGGACAACGCCGTTGTGTCGAATGGCATGAAGCATTATCAGCAGCGTCTACAGCCGGTCGAGGGCGTCTCCGAGAAGAGCAACAGCCAGAACACCAACAGCAACGACATTAGCGGGCCTGGCAACAAGAGCGAGCGCTGTCCCCAGTGCGGCATCGTCTGCCGCAATTCCCGCATACTTCAGCTTCATCTCGAGGACCAGCACAAGCCCCTCAACGCTGCTTACGCCATCGACAAGCACGACCTTCAGGCCCAGTTCTCCCATCAAGTCTCGTGCAAGGTATGCAGCAAAACTTTCGCCAACGTGTACAGACTACAGAGGCACATGATCAGCCACGACGAGAGTGCGGTGCTCCGCAAATTCAAGTGTCCTCACTGTGAGAAGGCCTTCAAATTCAAACATCATCTCAAGGAGCACTTGAGAATACACAGCGGGGAGAAGCCCTTCCAATGCAGCAACTGCAGCAAGCGTTTCTCCCACTCGGGTTCCTACTCGTCCCACATGACGTCGAAGAAGTGCCTCGTGGTCAATCTCAAGAAGTCGAGGCAGAGCTCCATCGGCGCGACGGCCAACGCCGATCGCACTGCCGCCGGTAAGAAGTCCCAGTCccagccacagcagcagcagcagcagcagcatcatccGACGCTGCAGGTCAGACGCGAGGCCGAGCTGCTCGCGGCGAACAACAACACCCTGCTGCCCATCCTGCCTAAGCTGTCGCCCTCGGACTATCGGGACATCCAGCGAGACGCAGCGGGTCCTTACGATATGCCAACCCTGCTGCCTCAGATGGTCAACTTCGGCAGCTACTTCCTCCAGTCGTCGCTCGGCAAAATTCTCAGCCAGCTGCACGCCCAGCAGCAGGAACAGCAGCACCATCACCATCAGCCCCGGCAGCATCCGCATCACAACAGTCATCACCAGAACAGCCATCATCGTCTGGACGAGTCGGGCAGCGAGCACTACGACGCCCTGAGCCAGCAGAGCGAAGCTGCCCTCAGTCCCTCGACAACGGCCCCCGACTCCGAGGGCACGACTACCGAGGGTACCGAAGGTGGCAAAGAGTCTCCGGCACCGCCGCCACCGGCTCTGCATCACCTGCCGCATCCGGAGCAGTCTCAGGGCCTCGACGCCGTGAGGAGACTGCTGGAGACCGTCAATACCTCGGTCACGAAGCAGCTGCTCGAGGCCAAcgtgaaaaagctcgcgtcgtCGATCGCCATGGTCATAAAGCGCGACATGGACGAGGACTATCCGGATCAGGATAGCGAGATGTCGACCGAAGTGCCGCACTACCAGGACGATTGGTCGGCGACGGAGCAGTGCGACTCGCAGAGCGAGGGTCTGGCCGCGAAGCTCGAGGAGGTGCACCATAAAGCCGTGCCAGCGGCGGTGCCAATCGTACCGCAACGTCAGTCTTTGAAACGCAAAGCGGAGAACGGATTGTCGACGCATACCTCCGAAGCCGACagcgaagacgacgaagagCAAATGCTGCAACAGAATCAACAGGACAGCCAGAGCAacggcgccgcgcgcagggTCAGAGCGAGGTCGCTCATCGACGACGAGCAGCTTGCCGTGCTCAGAGGCTACTACGCCATAAACCCGAGGCCGAAGAAAGAGGAGATCACGATGATTGCTAACTACATCAAGTTTCCTACGCGCGTTGTGCAGGTCTGGTTCCAAAATTCCCGAGCAAGAGACCGTCGCGAAGCCAAAATACCGGCACTGGTGCCGCTCTCGAGCCTGAACAATCACGTCTTCAACGACCAGCCGCTCGACCTCTCGAAGAAAGATGTCCTCAGAACGATATCGACGGCGAAAGACTGCAGCGACGCCTCGAGCAGGCACACCGCCTCGCCCTGCGGTCCCAAGGAGGACGCGTTTGTGCCGAAGGTACTCGCCAACAACAACATCGAGCCCGAGGACGCGGACGAATCGCCCCTCGTTATTGACGAGGAAACCACCGACTCCGCCGAGGTCAAGCAGCCGCCGGCTAGCATGCCCGTCGAGGTCATCATCAAGGCTCAATCTCCGATTATGCAAACTAAGAATGACGCCGAGGCGAGGGTGAATGCGGACCCTGCACCTCAAACAGAGACGGAACAAGAGGGACTGTACTTCTGCAACCAGTGCGATAAGACTTTCTCCAAGCACAGCTCCCTAGCCAGACATAAATACGAACATTCCgGGCAAAGGCCGTACAAGTGTCAGGAGTGCCCGAAAGCATTTAAGCACAAGCATCACCTGACGGAACACAAGCGACTGCACAGCGGCGAGAAGCCCTTCCAGTGTTCCAAGTGCCTCAAGCGCTTCTCCCACTCCGGCTCCTACAGCCAGCACATGAACCATCGTTACTCATACTGCAAGCCTTACAGAGAATAG
Protein Sequence: MCRTRPNNGSPENRHIMRIDERHLVTFGIITGCSEDEAGADAEVGGCADNAVVSNGMKHYQQRLQPVEGVSEKSNSQNTNSNDISGPGNKSERCPQCGIVCRNSRILQLHLEDQHKPLNAAYAIDKHDLQAQFSHQVSCKVCSKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCSNCSKRFSHSGSYSSHMTSKKCLVVNLKKSRQSSIGATANADRTAAGKKSQSQPQQQQQQQHHPTLQVRREAELLAANNNTLLPILPKLSPSDYRDIQRDAAGPYDMPTLLPQMVNFGSYFLQSSLGKILSQLHAQQQEQQHHHHQPRQHPHHNSHHQNSHHRLDESGSEHYDALSQQSEAALSPSTTAPDSEGTTTEGTEGGKESPAPPPPALHHLPHPEQSQGLDAVRRLLETVNTSVTKQLLEANVKKLASSIAMVIKRDMDEDYPDQDSEMSTEVPHYQDDWSATEQCDSQSEGLAAKLEEVHHKAVPAAVPIVPQRQSLKRKAENGLSTHTSEADSEDDEEQMLQQNQQDSQSNGAARRVRARSLIDDEQLAVLRGYYAINPRPKKEEITMIANYIKFPTRVVQVWFQNSRARDRREAKIPALVPLSSLNNHVFNDQPLDLSKKDVLRTISTAKDCSDASSRHTASPCGPKEDAFVPKVLANNNIEPEDADESPLVIDEETTDSAEVKQPPASMPVEVIIKAQSPIMQTKNDAEARVNADPAPQTETEQEGLYFCNQCDKTFSKHSSLARHKYEHSGQRPYKCQECPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00287551;
90% Identity: iTF_00287551;
80% Identity: iTF_01035324;