Ngir009885.1
Basic Information
- Insect
- Nasonia giraulti
- Gene Symbol
- -
- Assembly
- GCA_000004775.1
- Location
- GL277768.1:6026247-6028272[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-08 7.4e-05 22.1 0.0 2 40 15 52 14 56 0.90
Sequence Information
- Coding Sequence
- ATGGGTCGCTACATACGGCAAACGACGAAAGGAAACTGGAATCCCGATCAACTAAAAAATGCCGTTGAAGCGgtgaaaaatggaaagaaaattcgcgcgtgcgcgaaaaaatacaaaatcccTGAAAGTACGCTGAGAAGGAggatgaaagaaaataatctcgACTCACCTATTATGGGTGTAAGTACAACCTTCACTCCGGAGCAAGAAAGGATTATTGTCGAGTACTTGAAAAACGTCTCCGGTTGGTTTCGCGGGCTGAACTCCATTCAGTGCAGAAAAATAGCCTTCGACACGGCGGAAAAGCTGAAGATAAAGCACAAgtttaacaaaaaacaaaagattgCGGGAAAAGATTGGTTTTGCGGCTTTTTAAAGCGAAATCCAGATTTCAGTATTCGCAAACCGGACGTGCAAAGCAATGAACAGTTTCAACAGTTTTATAAAAAGGAGTTGGATAAGTTTTACCATGATCTGAATCTCATCATCGagaaatatgaattttcatcagaCAGAATTTATAATGTTCAAGAGACAGAGATTTACACAGTCAAGgTAAAAGAAAACACTGGTGATAAAAGTTTAAACTCTGAAGTATCATGGGAGAGAGCAAACAGAACATCAGTAGCATGCGCCACAAATGCTGTTGGATCATTTGTACCTCCaatgtttgtttttccatTTGAAGACAAAATGCAGCTTATGAAAATAAGTGTATCCAAGGATGCAGTGGTTGAATGCAATTCCAATGGAAACGTAAATGAAGAGATGCATCTAATCTGGTTGAAGCATTTTGCTGAGATGGTCAATCCCACAAGAAGTGATCCAATTCTTCTCATACTCAACCCTCACAATGGTCATGCAAGTATAGATGCTTATGAATTCTGCAAAGCCAATCATATACATGTATTGACTTTACCGCCACATGCAGCTTTTCAAATGCAACCACTAAATGCAACAATATTCGTGCCTCTCAAGAGAGCTTATTATAGAGAGTGCGAAGCTTATATGAGAAACACTGGAACAAAAGAGATTTCAGTATATAAAATAGCAGATCTATTTACAAAAGCTTTGGACAAAACAGCCAGCATAGATAAGGCTATAAAAGGATTTAAATCAACCGGTATATGGCCTGTTAACCCATTGGTATTGGATGTAAAGAAGCTTAATCGCTGTACCAAAATTAATATCCATAGTAATGCTGCTAGTGATGGTGATGATTCTGCTGGTCAAAGAAGCTCTAACAGCAACTCCTCCGACATAAGTAGGACAAGCAGTAGTTCATCTGAAGATATTGATACTAGTGAAAGCAGTGACTCATCTGAGAACAGTGATCAAGATAGTGACTTGTGTGAAAATCGCTACCAAACTAGAACACGatgccaaaaaaaaagaaaatataattgttga
- Protein Sequence
- MGRYIRQTTKGNWNPDQLKNAVEAVKNGKKIRACAKKYKIPESTLRRRMKENNLDSPIMGVSTTFTPEQERIIVEYLKNVSGWFRGLNSIQCRKIAFDTAEKLKIKHKFNKKQKIAGKDWFCGFLKRNPDFSIRKPDVQSNEQFQQFYKKELDKFYHDLNLIIEKYEFSSDRIYNVQETEIYTVKVKENTGDKSLNSEVSWERANRTSVACATNAVGSFVPPMFVFPFEDKMQLMKISVSKDAVVECNSNGNVNEEMHLIWLKHFAEMVNPTRSDPILLILNPHNGHASIDAYEFCKANHIHVLTLPPHAAFQMQPLNATIFVPLKRAYYRECEAYMRNTGTKEISVYKIADLFTKALDKTASIDKAIKGFKSTGIWPVNPLVLDVKKLNRCTKINIHSNAASDGDDSAGQRSSNSNSSDISRTSSSSSEDIDTSESSDSSENSDQDSDLCENRYQTRTRCQKKRKYNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01036130;
- 90% Identity
- iTF_01036945;
- 80% Identity
- -