Basic Information

Insect: Myzus persicae
Gene Symbol: stc
Assembly: GCA_001856785.1
Location: NW:1155970-1173403[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.76 1.1e+04 -3.7 1.6 15 19 147 151 146 151 0.81

2 15 0.03 4.5e+02 0.7 0.5 4 10 179 185 178 185 0.96

3 15 4.1e-06 0.06 13.1 16.7 3 18 200 215 199 216 0.94

4 15 0.00012 1.8 8.4 12.8 1 18 252 269 252 270 0.91

5 15 1 1.5e+04 -4.6 1.4 6 10 273 277 273 277 0.91

6 15 6.8e-08 0.001 18.8 11.7 1 19 310 328 310 328 0.92

7 15 0.1 1.5e+03 -0.9 0.4 5 10 359 364 359 365 0.90

8 15 0.00027 4 7.3 13.0 4 18 377 391 370 392 0.86

9 15 0.89 1.3e+04 -4.0 2.5 5 10 418 423 418 423 0.94

10 15 0.00067 9.9 6.0 6.4 1 11 429 439 429 440 0.95

11 15 0.36 5.3e+03 -2.7 2.0 4 10 444 450 443 450 0.91

12 15 4.2e-08 0.00062 19.5 8.8 1 18 456 473 456 474 0.91

13 15 0.49 7.2e+03 -3.1 10.1 1 18 513 530 513 531 0.89

14 15 0.031 4.5e+02 0.7 20.2 1 19 567 587 557 591 0.76

15 15 3.7e-05 0.54 10.1 13.6 1 17 597 612 597 616 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.76	1.1e+04	-3.7	1.6	15	19	147	151	146	151	0.81
2	15	0.03	4.5e+02	0.7	0.5	4	10	179	185	178	185	0.96
3	15	4.1e-06	0.06	13.1	16.7	3	18	200	215	199	216	0.94
4	15	0.00012	1.8	8.4	12.8	1	18	252	269	252	270	0.91
5	15	1	1.5e+04	-4.6	1.4	6	10	273	277	273	277	0.91
6	15	6.8e-08	0.001	18.8	11.7	1	19	310	328	310	328	0.92
7	15	0.1	1.5e+03	-0.9	0.4	5	10	359	364	359	365	0.90
8	15	0.00027	4	7.3	13.0	4	18	377	391	370	392	0.86
9	15	0.89	1.3e+04	-4.0	2.5	5	10	418	423	418	423	0.94
10	15	0.00067	9.9	6.0	6.4	1	11	429	439	429	440	0.95
11	15	0.36	5.3e+03	-2.7	2.0	4	10	444	450	443	450	0.91
12	15	4.2e-08	0.00062	19.5	8.8	1	18	456	473	456	474	0.91
13	15	0.49	7.2e+03	-3.1	10.1	1	18	513	530	513	531	0.89
14	15	0.031	4.5e+02	0.7	20.2	1	19	567	587	557	591	0.76
15	15	3.7e-05	0.54	10.1	13.6	1	17	597	612	597	616	0.90

Sequence Information

Coding Sequence: ATGCCGAGAACTAGCCGTAAAAGGAATAATCGTCGTAATGAAAGTACAGTTAGGGTTACTTCCAATTTATCAGCAAATGCTCCAGAATTTATTcctatagcgAATGATGAGGCTACTGCTAATCAAAGAGAAGGTTTAGTAATTCAGTCAATGACATTTTGTGGAAGTTCCAGTGCATCGAATAGTAGCGGGAGTAATAGTAACTCAAACTATGCAGCTACTACTATAATTTCTTCTATACCagatgcattaaaaaataagggCCAACGAGATTTGCTTATTAATCTTTTGAACGAAAATAAAGTAGATTGTGTTATATGTTATGAACgggttaaaaatattgaacaaactTGGAACTGTCGTAATTGTTAccaaattatgcatttaaagtGCATAACAGTTTGGTTCATTAAATCTCATGGCAatGCCATTTGGAGATGTCCGGCGTGTCAAAGCGAGGTGACCGGAAAaccaaaatatgtatgttattgCGGCACATTACCCaatccatattttaataatgtggaCATTCCACATTCTTGTGGTCAAGTTTGTGGATTGccaagaaaaaattataatttaaactatgatGATTGTCATCATAAGTGTACACTGCTTTGTCATCCTGGTCCTTGTCCACAATGTGTTGTGCAAGTTATAagATCATGTGGATGTGGAAAAAAACAAGAGTATGCTCTATGTGGTCAGGCAACCCAGATTGTATGCAACAGTAtttgtcttaaaaaattaaactgccAAATCCATGAATGTCAAAAAGTATGTCATGCTAAAGGCTGTGGACCATGTGATAAGGGTTGTCCTCAATTGTGTTTCTGTGGCAAATCTAAACGACAAGTACCATGCACTCCTGAGAATGCCATGGTTTTATATTACAGCTGTGGAAAtctgtgtgaaaaaaaattgtcttgtgAAAATCACTTATGCCAGAAGGTGTGTCATGTTGGTCAATGTGACCCATGTACAGCTTTATCTGTTAATAGATGTCCTTGTGGAAAACGGCCATTGACAGAAGACGAACTTAGTAACCGTACATTATGCATACAGCCAGTACCCACATGTGACCAACCATGTGGAAAACCTCTAGAATGTGGTCCACCAGaaaatccGCATCTGTGTGAACAAAATTGTCATGAAGGCCCATGTGTTCGCTGTgagcttaaaacaaaatatgtatgtaaatgcGGTAGTAGATCTAaggaaataaaatgtaattctgCTACCAGTGAATTGACTTGCAAAAAGAAATGTAACAAgATGATGTCTTGCGGTAAGCATAGATGTATGGTATTATGTTGTAATGCACAAGAGCATATATGTACCAGAACTTGTAATGGACTATTAAACTGCCGTCAACATCGTTGTGAACGCGTTTGTCATTCTGGAAGCTGTTCAATGTGCTATGAAGCAAGTTTTGAAGAGTTGTATTGTCGATGTGGCAATAGCTTTATTTCTCCTCCTATCAGGTGTGGTACACGTCCACCATTATGCACATTACCTTGTTCACGAGAACATGAATGTGGTCATCCAGCTACTCATATATGTCATAATGAAGATGAATGTCCTCCATGTATAGCTCTGACTGAAAAATTGTGTTTTGGTGGCCACGAgTTGCGTTTTGCTATACCATgtcatataaaaaatgtatcatgcgGAATGCCTTGTGGCATTCCACTTCCTTGCAAAAGACACACTTGTACCAAACCATGTCATGCACCGCCATGTAATACCGGTCCATGTCAGTTACCATGCAATTTACCAAAATTGGATTGCAGCCATCCATGCTCCAAACCTTGTCATAATGGTTCATGTCCACCAGTAGCATGCAAAATAATGGTGAGTGTTAGCTGTGTTTGTGGGAATTTGACAGAAGCTAGGATGTGTTCTGACCCTAAGGTGATTGAATATCGTCTTCAAGTTAAAGCACAGTCAATGAGCTTCTTAGACAATATTGTTGACTCGTCGCCAATcataaaatcgtataaaatccTGGAATGTACAACAGAATGCGCTAAATTAGAACGAAATCGTCGGATTGCTCTTGCACTTCAAATCCGCAATCCAGATTTATCTCCTAACGTCACTCCAAGATATTCAGATTTCATGAAAGAATTTGCAAAAAAAGATGCATCATTCTGTAGTTATGTTCATGAAAAACTTGCTGAATTGGTCACTAATGCGAAacaatcTAAACAAAATTCTCGAAGCCATTCATTTGAAGTAATGAAGTATGAAAAGCGGAAATTGATTCACGAGTACAGTGAACATTTTGGGTGTGAATCAGTAGCTTATGACGCTGAACCAAATAGAAATGTTGTCGCTACAGCTCTTAAAGAAAaaTCGTGGCTTCCCAATTATAGTGTGGTAGAAGTTGTTCTACGTGAAAGCGGATGTCCACGAGTCAACCCATTTGCAAGTATTCAAAAAAGAAATACTATTATTCTGAACAAAAAATTCTGa
Protein Sequence: MPRTSRKRNNRRNESTVRVTSNLSANAPEFIPIANDEATANQREGLVIQSMTFCGSSSASNSSGSNSNSNYAATTIISSIPDALKNKGQRDLLINLLNENKVDCVICYERVKNIEQTWNCRNCYQIMHLKCITVWFIKSHGNAIWRCPACQSEVTGKPKYVCYCGTLPNPYFNNVDIPHSCGQVCGLPRKNYNLNYDDCHHKCTLLCHPGPCPQCVVQVIRSCGCGKKQEYALCGQATQIVCNSICLKKLNCQIHECQKVCHAKGCGPCDKGCPQLCFCGKSKRQVPCTPENAMVLYYSCGNLCEKKLSCENHLCQKVCHVGQCDPCTALSVNRCPCGKRPLTEDELSNRTLCIQPVPTCDQPCGKPLECGPPENPHLCEQNCHEGPCVRCELKTKYVCKCGSRSKEIKCNSATSELTCKKKCNKMMSCGKHRCMVLCCNAQEHICTRTCNGLLNCRQHRCERVCHSGSCSMCYEASFEELYCRCGNSFISPPIRCGTRPPLCTLPCSREHECGHPATHICHNEDECPPCIALTEKLCFGGHELRFAIPCHIKNVSCGMPCGIPLPCKRHTCTKPCHAPPCNTGPCQLPCNLPKLDCSHPCSKPCHNGSCPPVACKIMVSVSCVCGNLTEARMCSDPKVIEYRLQVKAQSMSFLDNIVDSSPIIKSYKILECTTECAKLERNRRIALALQIRNPDLSPNVTPRYSDFMKEFAKKDASFCSYVHEKLAELVTNAKQSKQNSRSHSFEVMKYEKRKLIHEYSEHFGCESVAYDAEPNRNVVATALKEKSWLPNYSVVEVVLRESGCPRVNPFASIQKRNTIILNKKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01304545;
90% Identity: iTF_01304545;
80% Identity: -