Basic Information

Insect: Napeogenes sylphis
Gene Symbol: -
Assembly: GCA_959347405.1
Location: OY365779.1:29754014-29759470[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8 1.2e+03 1.6 0.0 3 23 107 127 105 127 0.93

2 18 0.0024 0.36 12.7 0.1 2 23 131 153 130 153 0.95

3 18 0.0023 0.34 12.8 0.2 2 23 378 400 377 400 0.96

4 18 3.4 5e+02 2.8 0.5 1 20 408 427 408 429 0.94

5 18 0.023 3.4 9.7 0.4 2 23 439 460 438 460 0.94

6 18 0.93 1.4e+02 4.6 0.4 1 23 476 499 476 499 0.85

7 18 0.072 11 8.1 1.3 1 23 508 531 508 531 0.92

8 18 8.7 1.3e+03 1.5 0.2 9 23 582 597 573 597 0.89

9 18 0.034 5.1 9.1 1.6 2 23 608 630 607 630 0.92

10 18 3.2e-05 0.0048 18.6 1.9 1 23 664 686 664 686 0.97

11 18 6.2e-06 0.00092 20.9 1.3 1 23 693 715 693 715 0.98

12 18 8.3e-05 0.012 17.3 2.3 1 23 720 742 720 742 0.96

13 18 0.0023 0.34 12.8 1.7 1 23 748 770 748 770 0.99

14 18 1.7e-06 0.00025 22.7 1.4 1 23 776 798 776 798 0.98

15 18 9.5e-05 0.014 17.2 2.2 2 23 805 826 805 826 0.97

16 18 0.00054 0.081 14.8 0.3 2 23 834 856 833 856 0.97

17 18 0.0018 0.26 13.2 1.0 1 23 861 883 861 883 0.98

18 18 0.0032 0.47 12.4 3.3 1 23 889 912 889 912 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8	1.2e+03	1.6	0.0	3	23	107	127	105	127	0.93
2	18	0.0024	0.36	12.7	0.1	2	23	131	153	130	153	0.95
3	18	0.0023	0.34	12.8	0.2	2	23	378	400	377	400	0.96
4	18	3.4	5e+02	2.8	0.5	1	20	408	427	408	429	0.94
5	18	0.023	3.4	9.7	0.4	2	23	439	460	438	460	0.94
6	18	0.93	1.4e+02	4.6	0.4	1	23	476	499	476	499	0.85
7	18	0.072	11	8.1	1.3	1	23	508	531	508	531	0.92
8	18	8.7	1.3e+03	1.5	0.2	9	23	582	597	573	597	0.89
9	18	0.034	5.1	9.1	1.6	2	23	608	630	607	630	0.92
10	18	3.2e-05	0.0048	18.6	1.9	1	23	664	686	664	686	0.97
11	18	6.2e-06	0.00092	20.9	1.3	1	23	693	715	693	715	0.98
12	18	8.3e-05	0.012	17.3	2.3	1	23	720	742	720	742	0.96
13	18	0.0023	0.34	12.8	1.7	1	23	748	770	748	770	0.99
14	18	1.7e-06	0.00025	22.7	1.4	1	23	776	798	776	798	0.98
15	18	9.5e-05	0.014	17.2	2.2	2	23	805	826	805	826	0.97
16	18	0.00054	0.081	14.8	0.3	2	23	834	856	833	856	0.97
17	18	0.0018	0.26	13.2	1.0	1	23	861	883	861	883	0.98
18	18	0.0032	0.47	12.4	3.3	1	23	889	912	889	912	0.98

Sequence Information

Coding Sequence: ATGTCGTCGGATGAATCAGACGACGAGCCGCTAGCCCTTTTAGCGGCATCAAAGAGAATAAAGTTCGAAGATGAATTCACAAATAAGGATGATCAGGAAGATAAGGAACCGTCTCCTAAAAAAATGAGGACTGCAAATAAAATTGATCGTAAGCTGAACGTCGCTGCACCACCGGTTATTGAAAGACCCGCTGATGTTTGGTTGTATTTAAAAGACTTAAAACCTTCAGGCCCTTATAGCTGCTTATTGTGTGACGACTGGTTTATTAATCGCTCCAAAATGATATTACATTATGCAGTAAACCACAAAAAAGACTTTTGTGGTATATGcagatattttgtaCCAGACAGAGAAGCATGGCTGGCCCATGAAAATTTTCATTTACCGTGGCCGTGTTCTCAATGTGTTGAAACTTTTTCATCCGAACCAATGTTGAGACAACATCTCAATTCAGTCCATAACCTAGTCCACTGTAGATTATGCCACTTCAGAGTTTCAGCTGATTACAATTATAACTCTCATTTATTTGAGAAGCACAGTGTTACTAATGTTGCATGTAAAAATGAGGATTTACTTTGGAAAGTAGAAGATAGTGATAAATTCCAGTGTTTACTTTGCTTAAAGTCTGAAAACATAATATCTACATTCTTTAGTCACTATATGGGCATACatcatttaactttaaaatgtttgaCAACTATTATTGCTGGTAAAGACACACCCTTCACTGTAAAAGGAGCAGAAGTGAGTGACAAATTTGTTAATGAGCAGCTTAAAGGTCATTTAAGGTTGGGTTATGTGGATTGGGAACAAAAAAGTGATACAAAAGAagacattgaaaataaaaatgacaacaAAATTATTTCGGTATCAGAAATTAAAGATGAAATTATCAGTGATGTGGAAGAACAGCcggaaaaagaaattaaaacaaaaaaaaagagggATGGTAAAAATAATGAGTATAATGGTGAAGATGATTTTGATATTACATACATGGAAATGATAATTGTTGCGGAATCCTATTTTGAGTACATTGATAAATctttaaatgatattaattcaaataatatgcCTGAAAAATCATacttaaattatgaaaaaatgaaAGCAGAAATATGTATGGATGTGGAGTGTACTTTTTGTAAAATAGCCTTTGATACGGCTCAGTCATTTATAGAacatatgaataaaatacaCAATGTTAAATCTGTGCCTCTTTATTCATGTAGAGTTTGTTGTGCTACATTTGacaattatattgatttaacaAGTCATGTAAGTGAGGAGTTAGCAGACTTTGAAGACTTGTGGATTTGTCAGTTTTGTGACAAGGAGTTTGATAGCCGAGAGGCTACAAGACAACACTTGACAGAACATTGGGGGGCATTGGATTATGATAACTGTTTTAGCCCACACTTAGGTTTCAAATGCAAATATTGTCCAACATTATTTTGGAATGAACCAGATAGAGAGACACATCAAATAAAAGtacattttgataaatataaacatcaGTTTTATAAATGTGATAAGTGTGAAATGAAATTTGGtgataagGTGTGGTATGTTTATCATCACTTGGCAAATCACCAACCCCAAGATACCAAAACAAACTACATTTTAAAGTGTTGCCTTTGTTGCTCCGTGATGCCTAATATTGAGGACATGAGAACTCACTTTGCTGCTAAGCATGCTGAATTTAAGAAAGTATATTGTAATTTAGAACCTTGTATGTACAAACCTTTAAATCATAGGAAGTCTTTAAAAATTCATACTAAGATGGTTCACACTCCAGCCCAAATCCCAACAAAACAGGTCTCCTGTAACATCTGCGACCGCAAGTTCAATAATGCCCGTGCCTGCAGCACTCACATGTCACAAGTACATGGACCCGGCAAGTTTAAATGTAAACTGTGTAGAGATGTGTTACACACTCCTGATGAGAGgAAATTGCACTATCTCCTGTGCCATCCTGGGCGACACCCATTTGAGTGTACAGAGTGCGGCAAGTCATTCCAGTACAAGTCATCACTGTATATGCACAAACAGGAACACATGCCCAATAAGCAGAGTTATACATGTACATACTGCAGTAAAGTTTTTGcgAAAAAGGATTCGTACCGCGAGCACATCCAGATCCACGAGGGTCCTCGTCACGCGTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGTCACGAGCGGCGCCACACGGGCGAGCGGCCCTACCGCTGCCCGCACTGCGCACGCGCCTTCGCCGACAAGGGGGCGTGTACCTCGCACGCACGaaCTCATTCTAAGGAATCATCTTATGCTTGTCTGTACTGTGGGCAAACATTTGTCCAGAAGTCGAAGCTTACTTATCATATACGGAAACATACAGgagaaaATTTGGAGTCATGTCCCGTGTGTTCAAAACTGTTTACTAGCGCGTGTTCATTGCGAGAGCATATGAAAACGCATGTGGAAAAAAAACAGATTGTCAAATGTCCTCTGTGTGATAAGGGCTATCAGGACGAACGCTACATGCTGCGGCACCTGCGCACGCTGCACTCGCGGGCGCAGTTCTCGTGCCCGCTGTGCCACAAGCTGCTGTCCAGCGCTGCAGGACTACGGCACCACGTCATCACACACAGCTGCGTTAACATCTTCCAGTGTAAATCGTGCACGAAGTCCTACGCTGTTAAAAGAACAATGTTAAAACATCTACGAAAAAGACATGGCTTGACTGGCAATGAACTGAACATAAAGGACTACTTCACGCGGCTCGAGCCACGAGAGTGTCAGCTGAATCTCGACGAAACTACAATGACCAGTATATTTGGACCCCCTAAGAAAAAAATGAATGATGTTTTAATTGGGGACTTTGTAACATTAGCTAAGAATGTTAATATGCCAGAGGTACGGAAAGGAACGGAAGATACGGATGACACAGAGGCGAGAGATACAGATAGCAATGATGAGGAGCCAATAGTGAAAATCAAGCAAGAAGTTCATACACAGAGTAGTGAGGATGAAATAGAGCCGACGGATTTTGTAAGTGTTAAGATTGAAAGTATAGATGAAGATTATACAGAGTGA
Protein Sequence: MSSDESDDEPLALLAASKRIKFEDEFTNKDDQEDKEPSPKKMRTANKIDRKLNVAAPPVIERPADVWLYLKDLKPSGPYSCLLCDDWFINRSKMILHYAVNHKKDFCGICRYFVPDREAWLAHENFHLPWPCSQCVETFSSEPMLRQHLNSVHNLVHCRLCHFRVSADYNYNSHLFEKHSVTNVACKNEDLLWKVEDSDKFQCLLCLKSENIISTFFSHYMGIHHLTLKCLTTIIAGKDTPFTVKGAEVSDKFVNEQLKGHLRLGYVDWEQKSDTKEDIENKNDNKIISVSEIKDEIISDVEEQPEKEIKTKKKRDGKNNEYNGEDDFDITYMEMIIVAESYFEYIDKSLNDINSNNMPEKSYLNYEKMKAEICMDVECTFCKIAFDTAQSFIEHMNKIHNVKSVPLYSCRVCCATFDNYIDLTSHVSEELADFEDLWICQFCDKEFDSREATRQHLTEHWGALDYDNCFSPHLGFKCKYCPTLFWNEPDRETHQIKVHFDKYKHQFYKCDKCEMKFGDKVWYVYHHLANHQPQDTKTNYILKCCLCCSVMPNIEDMRTHFAAKHAEFKKVYCNLEPCMYKPLNHRKSLKIHTKMVHTPAQIPTKQVSCNICDRKFNNARACSTHMSQVHGPGKFKCKLCRDVLHTPDERKLHYLLCHPGRHPFECTECGKSFQYKSSLYMHKQEHMPNKQSYTCTYCSKVFAKKDSYREHIQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCPHCARAFADKGACTSHARTHSKESSYACLYCGQTFVQKSKLTYHIRKHTGENLESCPVCSKLFTSACSLREHMKTHVEKKQIVKCPLCDKGYQDERYMLRHLRTLHSRAQFSCPLCHKLLSSAAGLRHHVITHSCVNIFQCKSCTKSYAVKRTMLKHLRKRHGLTGNELNIKDYFTRLEPRECQLNLDETTMTSIFGPPKKKMNDVLIGDFVTLAKNVNMPEVRKGTEDTDDTEARDTDSNDEEPIVKIKQEVHTQSSEDEIEPTDFVSVKIESIDEDYTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01033972;
90% Identity: iTF_01033972; iTF_00842923; iTF_00461821; iTF_00959626; iTF_00958906; iTF_00960379;
80% Identity: -