Basic Information

Insect: Napeogenes sylphis
Gene Symbol: -
Assembly: GCA_959347405.1
Location: OY365785.1:15571432-15575975[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.4e-06 0.00051 21.7 0.6 1 23 204 226 204 226 0.97

2 10 0.0017 0.25 13.2 0.8 2 23 232 253 231 253 0.97

3 10 3.3e-08 5e-06 28.0 2.2 1 23 259 281 259 281 0.99

4 10 0.041 6.1 8.9 1.3 1 22 287 308 287 308 0.95

5 10 2.6e-06 0.00039 22.1 1.0 2 23 320 341 319 341 0.97

6 10 1.5e-05 0.0022 19.7 4.1 1 23 347 369 347 369 0.97

7 10 0.00044 0.065 15.1 2.8 1 23 375 397 375 397 0.98

8 10 1.8e-06 0.00027 22.5 4.4 1 23 403 425 403 425 0.98

9 10 1.3e-05 0.0019 19.9 0.6 2 23 432 453 431 453 0.97

10 10 0.00013 0.019 16.7 3.5 1 23 459 482 459 482 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.4e-06	0.00051	21.7	0.6	1	23	204	226	204	226	0.97
2	10	0.0017	0.25	13.2	0.8	2	23	232	253	231	253	0.97
3	10	3.3e-08	5e-06	28.0	2.2	1	23	259	281	259	281	0.99
4	10	0.041	6.1	8.9	1.3	1	22	287	308	287	308	0.95
5	10	2.6e-06	0.00039	22.1	1.0	2	23	320	341	319	341	0.97
6	10	1.5e-05	0.0022	19.7	4.1	1	23	347	369	347	369	0.97
7	10	0.00044	0.065	15.1	2.8	1	23	375	397	375	397	0.98
8	10	1.8e-06	0.00027	22.5	4.4	1	23	403	425	403	425	0.98
9	10	1.3e-05	0.0019	19.9	0.6	2	23	432	453	431	453	0.97
10	10	0.00013	0.019	16.7	3.5	1	23	459	482	459	482	0.96

Sequence Information

Coding Sequence: ATGACATCTGAATGTATTCAAATTACAAGGGACTCTGTAATCGGGGAGCCATCGTCTTCAGATGAAATCGTAAATAATGGgcataataatcaaaatttgaACAGTATGAAAAGTCtagataaaaatgtaaataatgtagaGTTTGTAAGTATTAAACAGGAACCTGATACATCTGATGAGCAttGCAAACCTGACCCAGACTCACTACTAGAAATATCAAAGTGGCATAATGTATCTATAAAAGAGGAGCCGGCATACCACAGTATAGATGTTGAAGTTTCTATAAAGGAGGAGCCAACCGATGAGGACACCAACGAGACCCGGTCGCCGGACCCCCACAGGACTACCCTGTCCTGTAGATACGCCCTTAACAGACGATGGAGAAAGGGAGGCTCTCTGTGGATTCGAAGCGCCTCACCACAAGGTCTCCAACGGAAAGGTGGTAAAGTCATTGGCGACATCCAACGACCAAAGAGGAAGATACTCCCCGACGCCTGTTTGACGACCGCCGCCTTGACGGAGTCAAGACAAATCTCAAACTCGGCGGCGGTGGGGGAAGAAGTACTGTCTGAGGAAGTGCTGAGTCTGAACTCGACGGTGGACGGCAAATACATGTGTCCGATCTGTTACAAGCGGTTCACGAGCAAAGGAAATGTACAGAGACACGTGCTACTACACACGCGGGAGAAGTTGGAATGCAATGTGTGCTTCAGACAGTTTGTCAAGAAATACGTATACGAGAGACATCTCCTGACACACTCCACCGAGAAGAGATTCAAATGCGAGGAATGTCAGAAGAGCTTCAGAACATCGTCTAATTTAGAACAGCATAAACGAATACACCTCATCGTCAAACCTTTTGAATGTCAAACGTGTTGTCGTCAGTTTGCCGTCAAGGCGAATCTAGTGAAGCATCAGAGTACGGGTCGGTGCAAGCGATCCAACGACCAGCCCATAGTTTGTAACGTGTGTGATAAAGTGTTCAAAAAGGAGTTTTTACTGAAGAGTCACCAGCGACGTCACACAACCGAGCGGCCCTTCACGTGCGACAAGTGTCACATGAGCTTCAAGTACAAGTCGACTTTGATCCGCCACGTACAACTCCACAACGGCATCAAGCCCTACTCCTGCAAGATATGTAGGAAGAAGTTCACTCACGCCGGTCTCATCAAGCCTCACATGAGGAAGCACACCGGAGAGAAGCCGTACTCCTGCCCCGTTTGTGATAAAACTTTCGCTCACAAACACAACATGCAGAGACATACAATACGACACACCAAGATCAAGAATTTAGTTTGTACGGTCTGCAGCAAGACGTTCCCGAAGGAGAGCAGACTGATCTATCACATGCGGACACATACTAACGCTAAACCGTTTGTCTGCGGTGTCTGTGATAAAAAGTTCTCCCACCGACAGAATATAATGAGACACTATAGTCGCAAGCATCCCGACGATACCTACGACTGTCGCGACACAGACGCTAGTGTCGCGAAGGATGTGTGGGAGAATGTCGTTAAAGGAAACATTAAGACGGAAAATGCAAATGGCGGAGATGATTCTGATATAAGAATAACACCGGATTGA
Protein Sequence: MTSECIQITRDSVIGEPSSSDEIVNNGHNNQNLNSMKSLDKNVNNVEFVSIKQEPDTSDEHCKPDPDSLLEISKWHNVSIKEEPAYHSIDVEVSIKEEPTDEDTNETRSPDPHRTTLSCRYALNRRWRKGGSLWIRSASPQGLQRKGGKVIGDIQRPKRKILPDACLTTAALTESRQISNSAAVGEEVLSEEVLSLNSTVDGKYMCPICYKRFTSKGNVQRHVLLHTREKLECNVCFRQFVKKYVYERHLLTHSTEKRFKCEECQKSFRTSSNLEQHKRIHLIVKPFECQTCCRQFAVKANLVKHQSTGRCKRSNDQPIVCNVCDKVFKKEFLLKSHQRRHTTERPFTCDKCHMSFKYKSTLIRHVQLHNGIKPYSCKICRKKFTHAGLIKPHMRKHTGEKPYSCPVCDKTFAHKHNMQRHTIRHTKIKNLVCTVCSKTFPKESRLIYHMRTHTNAKPFVCGVCDKKFSHRQNIMRHYSRKHPDDTYDCRDTDASVAKDVWENVVKGNIKTENANGGDDSDIRITPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00960590;
90% Identity: -
80% Identity: -