Basic Information

Insect: Nasonia giraulti
Gene Symbol: -
Assembly: GCA_000004775.1
Location: GL275524.1:998586-1004663[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.42 28 5.2 0.5 1 15 711 725 711 733 0.78

2 15 0.51 34 4.9 1.0 2 23 766 787 765 787 0.95

3 15 0.0012 0.078 13.2 1.6 3 23 796 817 795 817 0.97

4 15 0.005 0.33 11.2 2.7 1 23 824 847 824 847 0.96

5 15 0.0003 0.02 15.1 1.1 1 23 853 876 853 876 0.94

6 15 1.8e-07 1.2e-05 25.2 2.3 2 23 910 931 909 931 0.97

7 15 2.4e-06 0.00016 21.7 0.2 1 23 937 959 937 959 0.99

8 15 0.002 0.13 12.5 3.2 2 23 971 993 970 993 0.95

9 15 0.018 1.2 9.5 1.5 1 23 999 1022 999 1022 0.94

10 15 0.017 1.1 9.6 2.5 2 23 1044 1066 1043 1066 0.93

11 15 0.001 0.067 13.4 1.0 2 23 1073 1095 1072 1095 0.96

12 15 5.3e-05 0.0035 17.4 1.0 3 23 1104 1124 1102 1124 0.96

13 15 0.00061 0.04 14.1 1.1 1 23 1130 1153 1130 1153 0.96

14 15 3 2e+02 2.5 3.2 2 23 1160 1181 1159 1181 0.96

15 15 0.0051 0.34 11.2 2.8 1 23 1187 1209 1187 1209 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.42	28	5.2	0.5	1	15	711	725	711	733	0.78
2	15	0.51	34	4.9	1.0	2	23	766	787	765	787	0.95
3	15	0.0012	0.078	13.2	1.6	3	23	796	817	795	817	0.97
4	15	0.005	0.33	11.2	2.7	1	23	824	847	824	847	0.96
5	15	0.0003	0.02	15.1	1.1	1	23	853	876	853	876	0.94
6	15	1.8e-07	1.2e-05	25.2	2.3	2	23	910	931	909	931	0.97
7	15	2.4e-06	0.00016	21.7	0.2	1	23	937	959	937	959	0.99
8	15	0.002	0.13	12.5	3.2	2	23	971	993	970	993	0.95
9	15	0.018	1.2	9.5	1.5	1	23	999	1022	999	1022	0.94
10	15	0.017	1.1	9.6	2.5	2	23	1044	1066	1043	1066	0.93
11	15	0.001	0.067	13.4	1.0	2	23	1073	1095	1072	1095	0.96
12	15	5.3e-05	0.0035	17.4	1.0	3	23	1104	1124	1102	1124	0.96
13	15	0.00061	0.04	14.1	1.1	1	23	1130	1153	1130	1153	0.96
14	15	3	2e+02	2.5	3.2	2	23	1160	1181	1159	1181	0.96
15	15	0.0051	0.34	11.2	2.8	1	23	1187	1209	1187	1209	0.98

Sequence Information

Coding Sequence: ATGAGTAACAACAGTTTTCTGTCCATGGATTTTGAGGAGTGCGACAGTTCTATAATCGATGGCAcgaatgctgctgctggtcaaAGTCCAGCTTTGTACGAAAAGAATAAGCACAACAATGAAAGGTCCGAAGAGGACTCGGACACGCAGGAAGGGGATATGGAGATAGTCTCAGATGTCCGGGAGgtgataaaaatgaagaaaatcaaCTTATCTGACAATGAGGATCACAATTACACTGATACTCAAACAGAAAAGTCAGATAATTCAAACACAGGCTTCACAAGTAACTTTATATATTCAAAAGTGGAAAATTCTGGGAAAGAAAAGTATATTGGattgaaaatatcaaatcTGAATGATTTAAAGAAAGCTATACCTCGATTGAAGTTGCCAACAATCCTCTCATCGACATCGTTGTCACCATCATCGTTTGTTAAAAAACCAACAGCTGTGCCTATAGAAGTTAAACAGAAATTACACAAATATTGTCGTGCCTGTGCTGGTTTGAAAGTTCCATTGATTAACATATTCAGTGTTAAAGGAAAGCAGATGCGACTAGCTCAGCAAATACAACACTTAGAAGGCATAAATGAACATGATAGCTTGTCTACTCAAATGTGTATGGATTGTATTTGTGATTTAAGAATGAGTTATAAATTCTTCATGCAAATCAAAAAagctgaaattaaattaaaatcgatttgcgattcattcaataattttccaaaaacatcTGAAGATGATGAGATGACtgatgtttttataaaaaaagaaacacccatggaaagtaataattatgaaGTTCTCGATAATGAAGGAATTAAAAGTGAGGCTGAAGATATTGATTGTACTGAAATGAATGAGATTAGTAGTATTGGAAATGATTCTTTTGAAGAATTTGATCCTGACAATCCAAACTATACAGATGAAGTtgatagtaaaaaaattacagaatCTTATATAGAACTGGACAAAAGTACAGGATCTAATATAAATACTCATAAATCTTTAAAATCTGATACTTATTCAAATAACGTGATGGAGTCTGAAACCGATTTAGACAAAGAATCTGAAACAATTATACAAGATGACATTGATAAGCACAACGAGTCAGTGTATCAATATGATGAGAGTTTGGATGCATACATCAAAGTTGAGCATTCTGAAGGAGTCCAAGAAGATGTCAAACCTGAAAATAAGTTGGTAGAAAGTAATACTACAAATGCTTCACAGACTTCCGAATCCTTCATTCCACTGACAAAATCATCTAATACCTCAAAGAGGAAGTTATCAAGTGGAAATATAAGCGATGATAGTAATGATAAACCtaataaaatagattttcaaaagttaaaagatttgaaaattccaaagtTGGACCTTCAAGATTctacaaaaatcaaaacacaAGAAGATGGAGTAATGTATGTTACTGCTAAAGGCTCTAAGCCCAATGAAGTGCTcttaataaaagtgaaaaaaatgaacaaaccAAGTGAAAAAAAGGTAGAAAAAACTCttggtaaaaaaaaaggtGATGCGATTCTTCATCAAAAAGGATATTCAAGATATGAATATGCAAACAAAAAGGATAATTCCATCGATGAACAAATAgaacaatataaaaagaaaagagttCAAATTTTAGGAGAAGTTGCAAATATGACAGAAACGGATTTTGATGAGAACTTAGAAACTAGAGTCATAGGTGGAGAGGTTTCAACTGAGATAGAAATGGAAGAACAAGAAGACGAGATGGAAAATACAGAAGAATATGTAGATCATATAGAGTTTTCTGAAACACCTTCTTTTCCATCTCAGCATGAAGCTCCATTGACAAAAATACAACAGCGCTGGAAAGATATTAAAAAGAGACATGAAACTATTCATAAAGATTTAGCAGAAGACTGCACAGATAGATTAAAAGCTCTTCTACGACAAAAAGATGAAGATATACAAGAATTTATTAGTTATTTAAAACAACGGAGAATCGTCGTATCACGTTTAAAAGATGAACATATAATTTCATTGTATGAGGCAAAAAATCATGTACTTTTGGAAAAGTTACCTCTACAATTTTTCGCTACACCAGAAGTGGATATAGATCCttttgaatttaaagaaatttttgatTGTGACTTTTGTGATGAATCTTTTCCAAGCAGGGATATGGAATATGAGCATTCGAAAATTCACGACTTCAAATTAATGCATTACTGTGAAGATTGTCAACAAGAATTTCTAACTCACAAGGGAAAGCGCAGTCATAATATTACTTGTGTACAGAAGTTGATGTGCAAATACTGTGATATGATACTAGAGTCtaaaggaaagaaaagacaGCACGAACAAAAACATTGTGATGAGCAAAATGGTCAGCTTTGTGATCTATGtggtgaaaaattcaaacatcaGGGCACATTAGATCAGCATGTGAAATCTCGACACATGCAGTTGGAAAAGATTTACAAATGTCCACAGTGCTCAAAGAGATTTGCCTTCAGGACAAAACTGACTTTCCACTTAAAATCGGTTCATACCACCAGCAGACCTTATTTATGTGAAGACTGCGGATCAGATTTCAAAAATCCAGCAAGTCTTAGACATCATAGAATACGAAAACATCAGCCAACGAATAACAAGAAAGAATGTACTGTTTGTCACAAGATGATTCCAGTCTACAGTATGTCCAAGCACATGCACACTCACAAAGCCTACACGATTCAATGTCCTCATTGTGATAAGATGTTCAAGAATACATCAACTCTGAAGCAGCACATAAGGATCCATGAAGATCAACGGCAATACAAGTGCGACATGTGCGGCGTTGGGTTTAACAGACGCGATGGTCTGAGGTTGCACATGAAAGTTCACTTAAAGGCAGATAGCAGAGGTCTGAAAGAATGCTCGTGCCAGCTTTGCGGTGAAAAGTTCCCCAATCACTCGATGCTCGTCATCCACAGAAATCGTACGCACAAAGACGGTCGGAACTACACTTGTCATATATGCAACAGGTCAATGATCTCCACACGATCGCTGGAGTGGCATTTGGCTCACATACATAACGAAACGATGCCAGGCATCGTCAGGGATGAATCCAGCGTTGATGCCGAGACCAAGCGAGTATCTTGCTATCATTGCGACAAGACCTTTAAAACCGAGATGATTCTGAGAACGCATGTGAAGAACACGCACACGGAAAAGGAACCCATGAAATGCCTGGATTGCGATCTGCAATTTACGTCCGAAGTTCGACTAAAGCATCACATGATGATCGAGCACAATCGTTTGGAGGGTACCCTCGCTTGTCCTCACTGTCCCAAGAGGTTCGTCAACCAATTGAGACTGAAGACGCATATGATATCACACTCGGACGAGCGGCCGTTCACCTGTGACATATGTGGCTTTATGTTGAAGACTAAAATCCAACTGATCAAGCACAAGCAGAACAGACACAGCAATGAGCGACCACTGCAGTGCAGGTACTGCGCATGGAGGTGTAAACAAGTTAGTGCACTGGTTTGTCATGAAAGAACCCACACGAACGAGAGACCCTACAGCTGCAGCGTGTGCAAGCAGAAGTTCAAGTACCTGGGTGATAAGAACAAGCATGAGAGACGGCACGAAAGCCTTGGCGGTTCTGGGTTTAAGAGAATCGTTACTGGAAGAAATACGAATAAGAgtgtcaaaaaaaaagattcaaattCACAAGAGCAGGATTCCGAAGTGGAGCACGAGGAGTACGATGCTGAACagcaagaggaagaagaatacGAAGAACAGGTTGAAGGACAGGTCGAAACTTTTGATGAAacacaaattattaaatttaatgataatggagaaataataaacgaggAATCTGAAACATCTTATGACCAGatgtACGTAGAGGATACATCACAAGATGCGAGTGACTCGAGTAAAATCGTGATAGGTATGGAAGAAGGAACAGTTTATGAGGAAGAAGTTACAGCGGATCAGATTGAATCGGAAATGATTACTGGTAATATAATAAACGAGCACATGTTACAATCAGGAACTATACACACGATACAACCAGGAACTGTGGTCCATCTTCAGCAGCAAGACGAAACGGGAAAGATCCAAGTAATACCAGTTATGCTGTCATTGCCAGACTTGTCAGATGCCACTGCTGAAGTTAATTTAGCAACCGCCTCTATAATGTATAACAACTAA
Protein Sequence: MSNNSFLSMDFEECDSSIIDGTNAAAGQSPALYEKNKHNNERSEEDSDTQEGDMEIVSDVREVIKMKKINLSDNEDHNYTDTQTEKSDNSNTGFTSNFIYSKVENSGKEKYIGLKISNLNDLKKAIPRLKLPTILSSTSLSPSSFVKKPTAVPIEVKQKLHKYCRACAGLKVPLINIFSVKGKQMRLAQQIQHLEGINEHDSLSTQMCMDCICDLRMSYKFFMQIKKAEIKLKSICDSFNNFPKTSEDDEMTDVFIKKETPMESNNYEVLDNEGIKSEAEDIDCTEMNEISSIGNDSFEEFDPDNPNYTDEVDSKKITESYIELDKSTGSNINTHKSLKSDTYSNNVMESETDLDKESETIIQDDIDKHNESVYQYDESLDAYIKVEHSEGVQEDVKPENKLVESNTTNASQTSESFIPLTKSSNTSKRKLSSGNISDDSNDKPNKIDFQKLKDLKIPKLDLQDSTKIKTQEDGVMYVTAKGSKPNEVLLIKVKKMNKPSEKKVEKTLGKKKGDAILHQKGYSRYEYANKKDNSIDEQIEQYKKKRVQILGEVANMTETDFDENLETRVIGGEVSTEIEMEEQEDEMENTEEYVDHIEFSETPSFPSQHEAPLTKIQQRWKDIKKRHETIHKDLAEDCTDRLKALLRQKDEDIQEFISYLKQRRIVVSRLKDEHIISLYEAKNHVLLEKLPLQFFATPEVDIDPFEFKEIFDCDFCDESFPSRDMEYEHSKIHDFKLMHYCEDCQQEFLTHKGKRSHNITCVQKLMCKYCDMILESKGKKRQHEQKHCDEQNGQLCDLCGEKFKHQGTLDQHVKSRHMQLEKIYKCPQCSKRFAFRTKLTFHLKSVHTTSRPYLCEDCGSDFKNPASLRHHRIRKHQPTNNKKECTVCHKMIPVYSMSKHMHTHKAYTIQCPHCDKMFKNTSTLKQHIRIHEDQRQYKCDMCGVGFNRRDGLRLHMKVHLKADSRGLKECSCQLCGEKFPNHSMLVIHRNRTHKDGRNYTCHICNRSMISTRSLEWHLAHIHNETMPGIVRDESSVDAETKRVSCYHCDKTFKTEMILRTHVKNTHTEKEPMKCLDCDLQFTSEVRLKHHMMIEHNRLEGTLACPHCPKRFVNQLRLKTHMISHSDERPFTCDICGFMLKTKIQLIKHKQNRHSNERPLQCRYCAWRCKQVSALVCHERTHTNERPYSCSVCKQKFKYLGDKNKHERRHESLGGSGFKRIVTGRNTNKSVKKKDSNSQEQDSEVEHEEYDAEQQEEEEYEEQVEGQVETFDETQIIKFNDNGEIINEESETSYDQMYVEDTSQDASDSSKIVIGMEEGTVYEEEVTADQIESEMITGNIINEHMLQSGTIHTIQPGTVVHLQQQDETGKIQVIPVMLSLPDLSDATAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286693;
90% Identity: iTF_01037282;
80% Identity: -