Mvit018775.1
Basic Information
- Insect
- Mythimna vitellina
- Gene Symbol
- -
- Assembly
- GCA_949316375.1
- Location
- OX438702.1:18985374-18986232[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-07 7.8e-05 23.0 0.0 5 39 1 35 1 40 0.92 2 2 1.5 1.2e+03 0.0 0.0 19 34 102 117 93 125 0.72
Sequence Information
- Coding Sequence
- ATGAACCTAGCCATTGAATCAGTGCGTAAAAATAAAGCAGGTTTGAATGAGGCAAGTAGGATGTATGTAGTGCCTAAAGCCACACTAAAACGAAGATTGGATGGTGTGAATCAAAAGGCTAAGGAACATGTTCAAATAGTAGGATCTGAAGGTAAAAATTGGTACTATGCGTTCATGAAGCGGCATCCACAATTAAGTTTGAGACAACCAAGAGCAACTTCAATGAGCCGGGCTACTGGATTTAACAAACCTGCTGTAACCGATTTCTTCAATAAATTAGAGGCAGTATGCGAAAAACACAACATAACAGAAGCGCAGCGTATCTTCAACGTTGATGAGACGGGCTTGTCAACTGTCCAGaggaaaacaagaaaaatactgGCATTAAAAGGTAAGCGGCAAGTTGGAGCTATTACTAGTGGAGAACGCGGTACAAATACTACAGCCGTATGTTGTGCTAATGCTGCTGGTAATTTTATACCACCGCTTATAATATTTAAGCGCAAGAGAGCAAAAGACGAACTCAGGGATGGAGCTCCACCTGGTACAATATTTGCTTTTAATCCAGAGAGTGGATATATTAACAAagacatattttatttgtggttacAACACTTTATTGAGTCTGTGAAGCCGACAactgaaaaaaatgtattacttCTGTTAGATGATGACCATCTAACAGAAGTAAGCTAG
- Protein Sequence
- MNLAIESVRKNKAGLNEASRMYVVPKATLKRRLDGVNQKAKEHVQIVGSEGKNWYYAFMKRHPQLSLRQPRATSMSRATGFNKPAVTDFFNKLEAVCEKHNITEAQRIFNVDETGLSTVQRKTRKILALKGKRQVGAITSGERGTNTTAVCCANAAGNFIPPLIIFKRKRAKDELRDGAPPGTIFAFNPESGYINKDIFYLWLQHFIESVKPTTEKNVLLLLDDDHLTEVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00850605;
- 90% Identity
- -
- 80% Identity
- -