Mvit011668.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mythimna vitellina
Gene Symbol
lrrfip2
Assembly
GCA_949316375.1
Location
OX438694.1:22956930-22983497[+]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.03 9.1e+02 -0.4 0.7 44 91 54 102 37 107 0.78
2 17 1.4e-68 4.1e-64 217.5 10.1 1 222 122 344 122 347 0.93
3 17 0.0029 87 3.0 0.0 198 222 367 391 349 394 0.84
4 17 0.0029 87 3.0 0.0 198 222 414 438 396 441 0.84
5 17 0.0029 87 3.0 0.0 198 222 461 485 443 488 0.84
6 17 0.0029 87 3.0 0.0 198 222 508 532 490 535 0.84
7 17 0.0029 87 3.0 0.0 198 222 555 579 537 582 0.84
8 17 0.0029 87 3.0 0.0 198 222 602 626 584 629 0.84
9 17 0.0029 87 3.0 0.0 198 222 649 673 631 676 0.84
10 17 0.0029 87 3.0 0.0 198 222 696 720 678 723 0.84
11 17 0.0029 87 3.0 0.0 198 222 743 767 725 770 0.84
12 17 0.0029 87 3.0 0.0 198 222 790 814 772 817 0.84
13 17 0.0029 87 3.0 0.0 198 222 837 861 819 864 0.84
14 17 0.0029 87 3.0 0.0 198 222 884 908 866 911 0.84
15 17 0.0029 87 3.0 0.0 198 222 931 955 913 958 0.84
16 17 3.3e-17 1e-12 48.7 5.1 198 297 978 1069 960 1071 0.80
17 17 1 3e+04 -6.0 15.6 1 49 1068 1115 1068 1141 0.73

Sequence Information

Coding Sequence
ATGGGACAGCGCTCAGAGGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGAGACGCCTTCACTGACGGAGATTTTGGTGATTCCGATGACGAAACAATAGTGGAACGCCTTGATGAAGCTAAGCCTGCTCACATACCGATCAATGAAGCTGTAAAAGATGATATCCAGAAGAGTGCTGCTACTAATGGTCACTCTAATGGTAGTTTAGATGAGCAGACCAGAATGAATGGCCGTAAGAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTGTTATCGGATTTGCGCCGAGACTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGACCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCGCGGGCTGAGGCGCGAGAGATACGCATGCGCGAGCTTGAGAGACAGCAGCGCGAACAGGAGGACCATGCGGACAAGGCATACGATATGTATGCCGGCAAGACTCCAGAGACGGTGGGTCGTCGTGGGGCCACGAGGCTGACGGCGCTCAGCCCGGCCGTGCATTCTCCGAGGCGAAGCTCGGAAGACTCTGTCGATGATGGCTTCAGCATGAAGGACCTAAGGCACGAGTTGAAGGAGGTAGAAGAGAAGTTCCGCAAGGCGATGATCCTGAATGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGTTGCTCAAGGACAGGATAGAGGAACTGCACGAGGAGTACGCGCAACTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGGCTAAAGCGTGAGCACGAGTCCGTGACCCGCGAACTGGGCGCCGCGCGGGACGCCGTGCGCGCGCGGGACGCAGCCGCTGCCGGCGCCGGCTTCGCCTTCGTGGATGCCGCCGCGCTGGAGCCCGCCGCACGGGACGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGGTAACACATTCTACTTAGTACTACTATGTGAGCCCACTGGGCGCGGGGCCGCGGGCGCCGGCGTGGGCGCCGTGCCCGCGCTGGCGCTGGTCACGCAGCAGGCGCACCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTATTGAGTTCGAAGCAAGCGCTAGAGTCGGAAGTTCGCAAGTTGAAGCTGCAGCTCAACGAAGAACGCGCCGCGCGGCAGAACGGAGTCGCCAACCATCACGACCAAGAGTACGAGAATGAACTAGAAACAGTCCGCAAGGCAGTATCGGAGGCAAAGGGTCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCGCGCCTGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACAGAGAATAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCGAAGTCTGCACTCCTCAAAGACCTGTGA
Protein Sequence
MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAVKDDIQKSAATNGHSNGSLDEQTRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSMKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELGAARDAVRARDAAAAGAGFAFVDAAALEPAARDAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLGNTFYLVLLCEPTGRGAAGAGVGAVPALALVTQQAHQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-