Nsyl002982.1
Basic Information
- Insect
- Napeogenes sylphis
- Gene Symbol
- -
- Assembly
- GCA_959347405.1
- Location
- OY365776.1:38437073-38440969[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.7e-11 2e-08 35.1 0.0 4 39 165 201 162 205 0.89 2 4 1.1e-10 5.8e-08 33.7 0.3 2 39 217 254 216 257 0.92 3 4 7.2e-16 4e-13 50.2 0.2 2 45 272 316 271 316 0.97 4 4 4.1e-18 2.2e-15 57.4 0.0 1 43 323 366 323 368 0.95
Sequence Information
- Coding Sequence
- ATGCCAGGAACGGAAAGATTTAACGTGAAAAGCGAGCCACAATCTGATGAAGAGGACTTTAAATCACAATAcgtaaaagcttattttaagaaTCAGttaTCAGACTACCAGccaataaaattagaaaatattcaAAGCGAGAATGCCTCTACCAACCTTTTACATCAGCTGCAgGGTTCGCTGGAGGAGCTGGCGCCAGCAGGCCCGGCAGCTACGCCCGTCAGCGCACCTCTGCCGGCTCCGAGGGACACCTCACTCGCCACGCTGCAGCCCGCCGCACACCACGAGGGAACATCATTAATCGATAGACACATACAAATGATGACTGCTAACGAGATAGCTGACTCTTCAGAATTTGTGCCCCTCATGGCTATCAAGGACGAGCCCAACTCGGAGGGAGaacagCCACATCTAAGCGGTGATGACACTAGCGACTCCAGTGGGCCGACGACGGAACCCGTCCGGGGTGGCCCCAAGACTTGGACGCAACAGGACATGGATAAAGCGTTGGAGGCGCTCCGGAAACACAACATGAGTCTTACTAAGGCATCTGCAACATACGGCATTCCATCCACAACTCTTTGGCAGCGAGCTCATCGCCTCGGCATTGACACACCCAAGAAGGAGGGGAGTTCTAAGTCCTGGAGCGAAGCGGACTTACGTGGTGCACTGCATGCGCTACGAGCCGGTGCCATATCTGCCAACAAAGCCAGCAAGGCCTACGGTATCCCGAGCAGCACGCTGTACAAGATCGCTCGGCGCGAGGGCATTCGCCTCGCTGCGCCCTTCAACGCTGCGCCGACAGCCTGGCGCCGGGATGACCTCGCACGCGCCCTCGCTGCCATCCGCGCCGGCGCCGCCTCCGTGCAACGTGCTGCCGCTACTTACGGGATACCCACCGGAACTCTGTATGGAAGGTGTAAAAGAGAAGGCATAGAGCTTTCTCGCTCCAACCCGACGCCGTGGTCTGAGGACGCTATGGGAGAAGCTTTAGAAGCTGTTAGAGTGGGTCAGATGTCCATCAATCAAGCGGCCATTCACTACAATCTTCCTTACTCGTCGCTGTACGGGCGCTTCAAACGCTGCAAATATCAGTCCTTACAGACCCAGCCACAACAAGAGCTACCAAAATACGAAAATGAAAACCAGCAACAAGACATTTTCTACCAACACGCGCCcacacacacagatatacacaACCCATATATACACGAAATGAGCGACATAGACACTTACACACACATGTACTACTCACATTGTAATGTTACCAGCTGA
- Protein Sequence
- MPGTERFNVKSEPQSDEEDFKSQYVKAYFKNQLSDYQPIKLENIQSENASTNLLHQLQGSLEELAPAGPAATPVSAPLPAPRDTSLATLQPAAHHEGTSLIDRHIQMMTANEIADSSEFVPLMAIKDEPNSEGEQPHLSGDDTSDSSGPTTEPVRGGPKTWTQQDMDKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSSKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRDDLARALAAIRAGAASVQRAAATYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQSLQTQPQQELPKYENENQQQDIFYQHAPTHTDIHNPYIHEMSDIDTYTHMYYSHCNVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01033644;
- 90% Identity
- iTF_01033644;
- 80% Identity
- -