Basic Information

Insect: Napeogenes sylphis
Gene Symbol: -
Assembly: GCA_959347405.1
Location: OY365779.1:2335130-2338224[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.025 3.7 9.5 5.1 1 23 127 149 127 149 0.97

2 15 0.00028 0.041 15.7 7.9 1 23 154 176 154 176 0.97

3 15 8.5e-05 0.013 17.3 0.5 1 23 209 231 209 231 0.98

4 15 9.8e-05 0.015 17.1 1.8 1 23 240 262 240 262 0.97

5 15 0.064 9.5 8.3 1.2 2 23 271 293 270 293 0.95

6 15 5.9e-05 0.0087 17.8 1.1 1 23 309 331 309 331 0.98

7 15 3.9e-07 5.8e-05 24.7 1.9 1 23 342 364 342 364 0.98

8 15 4.6e-07 6.9e-05 24.4 1.8 1 23 370 392 370 392 0.99

9 15 1.4e-06 0.00021 22.9 3.7 1 23 398 420 398 420 0.99

10 15 7.9e-08 1.2e-05 26.8 1.6 1 23 426 448 426 448 0.96

11 15 1.2e-05 0.0018 20.0 0.4 1 23 454 476 454 476 0.97

12 15 9.3e-06 0.0014 20.3 0.2 1 23 482 504 482 504 0.98

13 15 0.0057 0.85 11.6 6.4 1 23 510 532 510 532 0.97

14 15 1e-06 0.00016 23.3 1.1 1 23 538 560 538 560 0.98

15 15 0.023 3.4 9.7 0.6 1 20 566 585 566 588 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.025	3.7	9.5	5.1	1	23	127	149	127	149	0.97
2	15	0.00028	0.041	15.7	7.9	1	23	154	176	154	176	0.97
3	15	8.5e-05	0.013	17.3	0.5	1	23	209	231	209	231	0.98
4	15	9.8e-05	0.015	17.1	1.8	1	23	240	262	240	262	0.97
5	15	0.064	9.5	8.3	1.2	2	23	271	293	270	293	0.95
6	15	5.9e-05	0.0087	17.8	1.1	1	23	309	331	309	331	0.98
7	15	3.9e-07	5.8e-05	24.7	1.9	1	23	342	364	342	364	0.98
8	15	4.6e-07	6.9e-05	24.4	1.8	1	23	370	392	370	392	0.99
9	15	1.4e-06	0.00021	22.9	3.7	1	23	398	420	398	420	0.99
10	15	7.9e-08	1.2e-05	26.8	1.6	1	23	426	448	426	448	0.96
11	15	1.2e-05	0.0018	20.0	0.4	1	23	454	476	454	476	0.97
12	15	9.3e-06	0.0014	20.3	0.2	1	23	482	504	482	504	0.98
13	15	0.0057	0.85	11.6	6.4	1	23	510	532	510	532	0.97
14	15	1e-06	0.00016	23.3	1.1	1	23	538	560	538	560	0.98
15	15	0.023	3.4	9.7	0.6	1	20	566	585	566	588	0.93

Sequence Information

Coding Sequence: ATGTTAATCTTAGAAAAAACTTGTCGGACCTGTATGAAAAGTAATGTTCCTTTAGTTGATTTATTCGGGCCTTTGAAAATTGAAGATAATTGTTCATTAAACCTTGCAGATGTACTGATATTAACCACTACTTTAAAGGTAACCAGTGACGATGGACTACCCCAAAATCTTTGTAATGAGTGTGCTagatttttacaaaatgtatatacatttcgTAGAAAAGCACATAATTCGGAAAGTGATCTGAAGAAAGTAATATTTGTATCGGAAATCAAAGAGGAAGTAGATAGTAATTTAAAGAATGAATTAGATTACACAAACACATATGACTATTGTCTAGAAGATGCTAGTAGTGAACCAGATTCTAGCTTACCAACTTACATTTGTGATGTGtgcaaaaaacaattttataaacataaaaagtttttaaatcatTTGTCATCTCATGAAAGTCTTAGGTTTAAATGTCATATTTGCAATAAAGGGTTTCATAAACAGTCTTCATTAAATAGACATTTTACTAAACACAACGAGGCATCACATGGTAGAAATGAAAAAgaattatttgataataatgttGATGAAATTCATATTGATGTTAAAAAAGAAGATTTTAAAGAGCAATACAAATGTAACGAATGCACTCTTATATTTGAAACCCGAGCAACTTTATTTGAGCATATCAAAGAACATAGCAACACATTAAGTATTAAATCTTTTGTATGTAATATCTGTAGTAAACACTTTTCCTTAGAGTCTACCCTAAAACTACACCTACAGGAACACGCTGAACTGCCAATTGATTCTACAAAAtgcttaaaatgtttaattatcttTCCAAGTTATAAACAACTCATAGAACATATTAACAACTGTCACATAGAAGATGTTAAGGAGGTGAAATTAGAGAATGGTGATGAGCAATACGAGTGTCTTGAGTGTAATATAGTGTTTACAAAGCAGAGGTCTTTTTTTGCACATTTAAAAAGCCACGAACAAGGAAAACTAAAAAgagataacctatataaatgTGATAATTGTGATAAAgtgttttcattaaaaactttattgagACGGCATATGAAGTTGCATTTAGAAGACCGTCCATTTAAATGTAGTAAGTGTACAAAGAGTTACTCTCGTCAGGACCAACTTGCAGCGCATGTTCGTAAGCATGATGGAACCAAGCCTTATGTCTGTCCGCACTGTAACAAAGCTTTCTCCCAATTGTGCAGTTTGAAAGATCATGTTCGTACACACACGGGTGAGACACCATTTTTATGTTCGCAATGTGGGAAGGGTTTTAGTAATAGTTCTAACTTGCGACAACACTTACGACGGCACACCGGCGTGAAACCATTTGCCTGTAATCTCTGCCCTAAGACATTTGGAACTAAAGGACAAATGAAACAACATATAGACACACACACCGGAGTCCATCCCTATAAGTGTGGTGTATGTGGGGCCGCCTTTACCAAACCTAACTCACTGAAGAAGCATAAGCTCATTCATCTCGGTATAAAACCATTTGCCTGTGATACTTGTAATATGAGgtTCACGTGCAAGGACCACCTGACACGTCACAAGCGCATCCACACGGGCGAGCGACCCTACCGCTGCCCGCACTGCACGCGCGCCTTCGCGCAGAGCAACGACCTCAACAAACACGTGCGCGCGCACCTGGGACAGAACATATACCAatGTACGGTATGTCAGGCGAAATTTAGATTAATGAGGGAATTAAAAAGTCACTATCCAGTGCATTACTTGAACGGTCAACCACCGGAACCACAAAACGATATGGTCGCCCTGACATGCAAGGAGGATCAGGATAATATAGAGACACCACCGGACGGACAGATCACTATCACATTTAATAGCAGTGTACTTGATAAGAACAGTTTAGGAGATATCACCATCAATATAACACCAGATAAAATAAGCAAATGA
Protein Sequence: MLILEKTCRTCMKSNVPLVDLFGPLKIEDNCSLNLADVLILTTTLKVTSDDGLPQNLCNECARFLQNVYTFRRKAHNSESDLKKVIFVSEIKEEVDSNLKNELDYTNTYDYCLEDASSEPDSSLPTYICDVCKKQFYKHKKFLNHLSSHESLRFKCHICNKGFHKQSSLNRHFTKHNEASHGRNEKELFDNNVDEIHIDVKKEDFKEQYKCNECTLIFETRATLFEHIKEHSNTLSIKSFVCNICSKHFSLESTLKLHLQEHAELPIDSTKCLKCLIIFPSYKQLIEHINNCHIEDVKEVKLENGDEQYECLECNIVFTKQRSFFAHLKSHEQGKLKRDNLYKCDNCDKVFSLKTLLRRHMKLHLEDRPFKCSKCTKSYSRQDQLAAHVRKHDGTKPYVCPHCNKAFSQLCSLKDHVRTHTGETPFLCSQCGKGFSNSSNLRQHLRRHTGVKPFACNLCPKTFGTKGQMKQHIDTHTGVHPYKCGVCGAAFTKPNSLKKHKLIHLGIKPFACDTCNMRFTCKDHLTRHKRIHTGERPYRCPHCTRAFAQSNDLNKHVRAHLGQNIYQCTVCQAKFRLMRELKSHYPVHYLNGQPPEPQNDMVALTCKEDQDNIETPPDGQITITFNSSVLDKNSLGDITINITPDKISK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00958811;
90% Identity: iTF_01033927;
80% Identity: -