Ngir001001.1
Basic Information
- Insect
- Nasonia giraulti
- Gene Symbol
- bab2
- Assembly
- GCA_000004775.1
- Location
- GL274178.1:4440611-4495573[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.7e-13 9.7e-10 37.7 0.0 1 40 416 456 416 459 0.90 2 4 8e-12 9e-09 34.6 0.0 2 39 471 508 470 511 0.94 3 4 2.5e-19 2.8e-16 58.6 0.0 2 45 526 570 525 570 0.97 4 4 3.6e-18 4e-15 54.9 0.0 1 42 577 619 577 620 0.97
Sequence Information
- Coding Sequence
- ATGGTGAGCGGAGGGATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAACATGACGTCGGTGTTCCATCAGCTCCTGCAGACCGAGGCCTTCGTCGACGTCACGCTGGCCTGCAACGAAGCCTCGCTCAAGGCGCACAAGGTGGTGCTGTCCGCGTGCAGCTCGTATTTTCAGAAGCTCCTGCTGTCGAACCCCTGCAAGCATCCGACTATCATCATGCCCCAGGACGTCTGCTTCAACGACCTCAAATTCATTATCGAGTTCGTCTACAGGGGTGAAATCGACGTCTCTCAGGCAGAGCTTCAGTCTCTGCTGAAGACGGCCGACCAGCTGAAGATCAAGGGTCTCTGCGAGGTGCCGGAGAGCAGGGAAGGCCCCTCGGTGAGCTTGAGCTCGCCTCCACGTGACTCCAGTACGCCCCGGCTGAACTTCGCCAAGCTCAAGAGGCACCACCCGCGCTACAAGAGGCCGCGAACCAACTACGAGTCGGGCTCCAACGCTGTCCAGTCCAGAGCCAACACGGAGTCCTCGAAACACCACCATCACCTGCATCGCCACCACGACAGCACCAAGTACAAGGACGAGGACTTTGTCGACAGCTACGTGCGCGACTCCAATAAAGAGAATCGGCGAGACTGGCCAGCTGAAGATGACGATTGCATGGAGACGACAGCGACGAGCACAACAGCAGTAGTCCTGGACTCGTGCCAGCGAAGCAGTGGCAGCGCAGGAGGAGCTGGGGGAgataacaacaacagcagcgccagcgCTAACAacaacgccgccgccggaaCCGCAGCCACCAACAACAACGGTGACATGTTCTGTCACACAGGTCTCGGTCACTACGGCCACCATCCAGACCCGGGCGAAGTAGACCTGCCACCGGAGACACAGCCGACCCCACCAAGCGCGACGCTCGTTGGCACCACCATCACTCACCTCAGGGATCCGGATCATCATACCGCAGACATCCAGAGCTGCGACAGTGTGAAGATAAAGTTCGAGACGCTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACAGGGCGAGCGTCAGTTCGAAAAACGCCGACGACAACATGATGATGATCACGCCAGAGCTGCTGGGACTCATGCCCTCGGGCAGTTCGGTGCACTCGGACTCCGGCGAGAACAACTCGCGCAGTCACTCGGGACAATCGGGCTCGCATCACCACGGCTCAAAGTCCTGGACGCAGGAGGACATGGACGCGGCTCTCGAGGCGCTCAGGAACCACGACATGAGCCTCACGAAAGCTTCCGCGACGTTCGGTATACCTTCCACAACGCTATGGCAGCGTGCCCACCGACTCGGCATCGAAACGCCGAAGAAGGACGGGCCCACCAAGTCCTGGAGCGACGAGAGTCTGAACAACGCTCTGGACGCGCTACGCACCGGCACGATCTCCGCCAACAAAGCTTCCAAAGCTTTCGGAATACCCTCGAGCACGCTCTACAAGATCGCGAGGCGAGAGGGCATCAGACTGGCTGCACCGTTCAACGCGAGCCCTACGACCTGGTCGCCAGCCGATCTCGATCGAGCCCTCGAGGCTATTCGCTCCGGACAGACGAGCGTACAGAGAGCTGCCACGGAGTACGGCATTCCTAGTGGTACGCTCTACGGCAGATGCAAGAGGGAGGGCATCGAGCTCAGCAGGAGCAACCCCACGCCCTGGAGCGAGGACGCAATGACCGAGGCTCTCGAGTCCGTCAGGCTGGGACACATGAGCATAAATCAAGCGGCGATCCACTACAATCTTCCCTACTCGTCGCTGTACGGCCGCTTCAAGCGAGGAAAGTACGAGGAGCCGGTGGTGAACGAGATGTCGCAGGATGGCTCCTCCCAGCACTTCGTCCATCAGAGCCCGACCCAGAACCACTCGTCCTCGCTTCCCGACCAAATGCCGTACCAGGGCAGCTGA
- Protein Sequence
- MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRLNFAKLKRHHPRYKRPRTNYESGSNAVQSRANTESSKHHHHLHRHHDSTKYKDEDFVDSYVRDSNKENRRDWPAEDDDCMETTATSTTAVVLDSCQRSSGSAGGAGGDNNNSSASANNNAAAGTAATNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIETPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRAATEYGIPSGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFVHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_00463914;
- 80% Identity
- iTF_01035551;