Basic Information

Insect: Mythimna pallens
Gene Symbol: -
Assembly: GCA_961205895.1
Location: OY540851.1:4392670-4395021[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0041 4.2 8.4 0.9 18 43 9 31 5 32 0.93

2 18 0.63 6.6e+02 1.4 1.3 18 44 37 60 33 60 0.69

3 18 0.0013 1.4 10.0 0.1 18 43 68 90 65 91 0.87

4 18 5.4e-05 0.056 14.4 1.6 17 44 98 122 95 122 0.91

5 18 0.00058 0.61 11.1 1.2 18 44 129 152 127 152 0.94

6 18 7.2e-05 0.076 14.0 1.2 15 43 157 182 153 183 0.89

7 18 0.004 4.2 8.4 0.3 17 44 188 212 184 212 0.89

8 18 0.0019 1.9 9.5 0.3 16 44 218 243 213 243 0.85

9 18 0.19 2e+02 3.0 0.1 19 44 256 278 245 278 0.79

10 18 0.27 2.8e+02 2.6 1.2 13 43 298 325 282 326 0.79

11 18 3.6 3.7e+03 -1.0 0.6 18 31 333 351 330 356 0.73

12 18 1.2 1.3e+03 0.5 0.4 15 26 359 370 353 377 0.83

13 18 0.1 1.1e+02 3.9 3.7 17 43 406 429 398 430 0.89

14 18 0.0031 3.2 8.8 3.5 6 43 453 487 447 488 0.83

15 18 0.09 94 4.1 0.8 17 44 493 517 489 517 0.85

16 18 0.58 6.1e+02 1.5 0.8 18 28 524 534 519 547 0.82

17 18 3.2 3.4e+03 -0.9 0.6 19 43 555 576 550 577 0.75

18 18 0.00017 0.18 12.8 2.0 6 43 606 642 605 643 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0041	4.2	8.4	0.9	18	43	9	31	5	32	0.93
2	18	0.63	6.6e+02	1.4	1.3	18	44	37	60	33	60	0.69
3	18	0.0013	1.4	10.0	0.1	18	43	68	90	65	91	0.87
4	18	5.4e-05	0.056	14.4	1.6	17	44	98	122	95	122	0.91
5	18	0.00058	0.61	11.1	1.2	18	44	129	152	127	152	0.94
6	18	7.2e-05	0.076	14.0	1.2	15	43	157	182	153	183	0.89
7	18	0.004	4.2	8.4	0.3	17	44	188	212	184	212	0.89
8	18	0.0019	1.9	9.5	0.3	16	44	218	243	213	243	0.85
9	18	0.19	2e+02	3.0	0.1	19	44	256	278	245	278	0.79
10	18	0.27	2.8e+02	2.6	1.2	13	43	298	325	282	326	0.79
11	18	3.6	3.7e+03	-1.0	0.6	18	31	333	351	330	356	0.73
12	18	1.2	1.3e+03	0.5	0.4	15	26	359	370	353	377	0.83
13	18	0.1	1.1e+02	3.9	3.7	17	43	406	429	398	430	0.89
14	18	0.0031	3.2	8.8	3.5	6	43	453	487	447	488	0.83
15	18	0.09	94	4.1	0.8	17	44	493	517	489	517	0.85
16	18	0.58	6.1e+02	1.5	0.8	18	28	524	534	519	547	0.82
17	18	3.2	3.4e+03	-0.9	0.6	19	43	555	576	550	577	0.75
18	18	0.00017	0.18	12.8	2.0	6	43	606	642	605	643	0.78

Sequence Information

Coding Sequence: ATGTATCAAAATCAGCTAGATTTCGTATGCGACTACTGCTCGAGGACTTTCACAAGAAAATATAACTTGCAAACTCATATAGAAAACTGTCATATCAATTCTTCTTGTCACTGTGACATTTGTAGCCAGAACTTTGGCAGTCCGGCTGGGTTACTGCAACATCTCTCTCGAGGACACAATAACTATGGCCAGCCGTTCCCAGAGTGTGAACTTTGCGGGCGAATCTTCACACGAAAACAGAACATCACATCCCATATGATAACAGTACATCTACAAGGCTTAGGATACGAAATAAAGTGTCGTTTGTGCGAGAAAACTTTCACAACAGAACGGAATTTGAAAAGACATATGAACCAGCTACATAATCCCGATGTTGAGTACCCAACATGCAACGATTGTCACAAAGTTTTCAAAGGAAAACACTCGCTCATAGCCCATATTCAGTCAGTTCACAATGTGAGCGAAAAAGATGCTATCAAGTGCCATTTGTGTGAAAAAGTTTACACTAACAACAGGAACTTGAAGAGACATATTGAAATGTTTCATGGCGAAAAGGGTGAGTTCAGATGTGACATTTGCCCAAAAGTATACACTTCTAACCAAAGCTTGCGACGCCATGCAAGAACAAGACACAGTACAGACAACCAGGAAAATTTGACTTGTAATTTTTGTATGAAAGTTATAATCGGACGCGAAAACTTCGAAAGCCATATACAATTTCACCACCAAGACACCGAAATGGATGTTAAAAACGCTGAATTCTCTTGCGAATCATGTGACAAGAGCTTCGATGAAGAACCTTGTTTGCGACAGCACGTGAAAACTGAACATTCGTTTAAAACATTCTATAAGTATTGCAGGAAATCGCTGCTTAAACAATACGGGATGGACACGAGGACTATATACAACTGTGAATTTTGCCACAATTCTTTCCTAACCGTCTACGAGCTTAAAGACCATATGCGTGTGAACCATGATATCGAGTACTCTCTATCAACTTGCAACGTCTGCTTCAATAAGTTTTACAGTAAAGAGACTATGTCTATACACAGAACTGTGTGTTTACCACCGGCTAATGTGAACTCTTGCAGTCACTGCGACAAGCTCTTCACTGATATTTCCAGTTTAGACTTTCATACGCGAATTTTTCACCCACAAGCTCAAATAGCTGATTCCAACATATCGTCTACAAACATCGATGAGGAAGCCGTTTCATTCAAATGCGAACATTGTGACCGTATTTATTATAGCGATAGATCTCTTAAACATCATATTAAACTAAAACACACGACTGACGAAGAGGTAGAATGCGAATTGTGCGGTAAACTCTGCAGTAACAAATACTACCTGGCCTCTCATGTTAAGATAGTCCATAACAACGATTCTTGGTCTCGATGCGAATACTGTGATAAACAATTTAAATCTAAAAGAAATATTAGAAGGCATATTGAGTACACTCATTTGGGTATGCAAAGATACAAGTGTATCGAGTGTGAGACTTTGTTTAAAGAAAAACGGAGCCTAAGAAAACATGTCAGAACGAAGCATCCGAATTCGGCGTCTTTCCCGCAGTGCCATATTTGTCATAAACGGTTCGAATCGGCGAAATCTTGCAAAATTCATCTGAAACTTTTACATTCATTTAACATGAATACGTATCCATGTCACCTTTGCTCCGTATCGTTCAGTTCAAACGAAGCTTTGAGTATTCACCTCGAGACGAAACATCTAGCCGAAGATCAGAtatacaaatgtgaagaatgcaACTTAGTATTTAGAGGACAGGAAAAATTTGACGCTCACAACGATGTCTGTCACGTCAATTTGGTCCCAAGTATCAAACAGAAAGTTCTGCCAAGATGCATTCTCTGTATGAAAGATTTTAGTACAAGGAAAACTTTGAAGCGTCATATAAAGAAATTCCATGACGAATTCGACGTGGATGAGTTGGCAACTTTCGGTTCTAGGCGGAGGACTTTCACTGTGGATTGCGAGGATTGTATTAAGAGCTTCACTGACGATTCTCATTTGATGGTCTATCATAAACTCAAGCATTTCAAGGACTCGGTGATTTTTAAATGTGCTTCTTGTTTTGAAGCTTACAATGCTTTAGAATTTGCGATCCAGAGGTATAAGGTCCTAAACGCCGATGCTTGTAAGAGCAAAATGATCCTAAGTGAACTCTGCACAACAGAAATGAGTGAGGAAGAAAATGATTTCTCTAACTTTGGGGCGTTACATGACATGTTGCCTGAGAGTACGACCGATGATTTGAATATAAAAATGGAGCCTCTGGAACCTTTGGATGAGACATTTGAGAGGGATGTTAAGATGGAACCAGCTTCGCCGTGA
Protein Sequence: MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCDICSQNFGSPAGLLQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIKCRLCEKTFTTERNLKRHMNQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNVSEKDAIKCHLCEKVYTNNRNLKRHIEMFHGEKGEFRCDICPKVYTSNQSLRRHARTRHSTDNQENLTCNFCMKVIIGRENFESHIQFHHQDTEMDVKNAEFSCESCDKSFDEEPCLRQHVKTEHSFKTFYKYCRKSLLKQYGMDTRTIYNCEFCHNSFLTVYELKDHMRVNHDIEYSLSTCNVCFNKFYSKETMSIHRTVCLPPANVNSCSHCDKLFTDISSLDFHTRIFHPQAQIADSNISSTNIDEEAVSFKCEHCDRIYYSDRSLKHHIKLKHTTDEEVECELCGKLCSNKYYLASHVKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSASFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALSIHLETKHLAEDQIYKCEECNLVFRGQEKFDAHNDVCHVNLVPSIKQKVLPRCILCMKDFSTRKTLKRHIKKFHDEFDVDELATFGSRRRTFTVDCEDCIKSFTDDSHLMVYHKLKHFKDSVIFKCASCFEAYNALEFAIQRYKVLNADACKSKMILSELCTTEMSEEENDFSNFGALHDMLPESTTDDLNIKMEPLEPLDETFERDVKMEPASP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447464;
90% Identity: iTF_01230865;
80% Identity: iTF_01029478;