Basic Information

Insect: Mythimna separata
Gene Symbol: -
Assembly: GCA_030763345.1
Location: JAKKIA010000036.1:3489548-3491839[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.7e-12 4.5e-09 36.9 0.0 1 37 8 44 8 46 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.7e-12	4.5e-09	36.9	0.0	1	37	8	44	8	46	0.93

Sequence Information

Coding Sequence: ATGCCAAAGATACCGCAATATACCAAAGAACAATTAGACAAAGCTTTAGAAGACGTTAGTCAAGGTATATCAGTTCGTACAGCAGCCAAAAAGTATGGTATACCTAGAGCAACActacaatttaaattgaaacaCCCGGATAGCAAGAGTGAATTTGGACCAGAACCCTACTTGACTAGAGAAGAAGAAAAACAGTTAGAAGAATGGCTGTGCGATATGGGCAAAAGAGGGTTTCCTATAAATGCCGAAGATATTCTAGATTCTGTTCAAAACTTTCTGAATAAAAACCCCAGAGAGACTCCGTTCAGCGAAAATAGACCTGGAAAAGGATGGTTAAAAGGTTTTCTGAAACGCCATCCTAGAATAACCAAAAGAACGTGTGAAGCTGTTACGCAGGCGAGTGCATGTGTATCCGAATCTGACATCAGAAACTGGTTTGGTCAAATCATGGATCAGATAAACAAGTCTAATCTAACCCACATTTTAGATGACCCTTCCAGAATTTTTAATGCTGATGAAAGCGGTTTTCAGACCTGTCCATCTACCGGAAAAGTCTTTGCTGAAAAAGGAGAGAAGAAGGTCTACATTATCGATAAAGGAaaagccaaagaaaatatgacaGTACTTTTTACAATATCGGCTGATGGACAGATGGTGTTGCCTACGATTGTGTACCCCTATCAACGTTTACCTGAGAGAATCAAACAAACTGTACCTGATGACTGGGGTGTAGCAACTAGCAGTTCAGGATGGATGACGGCGGatacatttaaatatattatcgaGCATGTTTTTCACCcttttttagtgaaaaataaCATCCAGCTACcagttttgttgtttgttgacGGACACAAATCTCATTTAACCTACGACCTAAGTGTACTAGCTCGCTCTCTTCAAATAGAAATATTTGCTCTGTATCCAAACGCCACTAGGATTCTTCAGCCAGCTGATGTGTCACTATTTAGACCCGTAAAACAGTTCTGGAAATCGGCAGTTAGAGAATGGTTGCTAGAGAACATTGGTGAAGTTGTTTCTAAGCAAAATTTTGCTTTCGTTCTAAGAAAAGTTACAGACAAAATTAGTTCTGCCTGCATTGTAAATGGCTTTCGAGCTTGCGGTCTCTACCCTTTTGATCCAAATGCTGTCGATTATTCTAAATGCTTAGCAAAGTCAGCATCCAGATCTAAAGACACTGTAGACATTTTAAATGATGAACTTGAAAAATTACTATCATTGACAAAATTTTCTGAAATCGTAGGTGTAGAGATAATTAACAAATttcatcaatttaaaaatataatgcaaGATGTCCAAAACAACGAATCATTTTTCACTCTTTATCAAATATGGAATTTTTATCATTCGAATACGTTAAATACGATAGAGAATACTAATGAAAATATGACAGAGACTACTAATGAAAATACGACAGAGAATACTAATGAAAATGAGGAAGGAGAATATAATGACATGGAACCAGAACCGACAATTGCACAAGAAGAAAACTTTAACACAacaattataaataacaatatttttgaaaacgaaAGTCAAAATATAATCATAGCAACACACCAAAGCATTGAAAGAATCCAGGATGAAGAACCCTTTACCATTCAACCTTCAAATAATGAACAAATCAACATTACTAGTGATCTACAGAATAACGACCAAGAACTTGTAACTTTAGAAGACCTAGGAATAGCAAATGCAGAAAACCATGAAAGAAACCTACCATCCTGTTCAACAACAAGACTCAAAGATTTTTTATCAATACCTCCAGGACCAACCAGAAAAGGGAAACGTAACACTGAGAGGCTACCTTACCACATATCAGGACCAGAATACCAAaagattttagaagaaaaatCCAAAGAAAAGAATAGACTAGAGGAAGAAAAGAAGGCAAAAAGAGTTGCGAGAGagcaaaaaaaagaagaaagaaagaggAAACTAGaggaaataaagacaaaaaagTTGGAAAAGACTAGAAAAATTGAGTCTATTTCTTGCTGTGGTGTGTGTAAAAGAGTTGTAAAGAGCATAAAATTGAGATGTTGTGAATGTCAGAAAGCATATCATAAATTATGTATTCCTAAATTTCACCTTATGCATATACCTCAGGAggaaggagacaatttcttatGCCATAACTGCTTTTGTACGGAAAATGATGAAAGTATTTCTGAGAACGAGGAGAGTGAAAGTGACGAAGAAAATCaggaatttttaaatataataagatCAGGACAAAAAGAATTAGGTTTGAGCTGCGTAAAATtttaa
Protein Sequence: MPKIPQYTKEQLDKALEDVSQGISVRTAAKKYGIPRATLQFKLKHPDSKSEFGPEPYLTREEEKQLEEWLCDMGKRGFPINAEDILDSVQNFLNKNPRETPFSENRPGKGWLKGFLKRHPRITKRTCEAVTQASACVSESDIRNWFGQIMDQINKSNLTHILDDPSRIFNADESGFQTCPSTGKVFAEKGEKKVYIIDKGKAKENMTVLFTISADGQMVLPTIVYPYQRLPERIKQTVPDDWGVATSSSGWMTADTFKYIIEHVFHPFLVKNNIQLPVLLFVDGHKSHLTYDLSVLARSLQIEIFALYPNATRILQPADVSLFRPVKQFWKSAVREWLLENIGEVVSKQNFAFVLRKVTDKISSACIVNGFRACGLYPFDPNAVDYSKCLAKSASRSKDTVDILNDELEKLLSLTKFSEIVGVEIINKFHQFKNIMQDVQNNESFFTLYQIWNFYHSNTLNTIENTNENMTETTNENTTENTNENEEGEYNDMEPEPTIAQEENFNTTIINNNIFENESQNIIIATHQSIERIQDEEPFTIQPSNNEQINITSDLQNNDQELVTLEDLGIANAENHERNLPSCSTTRLKDFLSIPPGPTRKGKRNTERLPYHISGPEYQKILEEKSKEKNRLEEEKKAKRVAREQKKEERKRKLEEIKTKKLEKTRKIESISCCGVCKRVVKSIKLRCCECQKAYHKLCIPKFHLMHIPQEEGDNFLCHNCFCTENDESISENEESESDEENQEFLNIIRSGQKELGLSCVKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00122297;
90% Identity: iTF_01221441; iTF_01332481; iTF_00850567; iTF_00041710; iTF_01525872; iTF_00042553; iTF_01221440; iTF_01332480; iTF_00850563; iTF_00850566; iTF_00120431; iTF_00120432; iTF_00120438; iTF_01526981; iTF_00809991; iTF_00122297; iTF_00850564; iTF_00906985; iTF_00038641; iTF_00120433; iTF_00120434; iTF_00120435; iTF_00120436; iTF_00120437; iTF_00041716; iTF_00237403;
80% Identity: -